Gene annotation
Transcriptome id Sobic.006G258700.1,Sobic.006G258700.2
Synonym Sb06g032180, IM, IM1
Functional annotation Alternative oxidase family protein (PubMedID : 26465154)
immutans protein, putative, expressed
UniProt C5YA20 , C5YA16
Pfam PF01786
Panther DB PTHR31803:SF10 PTHR31803 PTHR31803 PTHR31803:SF10
NCBI CDD -
KEGG Orthology K17893; AOX1, ubiquinol oxidase
Gene Ontology GO:0009916; alternative oxidase activity GO:0009916alternative oxidase activity


Orthologs (automatic annotation)
TAIR AT4G22260 : Alternative oxidase family protein
RAP-DB (Rice) LOC_Os04g57320.1 : immutans protein, putative, expressed
MaizeGDB (Corn) Zm00025a009383 , Zm00025a009382
Brachypodium -
Barley -
Wheat -
Populus PNT11438


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cDNA sequences
Sobic.006G258700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G014300 expressed protein -
2 Sobic.010G269400 DNL zinc finger domain containing protein, putative, expressed -
3 Sobic.004G298900 OR, putative, expressed -
4 Sobic.001G351400 Metacaspase 1("PubMedID : 26759170,PubMedID : 24597475")@ICE-like protease p20 domain containing protein, putative, expressed -
5 Sobic.003G037300 Twin LOV 1, putative, expressed -
6 Sobic.010G189200 pentatricopeptide, putative, expressed -
7 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
8 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
9 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
10 Sobic.001G512500 expressed protein -
11 Sobic.005G175500 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
12 Sobic.003G007700 ethylene-responsive protein related, putative, expressed -
13 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
14 Sobic.002G136100 genetic modifier, putative, expressed -
15 Sobic.004G151500 AP2 domain containing protein, expressed -
16 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
17 Sobic.010G058200 sulfiredoxin-1, putative, expressed K12260: sulfiredoxin
18 Sobic.010G184600 Homologous to Arabidopsis heme oxygenase 1 (AtHO1)(PubMedID : 11402195)@heme oxygenase 1, putative, expressed K00510: heme oxygenase 1
19 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
20 Sobic.004G154400 drought-induced protein 1, putative, expressed -


Gene co-expression network
sample Sobic006G258700 Sobic006G258700 Sobic003G014300 Sobic003G014300 Sobic006G258700--Sobic003G014300 Sobic010G269400 Sobic010G269400 Sobic006G258700--Sobic010G269400 Sobic004G298900 Sobic004G298900 Sobic006G258700--Sobic004G298900 Sobic001G351400 Sobic001G351400 Sobic006G258700--Sobic001G351400 Sobic003G037300 Sobic003G037300 Sobic006G258700--Sobic003G037300 Sobic010G189200 Sobic010G189200 Sobic006G258700--Sobic010G189200 Sobic004G300000 Sobic004G300000 Sobic006G258700--Sobic004G300000 Sobic001G286600 Sobic001G286600 Sobic006G258700--Sobic001G286600 Sobic001G404500 Sobic001G404500 Sobic006G258700--Sobic001G404500 Sobic003G014300--Sobic006G258700 Sobic003G014300--Sobic004G298900 Sobic003G014300--Sobic010G269400 Sobic003G014300--Sobic004G300000 Sobic003G014300--Sobic003G037300 Sobic001G512500 Sobic001G512500 Sobic003G014300--Sobic001G512500 Sobic005G175500 Sobic005G175500 Sobic003G014300--Sobic005G175500 Sobic010G035500 Sobic010G035500 Sobic003G014300--Sobic010G035500 Sobic004G151500 Sobic004G151500 Sobic003G014300--Sobic004G151500 Sobic010G269400--Sobic001G286600 Sobic010G269400--Sobic006G258700 Sobic010G140600 Sobic010G140600 Sobic010G269400--Sobic010G140600 Sobic010G058200 Sobic010G058200 Sobic010G269400--Sobic010G058200 Sobic010G269400--Sobic003G037300 Sobic010G269400--Sobic003G014300 Sobic002G102200 Sobic002G102200 Sobic010G269400--Sobic002G102200 Sobic006G110900 Sobic006G110900 Sobic010G269400--Sobic006G110900 Sobic009G062400 Sobic009G062400 Sobic010G269400--Sobic009G062400 Sobic004G298900--Sobic003G037300 Sobic004G298900--Sobic009G062400 Sobic004G298900--Sobic006G258700 Sobic008G006100 Sobic008G006100 Sobic004G298900--Sobic008G006100 Sobic004G298900--Sobic003G014300 Sobic004G298900--Sobic002G102200 Sobic005G111550 Sobic005G111550 Sobic004G298900--Sobic005G111550 Sobic004G298900--Sobic004G151500 Sobic006G260800 Sobic006G260800 Sobic004G298900--Sobic006G260800 Sobic001G351400--Sobic006G258700 Sobic009G189000 Sobic009G189000 Sobic001G351400--Sobic009G189000 Sobic001G102300 Sobic001G102300 Sobic001G351400--Sobic001G102300 Sobic002G362100 Sobic002G362100 Sobic001G351400--Sobic002G362100 Sobic010G207500 Sobic010G207500 Sobic001G351400--Sobic010G207500 Sobic001G351400--Sobic001G404500 Sobic010G184600 Sobic010G184600 Sobic001G351400--Sobic010G184600 Sobic003G410900 Sobic003G410900 Sobic001G351400--Sobic003G410900 Sobic001G525900 Sobic001G525900 Sobic001G351400--Sobic001G525900 Sobic003G037300--Sobic004G298900 Sobic003G037300--Sobic009G062400 Sobic003G037300--Sobic008G006100 Sobic003G037300--Sobic010G269400 Sobic009G207900 Sobic009G207900 Sobic003G037300--Sobic009G207900 Sobic004G154400 Sobic004G154400 Sobic003G037300--Sobic004G154400 Sobic010G076800 Sobic010G076800 Sobic003G037300--Sobic010G076800 Sobic001G521200 Sobic001G521200 Sobic003G037300--Sobic001G521200 Sobic003G037300--Sobic001G286600 Sobic001G450600 Sobic001G450600 Sobic010G189200--Sobic001G450600 Sobic008G063200 Sobic008G063200 Sobic010G189200--Sobic008G063200 Sobic010G189200--Sobic004G298900 Sobic010G189200--Sobic006G258700 Sobic006G214700 Sobic006G214700 Sobic010G189200--Sobic006G214700 Sobic004G183800 Sobic004G183800 Sobic010G189200--Sobic004G183800 Sobic010G189200--Sobic003G014300 Sobic004G333400 Sobic004G333400 Sobic010G189200--Sobic004G333400 Sobic010G189200--Sobic002G102200 Sobic004G300000--Sobic010G035500 Sobic002G025700 Sobic002G025700 Sobic004G300000--Sobic002G025700 Sobic006G193200 Sobic006G193200 Sobic004G300000--Sobic006G193200 Sobic004G300000--Sobic006G214700 Sobic003G108900 Sobic003G108900 Sobic004G300000--Sobic003G108900 Sobic010G197000 Sobic010G197000 Sobic004G300000--Sobic010G197000 Sobic004G165900 Sobic004G165900 Sobic004G300000--Sobic004G165900 Sobic004G300000--Sobic003G014300 Sobic002G354600 Sobic002G354600 Sobic004G300000--Sobic002G354600 Sobic001G286600--Sobic004G154400 Sobic001G286600--Sobic009G062400 Sobic001G286600--Sobic010G269400 Sobic001G286600--Sobic010G058200 Sobic001G118400 Sobic001G118400 Sobic001G286600--Sobic001G118400 Sobic003G328100 Sobic003G328100 Sobic001G286600--Sobic003G328100 Sobic006G155500 Sobic006G155500 Sobic001G286600--Sobic006G155500 Sobic001G286600--Sobic006G110900 Sobic003G070900 Sobic003G070900 Sobic001G286600--Sobic003G070900 Sobic006G123500 Sobic006G123500 Sobic001G404500--Sobic006G123500 Sobic004G063200 Sobic004G063200 Sobic001G404500--Sobic004G063200 Sobic002G281000 Sobic002G281000 Sobic001G404500--Sobic002G281000 Sobic008G063100 Sobic008G063100 Sobic001G404500--Sobic008G063100 Sobic001G404500--Sobic001G525900 Sobic001G404500--Sobic003G410900 Sobic004G268500 Sobic004G268500 Sobic001G404500--Sobic004G268500 Sobic001G404500--Sobic009G189000 Sobic004G099700 Sobic004G099700 Sobic001G404500--Sobic004G099700
Octagon: transcription factors


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