Gene annotation
Transcriptome id Sobic.003G007700.1
Synonym
Functional annotation ethylene-responsive protein related, putative, expressed
UniProt C6JSA4 , A0A1B6Q0N7 , A0A109ND93
Pfam -
Panther DB PTHR16223 PTHR16223:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G29100 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os05g14010.1 : ethylene-responsive protein related, putative, expressed
MaizeGDB (Corn) Zm00025a022826
Brachypodium KQK06982
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
2 Sobic.010G269400 DNL zinc finger domain containing protein, putative, expressed -
3 Sobic.005G012200 STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
4 Sobic.002G200700 expressed protein -
5 Sobic.001G351400 Metacaspase 1("PubMedID : 26759170,PubMedID : 24597475")@ICE-like protease p20 domain containing protein, putative, expressed -
6 Sobic.002G136100 genetic modifier, putative, expressed -
7 Sobic.009G034600 expressed protein -
8 Sobic.003G014300 expressed protein -
9 Sobic.010G058200 sulfiredoxin-1, putative, expressed K12260: sulfiredoxin
10 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
11 Sobic.003G037300 Twin LOV 1, putative, expressed -
12 Sobic.010G140600 bolA, putative, expressed -
13 Sobic.010G184600 Homologous to Arabidopsis heme oxygenase 1 (AtHO1)(PubMedID : 11402195)@heme oxygenase 1, putative, expressed K00510: heme oxygenase 1
14 Sobic.001G517700 catalase domain containing protein, expressed K03781: katE, CAT, catB, catalase
15 Sobic.004G201700 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
16 Sobic.003G343500 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
17 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
18 Sobic.003G343400 sufB/sufD domain containing protein, putative, expressed -
19 Sobic.007G015500 no apical meristem protein, putative, expressed -
20 Sobic.004G298900 OR, putative, expressed -


Gene co-expression network
sample Sobic003G007700 Sobic003G007700 Sobic006G258700 Sobic006G258700 Sobic003G007700--Sobic006G258700 Sobic010G269400 Sobic010G269400 Sobic003G007700--Sobic010G269400 Sobic005G012200 Sobic005G012200 Sobic003G007700--Sobic005G012200 Sobic002G200700 Sobic002G200700 Sobic003G007700--Sobic002G200700 Sobic001G351400 Sobic001G351400 Sobic003G007700--Sobic001G351400 Sobic002G136100 Sobic002G136100 Sobic003G007700--Sobic002G136100 Sobic009G034600 Sobic009G034600 Sobic003G007700--Sobic009G034600 Sobic003G014300 Sobic003G014300 Sobic003G007700--Sobic003G014300 Sobic010G058200 Sobic010G058200 Sobic003G007700--Sobic010G058200 Sobic006G258700--Sobic003G014300 Sobic006G258700--Sobic010G269400 Sobic004G298900 Sobic004G298900 Sobic006G258700--Sobic004G298900 Sobic006G258700--Sobic001G351400 Sobic003G037300 Sobic003G037300 Sobic006G258700--Sobic003G037300 Sobic010G189200 Sobic010G189200 Sobic006G258700--Sobic010G189200 Sobic004G300000 Sobic004G300000 Sobic006G258700--Sobic004G300000 Sobic001G286600 Sobic001G286600 Sobic006G258700--Sobic001G286600 Sobic001G404500 Sobic001G404500 Sobic006G258700--Sobic001G404500 Sobic010G269400--Sobic001G286600 Sobic010G269400--Sobic006G258700 Sobic010G140600 Sobic010G140600 Sobic010G269400--Sobic010G140600 Sobic010G269400--Sobic010G058200 Sobic010G269400--Sobic003G037300 Sobic010G269400--Sobic003G014300 Sobic002G102200 Sobic002G102200 Sobic010G269400--Sobic002G102200 Sobic006G110900 Sobic006G110900 Sobic010G269400--Sobic006G110900 Sobic009G062400 Sobic009G062400 Sobic010G269400--Sobic009G062400 Sobic005G012200--Sobic003G007700 Sobic003G263001 Sobic003G263001 Sobic005G012200--Sobic003G263001 Sobic003G162100 Sobic003G162100 Sobic005G012200--Sobic003G162100 Sobic001G500800 Sobic001G500800 Sobic005G012200--Sobic001G500800 Sobic001G381200 Sobic001G381200 Sobic005G012200--Sobic001G381200 Sobic003G002600 Sobic003G002600 Sobic005G012200--Sobic003G002600 Sobic005G012200--Sobic002G200700 Sobic005G012200--Sobic001G351400 Sobic005G188600 Sobic005G188600 Sobic005G012200--Sobic005G188600 Sobic003G224100 Sobic003G224100 Sobic002G200700--Sobic003G224100 Sobic002G001000 Sobic002G001000 Sobic002G200700--Sobic002G001000 Sobic002G201900 Sobic002G201900 Sobic002G200700--Sobic002G201900 Sobic002G200700--Sobic003G007700 Sobic006G064200 Sobic006G064200 Sobic002G200700--Sobic006G064200 Sobic002G200700--Sobic010G269400 Sobic002G200700--Sobic002G136100 Sobic006G130000 Sobic006G130000 Sobic002G200700--Sobic006G130000 Sobic002G200700--Sobic006G258700 Sobic001G351400--Sobic006G258700 Sobic009G189000 Sobic009G189000 Sobic001G351400--Sobic009G189000 Sobic001G102300 Sobic001G102300 Sobic001G351400--Sobic001G102300 Sobic002G362100 Sobic002G362100 Sobic001G351400--Sobic002G362100 Sobic010G207500 Sobic010G207500 Sobic001G351400--Sobic010G207500 Sobic001G351400--Sobic001G404500 Sobic010G184600 Sobic010G184600 Sobic001G351400--Sobic010G184600 Sobic003G410900 Sobic003G410900 Sobic001G351400--Sobic003G410900 Sobic001G525900 Sobic001G525900 Sobic001G351400--Sobic001G525900 Sobic004G154400 Sobic004G154400 Sobic002G136100--Sobic004G154400 Sobic006G212800 Sobic006G212800 Sobic002G136100--Sobic006G212800 Sobic009G207900 Sobic009G207900 Sobic002G136100--Sobic009G207900 Sobic002G136100--Sobic010G058200 Sobic002G136100--Sobic001G286600 Sobic003G328100 Sobic003G328100 Sobic002G136100--Sobic003G328100 Sobic002G136100--Sobic009G062400 Sobic003G157900 Sobic003G157900 Sobic002G136100--Sobic003G157900 Sobic007G015500 Sobic007G015500 Sobic002G136100--Sobic007G015500 Sobic008G063200 Sobic008G063200 Sobic009G034600--Sobic008G063200 Sobic003G421400 Sobic003G421400 Sobic009G034600--Sobic003G421400 Sobic009G034600--Sobic010G269400 Sobic009G034600--Sobic001G102300 Sobic003G292600 Sobic003G292600 Sobic009G034600--Sobic003G292600 Sobic009G034600--Sobic006G258700 Sobic006G188000 Sobic006G188000 Sobic009G034600--Sobic006G188000 Sobic009G034600--Sobic010G207500 Sobic010G241300 Sobic010G241300 Sobic009G034600--Sobic010G241300 Sobic003G014300--Sobic006G258700 Sobic003G014300--Sobic004G298900 Sobic003G014300--Sobic010G269400 Sobic003G014300--Sobic004G300000 Sobic003G014300--Sobic003G037300 Sobic001G512500 Sobic001G512500 Sobic003G014300--Sobic001G512500 Sobic005G175500 Sobic005G175500 Sobic003G014300--Sobic005G175500 Sobic010G035500 Sobic010G035500 Sobic003G014300--Sobic010G035500 Sobic004G151500 Sobic004G151500 Sobic003G014300--Sobic004G151500 Sobic010G058200--Sobic001G286600 Sobic010G058200--Sobic006G188000 Sobic010G058200--Sobic004G154400 Sobic010G058200--Sobic002G102200 Sobic010G058200--Sobic009G062400 Sobic010G058200--Sobic010G269400 Sobic010G058200--Sobic010G140600 Sobic006G102000 Sobic006G102000 Sobic010G058200--Sobic006G102000 Sobic010G058200--Sobic002G136100
Octagon: transcription factors


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