Gene annotation
Transcriptome id Sobic.005G012200.6,Sobic.005G012200.5,Sobic.005G012200.9,Sobic.005G012200.3,Sobic.005G012200.7,Sobic.005G012200.8,Sobic.005G012200.4
Synonym ATWNK5, Sb05g001070, ZIK1, WNK5
Functional annotation STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt A0A1B6PPM9 , C5Y3F8
Pfam PF07714
Panther DB PTHR13902 PTHR13902:SF49
NCBI CDD KOG0198; MEKK and related serine/threonine protein kinases
KEGG Orthology K08867; WNK, WNK lysine deficient protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G51630 : with no lysine (K) kinase 4,with no lysine (K) kinase 5
RAP-DB (Rice) LOC_Os11g02305.1,LOC_Os11g02300.1,LOC_Os12g02250.1 : expressed protein,STE_PAK_Ste20_Slob_Wnk.3 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed,CPuORF36 - conserved peptide uORF-containing transcript, expressed
MaizeGDB (Corn) Zm00025a045208 , Zm00025a033301
Brachypodium KQJ92553
Barley HORVU5Hr1G046590.7 , HORVU5Hr1G046590.6 , HORVU5Hr1G046590.5 , HORVU5Hr1G046590.4 , HORVU5Hr1G046590.3 , HORVU5Hr1G046590.2 , HORVU5Hr1G046590.1 , HORVU5Hr1G046590.9 , HORVU5Hr1G046590.8
Wheat TraesCS5D02G145100 , TraesCS2A02G195900 , TraesCS2A02G195900 , TraesCS2B02G223600 , TraesCS2B02G223600 , TraesCS5A02G147500 , TraesCS2D02G203900 , TraesCS2D02G203900 , TraesCS5B02G146100
Populus -


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cDNA sequences
Sobic.005G012200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G007700 ethylene-responsive protein related, putative, expressed -
2 Sobic.003G263001 - -
3 Sobic.003G162100 membrane associated DUF588 domain containing protein, putative, expressed -
4 Sobic.001G500800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-coumarate--CoA ligase-like 7, putative, expressed K01904: 4-coumarate--CoA ligase
5 Sobic.001G381200 vacuolar-sorting receptor precursor, putative, expressed -
6 Sobic.003G002600 -(PubMedID : 23001790)@GLK2(PubMedID : 24676859)@GLK genes are members of the GARP superfamily and functions in a BS or M cell-type specific manner to regulate the proplastid to chloroplast transition(PubMedID : 22968911)@myb-like DNA-binding domain containing protein, expressed -
7 Sobic.002G200700 expressed protein -
8 Sobic.001G351400 Metacaspase 1("PubMedID : 26759170,PubMedID : 24597475")@ICE-like protease p20 domain containing protein, putative, expressed -
9 Sobic.005G188600 - -
10 Sobic.003G403500 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
11 Sobic.004G201700 glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
12 Sobic.006G213500 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
13 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
14 Sobic.003G343500 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
15 Sobic.003G343400 sufB/sufD domain containing protein, putative, expressed -
16 Sobic.008G186400 Leucine-rich repeat transmembrane protein kinase family protein(PubMedID : 26465154)@receptor-like protein kinase HAIKU2 precursor, putative, expressed -
17 Sobic.001G102300 homeobox domain containing protein, expressed -
18 Sobic.004G099700 receptor-like protein kinase 5 precursor, putative, expressed -
19 Sobic.006G135100 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
20 Sobic.001G065600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase


Gene co-expression network
sample Sobic005G012200 Sobic005G012200 Sobic003G007700 Sobic003G007700 Sobic005G012200--Sobic003G007700 Sobic003G263001 Sobic003G263001 Sobic005G012200--Sobic003G263001 Sobic003G162100 Sobic003G162100 Sobic005G012200--Sobic003G162100 Sobic001G500800 Sobic001G500800 Sobic005G012200--Sobic001G500800 Sobic001G381200 Sobic001G381200 Sobic005G012200--Sobic001G381200 Sobic003G002600 Sobic003G002600 Sobic005G012200--Sobic003G002600 Sobic002G200700 Sobic002G200700 Sobic005G012200--Sobic002G200700 Sobic001G351400 Sobic001G351400 Sobic005G012200--Sobic001G351400 Sobic005G188600 Sobic005G188600 Sobic005G012200--Sobic005G188600 Sobic006G258700 Sobic006G258700 Sobic003G007700--Sobic006G258700 Sobic010G269400 Sobic010G269400 Sobic003G007700--Sobic010G269400 Sobic003G007700--Sobic005G012200 Sobic003G007700--Sobic002G200700 Sobic003G007700--Sobic001G351400 Sobic002G136100 Sobic002G136100 Sobic003G007700--Sobic002G136100 Sobic009G034600 Sobic009G034600 Sobic003G007700--Sobic009G034600 Sobic003G014300 Sobic003G014300 Sobic003G007700--Sobic003G014300 Sobic010G058200 Sobic010G058200 Sobic003G007700--Sobic010G058200 Sobic003G263001--Sobic005G012200 Sobic003G403500 Sobic003G403500 Sobic003G263001--Sobic003G403500 Sobic003G397200 Sobic003G397200 Sobic003G263001--Sobic003G397200 Sobic003G263001--Sobic001G500800 Sobic003G263001--Sobic002G200700 Sobic003G224100 Sobic003G224100 Sobic003G263001--Sobic003G224100 Sobic005G110502 Sobic005G110502 Sobic003G263001--Sobic005G110502 Sobic003G263001--Sobic005G188600 Sobic007G141700 Sobic007G141700 Sobic003G263001--Sobic007G141700 Sobic003G162100--Sobic003G002600 Sobic003G162100--Sobic005G012200 Sobic003G343400 Sobic003G343400 Sobic003G162100--Sobic003G343400 Sobic006G213500 Sobic006G213500 Sobic003G162100--Sobic006G213500 Sobic004G131900 Sobic004G131900 Sobic003G162100--Sobic004G131900 Sobic003G162100--Sobic001G351400 Sobic003G162100--Sobic006G258700 Sobic009G195000 Sobic009G195000 Sobic003G162100--Sobic009G195000 Sobic007G189200 Sobic007G189200 Sobic003G162100--Sobic007G189200 Sobic001G488700 Sobic001G488700 Sobic001G500800--Sobic001G488700 Sobic010G196500 Sobic010G196500 Sobic001G500800--Sobic010G196500 Sobic001G500800--Sobic001G381200 Sobic001G500800--Sobic006G213500 Sobic002G001000 Sobic002G001000 Sobic001G500800--Sobic002G001000 Sobic002G187700 Sobic002G187700 Sobic001G500800--Sobic002G187700 Sobic001G500800--Sobic003G403500 Sobic003G302800 Sobic003G302800 Sobic001G500800--Sobic003G302800 Sobic006G175800 Sobic006G175800 Sobic001G500800--Sobic006G175800 Sobic003G229300 Sobic003G229300 Sobic001G381200--Sobic003G229300 Sobic001G381200--Sobic010G196500 Sobic003G343500 Sobic003G343500 Sobic001G381200--Sobic003G343500 Sobic002G193100 Sobic002G193100 Sobic001G381200--Sobic002G193100 Sobic001G381200--Sobic001G500800 Sobic003G086900 Sobic003G086900 Sobic001G381200--Sobic003G086900 Sobic004G169000 Sobic004G169000 Sobic001G381200--Sobic004G169000 Sobic001G476700 Sobic001G476700 Sobic001G381200--Sobic001G476700 Sobic004G118200 Sobic004G118200 Sobic001G381200--Sobic004G118200 Sobic003G002600--Sobic003G162100 Sobic003G002600--Sobic003G403500 Sobic001G236400 Sobic001G236400 Sobic003G002600--Sobic001G236400 Sobic003G002600--Sobic004G131900 Sobic003G002600--Sobic005G012200 Sobic006G065900 Sobic006G065900 Sobic003G002600--Sobic006G065900 Sobic002G201900 Sobic002G201900 Sobic003G002600--Sobic002G201900 Sobic004G251300 Sobic004G251300 Sobic003G002600--Sobic004G251300 Sobic001G414000 Sobic001G414000 Sobic003G002600--Sobic001G414000 Sobic002G200700--Sobic003G224100 Sobic002G200700--Sobic002G001000 Sobic002G200700--Sobic002G201900 Sobic002G200700--Sobic003G007700 Sobic006G064200 Sobic006G064200 Sobic002G200700--Sobic006G064200 Sobic002G200700--Sobic010G269400 Sobic002G200700--Sobic002G136100 Sobic006G130000 Sobic006G130000 Sobic002G200700--Sobic006G130000 Sobic002G200700--Sobic006G258700 Sobic001G351400--Sobic006G258700 Sobic009G189000 Sobic009G189000 Sobic001G351400--Sobic009G189000 Sobic001G102300 Sobic001G102300 Sobic001G351400--Sobic001G102300 Sobic002G362100 Sobic002G362100 Sobic001G351400--Sobic002G362100 Sobic010G207500 Sobic010G207500 Sobic001G351400--Sobic010G207500 Sobic001G404500 Sobic001G404500 Sobic001G351400--Sobic001G404500 Sobic010G184600 Sobic010G184600 Sobic001G351400--Sobic010G184600 Sobic003G410900 Sobic003G410900 Sobic001G351400--Sobic003G410900 Sobic001G525900 Sobic001G525900 Sobic001G351400--Sobic001G525900 Sobic001G065600 Sobic001G065600 Sobic005G188600--Sobic001G065600 Sobic001G158900 Sobic001G158900 Sobic005G188600--Sobic001G158900 Sobic006G188000 Sobic006G188000 Sobic005G188600--Sobic006G188000 Sobic003G443500 Sobic003G443500 Sobic005G188600--Sobic003G443500 Sobic006G114900 Sobic006G114900 Sobic005G188600--Sobic006G114900 Sobic006G101500 Sobic006G101500 Sobic005G188600--Sobic006G101500 Sobic008G115900 Sobic008G115900 Sobic005G188600--Sobic008G115900 Sobic001G098301 Sobic001G098301 Sobic005G188600--Sobic001G098301 Sobic006G160400 Sobic006G160400 Sobic005G188600--Sobic006G160400
Octagon: transcription factors


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