Gene annotation
Transcriptome id Sobic.008G186400.1
Synonym Sb08g022790
Functional annotation Leucine-rich repeat transmembrane protein kinase family protein (PubMedID : 26465154)
receptor-like protein kinase HAIKU2 precursor, putative, expressed
UniProt C5YSZ0
Pfam PF13855 PF00069
Panther DB PTHR27000 PTHR27000:SF224
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G49660 : Leucine-rich repeat transmembrane protein kinase family protein
RAP-DB (Rice) LOC_Os12g43660.1 : receptor-like protein kinase HAIKU2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a004854 , Zm00025a025091 , Zm00025a001429 , Zm00025a057469 , Zm00025a030297 , Zm00025a023581 , Zm00025a025430 , Zm00025a044003 , Zm00025a044967 , Zm00025a030142
Brachypodium KQJ85659 , KQK02561 , KQK22738 , KQK16712 , KQJ95505 , KQJ98144
Barley HORVU4Hr1G065620.3 , HORVU4Hr1G065620.2 , HORVU4Hr1G065620.1 , HORVU0Hr1G022670.4 , HORVU0Hr1G022670.1 , HORVU0Hr1G022670.3 , HORVU0Hr1G022670.2 , HORVU5Hr1G001730.2 , HORVU5Hr1G001730.3 , HORVU5Hr1G001730.1 , HORVU1Hr1G025040.3 , HORVU1Hr1G025040.4 , HORVU1Hr1G025040.5 , HORVU1Hr1G025040.2 , HORVU1Hr1G025040.1 , HORVU1Hr1G039500.6 , HORVU1Hr1G039500.4 , HORVU1Hr1G039500.5 , HORVU1Hr1G039500.2 , HORVU1Hr1G039500.3 , HORVU1Hr1G039500.1 , HORVU5Hr1G001920.3 , HORVU5Hr1G001920.2 , HORVU5Hr1G001920.1 , HORVU6Hr1G005460.1 , HORVU6Hr1G005460.2
Wheat TraesCS5A02G013100 , TraesCS1B02G167400 , TraesCSU02G152100 , TraesCS3B02G192500 , TraesCS1D02G146700 , TraesCS1B02G479300 , TraesCS1B02G479300 , TraesCS1B02G134100 , TraesCS4D02G235800 , TraesCS1A02G113800 , TraesCS4A02G059000
Populus -


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cDNA sequences
Sobic.008G186400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G241300 -(PubMedID : 26465154)@OsCML29 - Calmodulin-related calcium sensor protein, expressed -
2 Sobic.003G397200 - -
3 Sobic.010G267700 receptor protein kinase CLAVATA1 precursor, putative, expressed -
4 Sobic.005G111500 FHA domain containing protein, putative, expressed -
5 Sobic.001G006400 DANA2, putative, expressed -
6 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
7 Sobic.001G168800 BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
8 Sobic.007G059500 down-regulated TF in developmental senescence(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
9 Sobic.004G227200 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
10 Sobic.008G072700 expressed protein -
11 Sobic.008G183200 LOL3, putative, expressed -
12 Sobic.005G012200 STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
13 Sobic.009G062500 -(PubMedID : 26976818)@triose phosphate/phosphate translocator, non-green plastid,chloroplast precursor, putative, expressed K15283: solute carrier family 35, member E1
14 Sobic.001G240800 tyrosine protein kinase domain containing protein, putative, expressed -
15 Sobic.003G037300 Twin LOV 1, putative, expressed -
16 Sobic.003G443500 cyclase/dehydrase family protein, expressed -
17 Sobic.005G089600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
18 Sobic.010G269400 DNL zinc finger domain containing protein, putative, expressed -
19 Sobic.007G223500 expressed protein -
20 Sobic.008G063200 expressed protein -


Gene co-expression network
sample Sobic008G186400 Sobic008G186400 Sobic010G241300 Sobic010G241300 Sobic008G186400--Sobic010G241300 Sobic003G397200 Sobic003G397200 Sobic008G186400--Sobic003G397200 Sobic010G267700 Sobic010G267700 Sobic008G186400--Sobic010G267700 Sobic005G111500 Sobic005G111500 Sobic008G186400--Sobic005G111500 Sobic001G006400 Sobic001G006400 Sobic008G186400--Sobic001G006400 Sobic002G102200 Sobic002G102200 Sobic008G186400--Sobic002G102200 Sobic001G168800 Sobic001G168800 Sobic008G186400--Sobic001G168800 Sobic007G059500 Sobic007G059500 Sobic008G186400--Sobic007G059500 Sobic004G227200 Sobic004G227200 Sobic008G186400--Sobic004G227200 Sobic008G183200 Sobic008G183200 Sobic010G241300--Sobic008G183200 Sobic010G241300--Sobic007G059500 Sobic005G127000 Sobic005G127000 Sobic010G241300--Sobic005G127000 Sobic004G122200 Sobic004G122200 Sobic010G241300--Sobic004G122200 Sobic010G241300--Sobic003G397200 Sobic006G010800 Sobic006G010800 Sobic010G241300--Sobic006G010800 Sobic009G034600 Sobic009G034600 Sobic010G241300--Sobic009G034600 Sobic010G241300--Sobic005G111500 Sobic007G213300 Sobic007G213300 Sobic010G241300--Sobic007G213300 Sobic003G397200--Sobic010G241300 Sobic003G397200--Sobic008G186400 Sobic003G397200--Sobic008G183200 Sobic005G188600 Sobic005G188600 Sobic003G397200--Sobic005G188600 Sobic006G102400 Sobic006G102400 Sobic003G397200--Sobic006G102400 Sobic008G187900 Sobic008G187900 Sobic003G397200--Sobic008G187900 Sobic003G397200--Sobic009G034600 Sobic003G263001 Sobic003G263001 Sobic003G397200--Sobic003G263001 Sobic003G397200--Sobic007G059500 Sobic010G267700--Sobic008G186400 Sobic002G367100 Sobic002G367100 Sobic010G267700--Sobic002G367100 Sobic003G375900 Sobic003G375900 Sobic010G267700--Sobic003G375900 Sobic003G403500 Sobic003G403500 Sobic010G267700--Sobic003G403500 Sobic006G002900 Sobic006G002900 Sobic010G267700--Sobic006G002900 Sobic010G267700--Sobic003G397200 Sobic010G267700--Sobic003G263001 Sobic005G012200 Sobic005G012200 Sobic010G267700--Sobic005G012200 Sobic003G422700 Sobic003G422700 Sobic010G267700--Sobic003G422700 Sobic010G076800 Sobic010G076800 Sobic005G111500--Sobic010G076800 Sobic005G111500--Sobic008G183200 Sobic009G062500 Sobic009G062500 Sobic005G111500--Sobic009G062500 Sobic008G063200 Sobic008G063200 Sobic005G111500--Sobic008G063200 Sobic005G111500--Sobic002G102200 Sobic007G076900 Sobic007G076900 Sobic005G111500--Sobic007G076900 Sobic001G186200 Sobic001G186200 Sobic005G111500--Sobic001G186200 Sobic001G006000 Sobic001G006000 Sobic005G111500--Sobic001G006000 Sobic003G037300 Sobic003G037300 Sobic005G111500--Sobic003G037300 Sobic001G295300 Sobic001G295300 Sobic001G006400--Sobic001G295300 Sobic001G308800 Sobic001G308800 Sobic001G006400--Sobic001G308800 Sobic001G006400--Sobic008G063200 Sobic001G006400--Sobic002G102200 Sobic003G291400 Sobic003G291400 Sobic001G006400--Sobic003G291400 Sobic003G008900 Sobic003G008900 Sobic001G006400--Sobic003G008900 Sobic001G447700 Sobic001G447700 Sobic001G006400--Sobic001G447700 Sobic003G439100 Sobic003G439100 Sobic001G006400--Sobic003G439100 Sobic001G006400--Sobic008G186400 Sobic006G101500 Sobic006G101500 Sobic002G102200--Sobic006G101500 Sobic001G391900 Sobic001G391900 Sobic002G102200--Sobic001G391900 Sobic003G387100 Sobic003G387100 Sobic002G102200--Sobic003G387100 Sobic001G124800 Sobic001G124800 Sobic002G102200--Sobic001G124800 Sobic010G058200 Sobic010G058200 Sobic002G102200--Sobic010G058200 Sobic006G050400 Sobic006G050400 Sobic002G102200--Sobic006G050400 Sobic008G006100 Sobic008G006100 Sobic002G102200--Sobic008G006100 Sobic002G102200--Sobic008G063200 Sobic009G059300 Sobic009G059300 Sobic002G102200--Sobic009G059300 Sobic003G412900 Sobic003G412900 Sobic001G168800--Sobic003G412900 Sobic003G439000 Sobic003G439000 Sobic001G168800--Sobic003G439000 Sobic001G134700 Sobic001G134700 Sobic001G168800--Sobic001G134700 Sobic001G168800--Sobic003G387100 Sobic001G168800--Sobic004G227200 Sobic003G378600 Sobic003G378600 Sobic001G168800--Sobic003G378600 Sobic001G168800--Sobic006G101500 Sobic001G469900 Sobic001G469900 Sobic001G168800--Sobic001G469900 Sobic007G085800 Sobic007G085800 Sobic001G168800--Sobic007G085800 Sobic007G059500--Sobic005G127000 Sobic007G059500--Sobic010G241300 Sobic007G059500--Sobic008G183200 Sobic001G498300 Sobic001G498300 Sobic007G059500--Sobic001G498300 Sobic001G377500 Sobic001G377500 Sobic007G059500--Sobic001G377500 Sobic010G218600 Sobic010G218600 Sobic007G059500--Sobic010G218600 Sobic008G063100 Sobic008G063100 Sobic007G059500--Sobic008G063100 Sobic002G281000 Sobic002G281000 Sobic007G059500--Sobic002G281000 Sobic005G021600 Sobic005G021600 Sobic007G059500--Sobic005G021600 Sobic007G223500 Sobic007G223500 Sobic004G227200--Sobic007G223500 Sobic006G093900 Sobic006G093900 Sobic004G227200--Sobic006G093900 Sobic002G316700 Sobic002G316700 Sobic004G227200--Sobic002G316700 Sobic001G035800 Sobic001G035800 Sobic004G227200--Sobic001G035800 Sobic009G143100 Sobic009G143100 Sobic004G227200--Sobic009G143100 Sobic004G227200--Sobic001G168800 Sobic004G175500 Sobic004G175500 Sobic004G227200--Sobic004G175500 Sobic003G387800 Sobic003G387800 Sobic004G227200--Sobic003G387800 Sobic002G030500 Sobic002G030500 Sobic004G227200--Sobic002G030500
Octagon: transcription factors


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