Gene annotation
Transcriptome id Sobic.001G240800.2,Sobic.001G240800.3
Synonym Sb01g021300
Functional annotation tyrosine protein kinase domain containing protein, putative, expressed
UniProt C5X1D1
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF173
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G56460 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os10g29620.1 : tyrosine protein kinase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a039868 , Zm00025a027237 , Zm00025a046021 , Zm00025a018394 , Zm00025a049587 , Zm00025a041769 , Zm00025a025800 , Zm00025a006844 , Zm00025a048740 , Zm00025a049220
Brachypodium PNT67415 , KQK23815 , KQJ96794 , KQK17431
Barley HORVU2Hr1G016720.2 , HORVU2Hr1G016720.3 , HORVU2Hr1G016720.1 , HORVU2Hr1G031710.1 , HORVU2Hr1G031710.2 , HORVU0Hr1G001640.2 , HORVU0Hr1G001640.1 , HORVU3Hr1G115860.6 , HORVU3Hr1G115860.2 , HORVU3Hr1G115860.3 , HORVU3Hr1G115860.1 , HORVU3Hr1G115860.8 , HORVU3Hr1G115860.9 , HORVU4Hr1G025070.2 , HORVU4Hr1G025070.3 , HORVU4Hr1G025070.1 , HORVU7Hr1G096400.4 , HORVU7Hr1G096400.2 , HORVU7Hr1G096400.3 , HORVU7Hr1G096400.1 , HORVU3Hr1G115860.10 , HORVU3Hr1G115860.7
Wheat TraesCS2B02G114900 , TraesCS1A02G138100 , TraesCS3A02G530200 , TraesCS2B02G197000 , TraesCS7B02G316100 , TraesCS7D02G409400 , TraesCS3B02G600300 , TraesCS1B02G149900 , TraesCS1B02G149900 , TraesCS2D02G178100 , TraesCS1D02G134500 , TraesCS3D02G535700 , TraesCS2A02G170600 , TraesCS7D02G165300 , TraesCS2A02G098700 , TraesCS7A02G163300 , TraesCS2D02G098200
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G240800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G096100 expressed protein -
2 Sobic.010G241300 -(PubMedID : 26465154)@OsCML29 - Calmodulin-related calcium sensor protein, expressed -
3 Sobic.005G072200 lipase, putative, expressed -
4 Sobic.001G291200 - -
5 Sobic.004G227300 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
6 Sobic.004G088100 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
7 Sobic.007G179750 - -
8 Sobic.006G102400 transporter family protein, putative, expressed -
9 Sobic.003G264901 - -
10 Sobic.002G376700 EF hand family protein, putative -
11 Sobic.003G359900 C2 domain containing protein, expressed -
12 Sobic.007G059500 down-regulated TF in developmental senescence(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
13 Sobic.008G186400 Leucine-rich repeat transmembrane protein kinase family protein(PubMedID : 26465154)@receptor-like protein kinase HAIKU2 precursor, putative, expressed -
14 Sobic.001G053900 nodulin, putative, expressed -
15 Sobic.008G042500 expressed protein -
16 Sobic.006G053700 ACT domain containing protein, expressed -
17 Sobic.008G183200 LOL3, putative, expressed -
18 Sobic.004G147200 - -
19 Sobic.006G010800 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
20 Sobic.003G291400 dehydrogenase, putative, expressed -


Gene co-expression network
sample Sobic001G240800 Sobic001G240800 Sobic004G096100 Sobic004G096100 Sobic001G240800--Sobic004G096100 Sobic010G241300 Sobic010G241300 Sobic001G240800--Sobic010G241300 Sobic005G072200 Sobic005G072200 Sobic001G240800--Sobic005G072200 Sobic001G291200 Sobic001G291200 Sobic001G240800--Sobic001G291200 Sobic004G227300 Sobic004G227300 Sobic001G240800--Sobic004G227300 Sobic004G088100 Sobic004G088100 Sobic001G240800--Sobic004G088100 Sobic007G179750 Sobic007G179750 Sobic001G240800--Sobic007G179750 Sobic006G102400 Sobic006G102400 Sobic001G240800--Sobic006G102400 Sobic003G264901 Sobic003G264901 Sobic001G240800--Sobic003G264901 Sobic001G102300 Sobic001G102300 Sobic004G096100--Sobic001G102300 Sobic002G001800 Sobic002G001800 Sobic004G096100--Sobic002G001800 Sobic008G152200 Sobic008G152200 Sobic004G096100--Sobic008G152200 Sobic002G371900 Sobic002G371900 Sobic004G096100--Sobic002G371900 Sobic006G279400 Sobic006G279400 Sobic004G096100--Sobic006G279400 Sobic009G034600 Sobic009G034600 Sobic004G096100--Sobic009G034600 Sobic002G281000 Sobic002G281000 Sobic004G096100--Sobic002G281000 Sobic001G452700 Sobic001G452700 Sobic004G096100--Sobic001G452700 Sobic007G191900 Sobic007G191900 Sobic004G096100--Sobic007G191900 Sobic008G183200 Sobic008G183200 Sobic010G241300--Sobic008G183200 Sobic007G059500 Sobic007G059500 Sobic010G241300--Sobic007G059500 Sobic005G127000 Sobic005G127000 Sobic010G241300--Sobic005G127000 Sobic004G122200 Sobic004G122200 Sobic010G241300--Sobic004G122200 Sobic003G397200 Sobic003G397200 Sobic010G241300--Sobic003G397200 Sobic006G010800 Sobic006G010800 Sobic010G241300--Sobic006G010800 Sobic010G241300--Sobic009G034600 Sobic005G111500 Sobic005G111500 Sobic010G241300--Sobic005G111500 Sobic007G213300 Sobic007G213300 Sobic010G241300--Sobic007G213300 Sobic003G359900 Sobic003G359900 Sobic005G072200--Sobic003G359900 Sobic006G052200 Sobic006G052200 Sobic005G072200--Sobic006G052200 Sobic002G073900 Sobic002G073900 Sobic005G072200--Sobic002G073900 Sobic010G080300 Sobic010G080300 Sobic005G072200--Sobic010G080300 Sobic009G190800 Sobic009G190800 Sobic005G072200--Sobic009G190800 Sobic001G351100 Sobic001G351100 Sobic005G072200--Sobic001G351100 Sobic003G402200 Sobic003G402200 Sobic005G072200--Sobic003G402200 Sobic005G072200--Sobic004G096100 Sobic001G314900 Sobic001G314900 Sobic005G072200--Sobic001G314900 Sobic001G053900 Sobic001G053900 Sobic001G291200--Sobic001G053900 Sobic001G291200--Sobic001G240800 Sobic006G053700 Sobic006G053700 Sobic001G291200--Sobic006G053700 Sobic002G376700 Sobic002G376700 Sobic001G291200--Sobic002G376700 Sobic004G096300 Sobic004G096300 Sobic001G291200--Sobic004G096300 Sobic003G284300 Sobic003G284300 Sobic001G291200--Sobic003G284300 Sobic003G108600 Sobic003G108600 Sobic001G291200--Sobic003G108600 Sobic003G391100 Sobic003G391100 Sobic001G291200--Sobic003G391100 Sobic010G214600 Sobic010G214600 Sobic001G291200--Sobic010G214600 Sobic001G427500 Sobic001G427500 Sobic004G227300--Sobic001G427500 Sobic001G261597 Sobic001G261597 Sobic004G227300--Sobic001G261597 Sobic006G171700 Sobic006G171700 Sobic004G227300--Sobic006G171700 Sobic004G227300--Sobic003G359900 Sobic003G299000 Sobic003G299000 Sobic004G227300--Sobic003G299000 Sobic004G214100 Sobic004G214100 Sobic004G227300--Sobic004G214100 Sobic002G259400 Sobic002G259400 Sobic004G227300--Sobic002G259400 Sobic007G062500 Sobic007G062500 Sobic004G227300--Sobic007G062500 Sobic006G119800 Sobic006G119800 Sobic004G227300--Sobic006G119800 Sobic009G082200 Sobic009G082200 Sobic004G088100--Sobic009G082200 Sobic008G125600 Sobic008G125600 Sobic004G088100--Sobic008G125600 Sobic003G386600 Sobic003G386600 Sobic004G088100--Sobic003G386600 Sobic004G088100--Sobic001G240800 Sobic005G222900 Sobic005G222900 Sobic004G088100--Sobic005G222900 Sobic004G088100--Sobic003G264901 Sobic007G054100 Sobic007G054100 Sobic004G088100--Sobic007G054100 Sobic003G368800 Sobic003G368800 Sobic004G088100--Sobic003G368800 Sobic001G429300 Sobic001G429300 Sobic004G088100--Sobic001G429300 Sobic001G093600 Sobic001G093600 Sobic007G179750--Sobic001G093600 Sobic006G273000 Sobic006G273000 Sobic007G179750--Sobic006G273000 Sobic003G107300 Sobic003G107300 Sobic007G179750--Sobic003G107300 Sobic007G014600 Sobic007G014600 Sobic007G179750--Sobic007G014600 Sobic001G005500 Sobic001G005500 Sobic007G179750--Sobic001G005500 Sobic008G101500 Sobic008G101500 Sobic007G179750--Sobic008G101500 Sobic010G246600 Sobic010G246600 Sobic007G179750--Sobic010G246600 Sobic007G179750--Sobic007G191900 Sobic007G179750--Sobic008G152200 Sobic010G164200 Sobic010G164200 Sobic006G102400--Sobic010G164200 Sobic006G102400--Sobic008G183200 Sobic006G102400--Sobic004G122200 Sobic006G102400--Sobic010G241300 Sobic001G217700 Sobic001G217700 Sobic006G102400--Sobic001G217700 Sobic006G051300 Sobic006G051300 Sobic006G102400--Sobic006G051300 Sobic006G249050 Sobic006G249050 Sobic006G102400--Sobic006G249050 Sobic003G052300 Sobic003G052300 Sobic006G102400--Sobic003G052300 Sobic006G102400--Sobic003G397200 Sobic003G264901--Sobic004G096300 Sobic010G172200 Sobic010G172200 Sobic003G264901--Sobic010G172200 Sobic001G293800 Sobic001G293800 Sobic003G264901--Sobic001G293800 Sobic003G264901--Sobic006G053700 Sobic007G071000 Sobic007G071000 Sobic003G264901--Sobic007G071000 Sobic001G377000 Sobic001G377000 Sobic003G264901--Sobic001G377000 Sobic009G205600 Sobic009G205600 Sobic003G264901--Sobic009G205600 Sobic003G153800 Sobic003G153800 Sobic003G264901--Sobic003G153800 Sobic003G264901--Sobic001G053900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.