Gene annotation
Transcriptome id Sobic.001G291200.2
Synonym
Functional annotation -
UniProt A0A1Z5S859
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G291200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G053900 nodulin, putative, expressed -
2 Sobic.001G240800 tyrosine protein kinase domain containing protein, putative, expressed -
3 Sobic.006G053700 ACT domain containing protein, expressed -
4 Sobic.002G376700 EF hand family protein, putative -
5 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
6 Sobic.003G284300 expressed protein -
7 Sobic.003G108600 heat shock protein DnaJ, putative, expressed -
8 Sobic.003G391100 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.010G214600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloride transporter, chloride channel family, putative, expressed K05016: chloride channel 7
10 Sobic.008G152200 DC1 domain-containing protein, putative, expressed -
11 Sobic.009G148900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
12 Sobic.010G245100 lectin-like receptor kinase 1, putative, expressed -
13 Sobic.003G408400 PCF-like (ClassI) Subclade 3 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
14 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
15 Sobic.010G214000 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
16 Sobic.009G189000 expressed protein -
17 Sobic.003G320600 membrane protein, putative, expressed -
18 Sobic.003G264901 - -
19 Sobic.001G465100 hydrolase, alpha/beta fold family domain containing protein, expressed -
20 Sobic.006G273000 AT hook motif domain containing protein, expressed -


Gene co-expression network
sample Sobic001G291200 Sobic001G291200 Sobic001G053900 Sobic001G053900 Sobic001G291200--Sobic001G053900 Sobic001G240800 Sobic001G240800 Sobic001G291200--Sobic001G240800 Sobic006G053700 Sobic006G053700 Sobic001G291200--Sobic006G053700 Sobic002G376700 Sobic002G376700 Sobic001G291200--Sobic002G376700 Sobic004G096300 Sobic004G096300 Sobic001G291200--Sobic004G096300 Sobic003G284300 Sobic003G284300 Sobic001G291200--Sobic003G284300 Sobic003G108600 Sobic003G108600 Sobic001G291200--Sobic003G108600 Sobic003G391100 Sobic003G391100 Sobic001G291200--Sobic003G391100 Sobic010G214600 Sobic010G214600 Sobic001G291200--Sobic010G214600 Sobic001G053900--Sobic004G096300 Sobic001G053900--Sobic002G376700 Sobic010G214000 Sobic010G214000 Sobic001G053900--Sobic010G214000 Sobic001G053900--Sobic001G291200 Sobic003G264901 Sobic003G264901 Sobic001G053900--Sobic003G264901 Sobic004G113800 Sobic004G113800 Sobic001G053900--Sobic004G113800 Sobic006G172900 Sobic006G172900 Sobic001G053900--Sobic006G172900 Sobic008G152200 Sobic008G152200 Sobic001G053900--Sobic008G152200 Sobic007G071000 Sobic007G071000 Sobic001G053900--Sobic007G071000 Sobic004G096100 Sobic004G096100 Sobic001G240800--Sobic004G096100 Sobic010G241300 Sobic010G241300 Sobic001G240800--Sobic010G241300 Sobic005G072200 Sobic005G072200 Sobic001G240800--Sobic005G072200 Sobic001G240800--Sobic001G291200 Sobic004G227300 Sobic004G227300 Sobic001G240800--Sobic004G227300 Sobic004G088100 Sobic004G088100 Sobic001G240800--Sobic004G088100 Sobic007G179750 Sobic007G179750 Sobic001G240800--Sobic007G179750 Sobic006G102400 Sobic006G102400 Sobic001G240800--Sobic006G102400 Sobic001G240800--Sobic003G264901 Sobic006G053700--Sobic004G096300 Sobic010G172200 Sobic010G172200 Sobic006G053700--Sobic010G172200 Sobic007G014600 Sobic007G014600 Sobic006G053700--Sobic007G014600 Sobic009G213400 Sobic009G213400 Sobic006G053700--Sobic009G213400 Sobic006G053700--Sobic003G264901 Sobic002G209100 Sobic002G209100 Sobic006G053700--Sobic002G209100 Sobic002G271600 Sobic002G271600 Sobic006G053700--Sobic002G271600 Sobic001G005500 Sobic001G005500 Sobic006G053700--Sobic001G005500 Sobic007G191900 Sobic007G191900 Sobic006G053700--Sobic007G191900 Sobic001G217700 Sobic001G217700 Sobic002G376700--Sobic001G217700 Sobic002G376700--Sobic001G053900 Sobic005G002600 Sobic005G002600 Sobic002G376700--Sobic005G002600 Sobic001G465100 Sobic001G465100 Sobic002G376700--Sobic001G465100 Sobic003G320600 Sobic003G320600 Sobic002G376700--Sobic003G320600 Sobic002G376700--Sobic010G214000 Sobic010G246600 Sobic010G246600 Sobic002G376700--Sobic010G246600 Sobic002G376700--Sobic004G113800 Sobic002G376700--Sobic001G291200 Sobic004G096300--Sobic010G172200 Sobic001G293800 Sobic001G293800 Sobic004G096300--Sobic001G293800 Sobic001G377000 Sobic001G377000 Sobic004G096300--Sobic001G377000 Sobic004G096300--Sobic009G213400 Sobic004G096300--Sobic003G264901 Sobic004G096300--Sobic006G053700 Sobic004G096300--Sobic001G053900 Sobic004G096300--Sobic007G014600 Sobic004G096300--Sobic008G152200 Sobic009G038200 Sobic009G038200 Sobic003G284300--Sobic009G038200 Sobic006G273000 Sobic006G273000 Sobic003G284300--Sobic006G273000 Sobic003G284300--Sobic001G005500 Sobic001G321600 Sobic001G321600 Sobic003G284300--Sobic001G321600 Sobic001G093600 Sobic001G093600 Sobic003G284300--Sobic001G093600 Sobic001G019300 Sobic001G019300 Sobic003G284300--Sobic001G019300 Sobic006G197800 Sobic006G197800 Sobic003G284300--Sobic006G197800 Sobic005G063900 Sobic005G063900 Sobic003G284300--Sobic005G063900 Sobic003G284300--Sobic007G014600 Sobic003G108600--Sobic010G214000 Sobic009G189000 Sobic009G189000 Sobic003G108600--Sobic009G189000 Sobic003G068800 Sobic003G068800 Sobic003G108600--Sobic003G068800 Sobic001G102300 Sobic001G102300 Sobic003G108600--Sobic001G102300 Sobic010G225600 Sobic010G225600 Sobic003G108600--Sobic010G225600 Sobic006G258700 Sobic006G258700 Sobic003G108600--Sobic006G258700 Sobic006G135100 Sobic006G135100 Sobic003G108600--Sobic006G135100 Sobic003G108600--Sobic004G113800 Sobic001G418700 Sobic001G418700 Sobic003G108600--Sobic001G418700 Sobic003G391100--Sobic001G465100 Sobic003G391100--Sobic006G197800 Sobic008G042500 Sobic008G042500 Sobic003G391100--Sobic008G042500 Sobic003G391100--Sobic003G284300 Sobic003G391100--Sobic001G053900 Sobic003G123300 Sobic003G123300 Sobic003G391100--Sobic003G123300 Sobic003G391100--Sobic004G096300 Sobic003G391100--Sobic010G214000 Sobic010G245100 Sobic010G245100 Sobic003G391100--Sobic010G245100 Sobic001G169200 Sobic001G169200 Sobic010G214600--Sobic001G169200 Sobic003G163500 Sobic003G163500 Sobic010G214600--Sobic003G163500 Sobic010G214600--Sobic001G217700 Sobic008G118000 Sobic008G118000 Sobic010G214600--Sobic008G118000 Sobic003G178700 Sobic003G178700 Sobic010G214600--Sobic003G178700 Sobic010G214600--Sobic001G291200 Sobic008G060150 Sobic008G060150 Sobic010G214600--Sobic008G060150 Sobic010G214600--Sobic002G376700 Sobic007G130100 Sobic007G130100 Sobic010G214600--Sobic007G130100
Octagon: transcription factors


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