Gene annotation
Transcriptome id Sobic.006G273000.1
Synonym Sb06g033450
Functional annotation AT hook motif domain containing protein, expressed
UniProt A0A1B6PP73
Pfam PF03479
Panther DB PTHR31500 PTHR31500:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G45850 : AT hook motif DNA-binding family protein
RAP-DB (Rice) LOC_Os04g58730.1 : AT hook motif domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009243 , Zm00025a057421
Brachypodium -
Barley HORVU2Hr1G123730.2 , HORVU2Hr1G123730.3 , HORVU2Hr1G123730.1
Wheat TraesCS2A02G582300 , TraesCS2B02G604700 , TraesCS2D02G597900
Populus -


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cDNA sequences
Sobic.006G273000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G275200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
2 Sobic.001G093600 - -
3 Sobic.010G245100 lectin-like receptor kinase 1, putative, expressed -
4 Sobic.003G284300 expressed protein -
5 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
6 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
7 Sobic.010G246600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed -
8 Sobic.010G052500 ZOS6-01 - C2H2 zinc finger protein, expressed -
9 Sobic.007G179750 - -
10 Sobic.001G310800 lectin-like receptor kinase, putative, expressed -
11 Sobic.007G191900 ACT domain containing protein, expressed -
12 Sobic.003G107300 light-induced protein 1-like, putative, expressed -
13 Sobic.003G088800 multi-copper oxidase type I family protein, putative, expressed -
14 Sobic.006G269400 expressed protein -
15 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.007G014600 transferase family protein, putative, expressed -
17 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
18 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
19 Sobic.001G321600 dehydration response related protein, putative, expressed -
20 Sobic.005G055900 expressed protein -


Gene co-expression network
sample Sobic006G273000 Sobic006G273000 Sobic001G275200 Sobic001G275200 Sobic006G273000--Sobic001G275200 Sobic001G093600 Sobic001G093600 Sobic006G273000--Sobic001G093600 Sobic010G245100 Sobic010G245100 Sobic006G273000--Sobic010G245100 Sobic003G284300 Sobic003G284300 Sobic006G273000--Sobic003G284300 Sobic001G005500 Sobic001G005500 Sobic006G273000--Sobic001G005500 Sobic009G213400 Sobic009G213400 Sobic006G273000--Sobic009G213400 Sobic010G246600 Sobic010G246600 Sobic006G273000--Sobic010G246600 Sobic010G052500 Sobic010G052500 Sobic006G273000--Sobic010G052500 Sobic007G179750 Sobic007G179750 Sobic006G273000--Sobic007G179750 Sobic001G275200--Sobic006G273000 Sobic003G088800 Sobic003G088800 Sobic001G275200--Sobic003G088800 Sobic001G275200--Sobic001G093600 Sobic001G310800 Sobic001G310800 Sobic001G275200--Sobic001G310800 Sobic001G275200--Sobic001G005500 Sobic005G203900 Sobic005G203900 Sobic001G275200--Sobic005G203900 Sobic001G019300 Sobic001G019300 Sobic001G275200--Sobic001G019300 Sobic001G435500 Sobic001G435500 Sobic001G275200--Sobic001G435500 Sobic005G055900 Sobic005G055900 Sobic001G275200--Sobic005G055900 Sobic003G107300 Sobic003G107300 Sobic001G093600--Sobic003G107300 Sobic001G093600--Sobic006G273000 Sobic001G093600--Sobic001G005500 Sobic001G093600--Sobic001G275200 Sobic003G255100 Sobic003G255100 Sobic001G093600--Sobic003G255100 Sobic001G093600--Sobic007G179750 Sobic001G093600--Sobic003G284300 Sobic007G191900 Sobic007G191900 Sobic001G093600--Sobic007G191900 Sobic001G321600 Sobic001G321600 Sobic001G093600--Sobic001G321600 Sobic010G245100--Sobic009G213400 Sobic010G245100--Sobic006G273000 Sobic003G222300 Sobic003G222300 Sobic010G245100--Sobic003G222300 Sobic010G245100--Sobic003G284300 Sobic010G245100--Sobic001G275200 Sobic010G245100--Sobic001G005500 Sobic010G245100--Sobic010G052500 Sobic010G245100--Sobic005G055900 Sobic010G245100--Sobic001G093600 Sobic009G038200 Sobic009G038200 Sobic003G284300--Sobic009G038200 Sobic003G284300--Sobic006G273000 Sobic003G284300--Sobic001G005500 Sobic003G284300--Sobic001G321600 Sobic003G284300--Sobic001G093600 Sobic003G284300--Sobic001G019300 Sobic006G197800 Sobic006G197800 Sobic003G284300--Sobic006G197800 Sobic005G063900 Sobic005G063900 Sobic003G284300--Sobic005G063900 Sobic007G014600 Sobic007G014600 Sobic003G284300--Sobic007G014600 Sobic001G005500--Sobic001G321600 Sobic002G195700 Sobic002G195700 Sobic001G005500--Sobic002G195700 Sobic001G005500--Sobic001G019300 Sobic001G005500--Sobic001G093600 Sobic002G366100 Sobic002G366100 Sobic001G005500--Sobic002G366100 Sobic008G073400 Sobic008G073400 Sobic001G005500--Sobic008G073400 Sobic006G269400 Sobic006G269400 Sobic001G005500--Sobic006G269400 Sobic001G005500--Sobic006G273000 Sobic001G005500--Sobic007G191900 Sobic009G213400--Sobic010G245100 Sobic001G377000 Sobic001G377000 Sobic009G213400--Sobic001G377000 Sobic004G096300 Sobic004G096300 Sobic009G213400--Sobic004G096300 Sobic009G213400--Sobic006G273000 Sobic009G213400--Sobic003G222300 Sobic001G191200 Sobic001G191200 Sobic009G213400--Sobic001G191200 Sobic006G053700 Sobic006G053700 Sobic009G213400--Sobic006G053700 Sobic009G213400--Sobic001G093600 Sobic009G213400--Sobic010G052500 Sobic010G246600--Sobic006G273000 Sobic010G246600--Sobic001G093600 Sobic001G452700 Sobic001G452700 Sobic010G246600--Sobic001G452700 Sobic010G246600--Sobic001G275200 Sobic010G246600--Sobic010G052500 Sobic001G217700 Sobic001G217700 Sobic010G246600--Sobic001G217700 Sobic010G246600--Sobic007G179750 Sobic010G246600--Sobic003G284300 Sobic010G246600--Sobic004G096300 Sobic010G052500--Sobic003G222300 Sobic003G114100 Sobic003G114100 Sobic010G052500--Sobic003G114100 Sobic010G052500--Sobic006G273000 Sobic010G052500--Sobic009G213400 Sobic010G052500--Sobic001G005500 Sobic010G052500--Sobic010G246600 Sobic010G052500--Sobic001G275200 Sobic010G052500--Sobic007G191900 Sobic010G052500--Sobic010G245100 Sobic007G179750--Sobic001G093600 Sobic007G179750--Sobic006G273000 Sobic007G179750--Sobic003G107300 Sobic007G179750--Sobic007G014600 Sobic007G179750--Sobic001G005500 Sobic008G101500 Sobic008G101500 Sobic007G179750--Sobic008G101500 Sobic007G179750--Sobic010G246600 Sobic007G179750--Sobic007G191900 Sobic008G152200 Sobic008G152200 Sobic007G179750--Sobic008G152200
Octagon: transcription factors


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