Gene annotation
Transcriptome id Sobic.005G055900.1
Synonym Sb05g004560
Functional annotation expressed protein
UniProt A0A1B6PQC8
Pfam PF00560 PF07714 PF08263 PF12799 PF13855
Panther DB PTHR27000 PTHR27000:SF116
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G47570 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os11g07260.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ89251 , KQJ89252 , KQJ89253 , PNT64100 , KQJ89244 , KQJ89243 , PNT64091 , PNT64102
Barley HORVU4Hr1G019490.13 , HORVU4Hr1G019490.12 , HORVU4Hr1G019490.11 , HORVU4Hr1G019490.10 , HORVU4Hr1G019490.17 , HORVU4Hr1G019490.16 , HORVU4Hr1G019490.15 , HORVU4Hr1G019490.14 , HORVU4Hr1G019490.19 , HORVU4Hr1G019490.18 , HORVU4Hr1G019490.3 , HORVU4Hr1G019490.2 , HORVU4Hr1G019490.1 , HORVU4Hr1G019490.7 , HORVU4Hr1G019490.6 , HORVU4Hr1G019490.5 , HORVU4Hr1G019490.4 , HORVU4Hr1G019490.9 , HORVU4Hr1G019490.8 , HORVU4Hr1G019490.31 , HORVU4Hr1G019490.30 , HORVU4Hr1G019490.33 , HORVU4Hr1G019490.32 , HORVU4Hr1G019490.28 , HORVU4Hr1G019490.29 , HORVU4Hr1G019490.22 , HORVU4Hr1G019490.23 , HORVU4Hr1G019490.20 , HORVU4Hr1G019490.21 , HORVU4Hr1G019490.26 , HORVU4Hr1G019490.27 , HORVU4Hr1G019490.24 , HORVU4Hr1G019490.25
Wheat TraesCSU02G173400 , TraesCSU02G173400 , TraesCSU02G173400 , TraesCS4D02G107000 , TraesCS2D02G496300 , TraesCS3B02G072700 , TraesCS3D02G060300 , TraesCS4B02G109600 , TraesCS4D02G106900 , TraesCS3A02G060200 , TraesCS3A02G060100 , TraesCS3A02G007200 , TraesCS2B02G524300 , TraesCS3A02G060000 , TraesCS6D02G000800 , TraesCS6D02G000800 , TraesCS4D02G003300 , TraesCS4D02G003300 , TraesCS4A02G310800 , TraesCS3D02G060500 , TraesCS5A02G474400 , TraesCSU02G167400 , TraesCSU02G167400 , TraesCSU02G167400 , TraesCSU02G167400 , TraesCSU02G084200 , TraesCS4A02G206000 , TraesCS3D02G003700 , TraesCS2A02G496000
Populus PNT18197


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G435500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
2 Sobic.003G088800 multi-copper oxidase type I family protein, putative, expressed -
3 Sobic.002G337001 - -
4 Sobic.003G163700 Glutaredoxin family protein (Os)(PubMedID : 27208977)@expressed protein K03676: grxC, GLRX, glutaredoxin 3
5 Sobic.001G275200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.004G144700 ABC transporter family protein, putative, expressed -
7 Sobic.010G128000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
8 Sobic.005G203900 OsGrx_C17 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
9 Sobic.006G135100 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
10 Sobic.008G002700 receptor protein kinase CRINKLY4 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
11 Sobic.010G245100 lectin-like receptor kinase 1, putative, expressed -
12 Sobic.005G099700 expressed protein -
13 Sobic.008G015100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
14 Sobic.008G101400 - -
15 Sobic.001G066600 mTERF domain containing protein, expressed -
16 Sobic.002G327800 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
17 Sobic.009G171300 PX domain containing protein, expressed -
18 Sobic.006G273000 AT hook motif domain containing protein, expressed -
19 Sobic.001G068301 - K16189: phytochrome-interacting factor 4
20 Sobic.010G194001 - -


Gene co-expression network
sample Sobic005G055900 Sobic005G055900 Sobic001G435500 Sobic001G435500 Sobic005G055900--Sobic001G435500 Sobic003G088800 Sobic003G088800 Sobic005G055900--Sobic003G088800 Sobic002G337001 Sobic002G337001 Sobic005G055900--Sobic002G337001 Sobic003G163700 Sobic003G163700 Sobic005G055900--Sobic003G163700 Sobic001G275200 Sobic001G275200 Sobic005G055900--Sobic001G275200 Sobic004G144700 Sobic004G144700 Sobic005G055900--Sobic004G144700 Sobic010G128000 Sobic010G128000 Sobic005G055900--Sobic010G128000 Sobic005G203900 Sobic005G203900 Sobic005G055900--Sobic005G203900 Sobic006G135100 Sobic006G135100 Sobic005G055900--Sobic006G135100 Sobic001G070500 Sobic001G070500 Sobic001G435500--Sobic001G070500 Sobic010G189300 Sobic010G189300 Sobic001G435500--Sobic010G189300 Sobic005G099700 Sobic005G099700 Sobic001G435500--Sobic005G099700 Sobic007G136900 Sobic007G136900 Sobic001G435500--Sobic007G136900 Sobic002G033900 Sobic002G033900 Sobic001G435500--Sobic002G033900 Sobic004G056900 Sobic004G056900 Sobic001G435500--Sobic004G056900 Sobic009G229700 Sobic009G229700 Sobic001G435500--Sobic009G229700 Sobic001G066600 Sobic001G066600 Sobic001G435500--Sobic001G066600 Sobic006G073500 Sobic006G073500 Sobic001G435500--Sobic006G073500 Sobic003G088800--Sobic001G275200 Sobic003G088800--Sobic001G435500 Sobic003G088800--Sobic002G337001 Sobic008G015100 Sobic008G015100 Sobic003G088800--Sobic008G015100 Sobic001G019300 Sobic001G019300 Sobic003G088800--Sobic001G019300 Sobic003G088800--Sobic005G055900 Sobic003G088800--Sobic005G203900 Sobic003G369000 Sobic003G369000 Sobic003G088800--Sobic003G369000 Sobic003G088800--Sobic005G099700 Sobic002G337001--Sobic001G435500 Sobic002G337001--Sobic003G088800 Sobic009G202600 Sobic009G202600 Sobic002G337001--Sobic009G202600 Sobic002G337001--Sobic005G055900 Sobic002G337001--Sobic001G019300 Sobic005G063900 Sobic005G063900 Sobic002G337001--Sobic005G063900 Sobic009G202400 Sobic009G202400 Sobic002G337001--Sobic009G202400 Sobic002G337001--Sobic010G128000 Sobic001G260850 Sobic001G260850 Sobic002G337001--Sobic001G260850 Sobic003G163700--Sobic005G099700 Sobic003G163700--Sobic001G435500 Sobic005G111200 Sobic005G111200 Sobic003G163700--Sobic005G111200 Sobic008G117300 Sobic008G117300 Sobic003G163700--Sobic008G117300 Sobic003G163700--Sobic008G015100 Sobic009G171300 Sobic009G171300 Sobic003G163700--Sobic009G171300 Sobic004G272600 Sobic004G272600 Sobic003G163700--Sobic004G272600 Sobic003G163700--Sobic001G066600 Sobic005G204000 Sobic005G204000 Sobic003G163700--Sobic005G204000 Sobic006G273000 Sobic006G273000 Sobic001G275200--Sobic006G273000 Sobic001G275200--Sobic003G088800 Sobic001G093600 Sobic001G093600 Sobic001G275200--Sobic001G093600 Sobic001G310800 Sobic001G310800 Sobic001G275200--Sobic001G310800 Sobic001G005500 Sobic001G005500 Sobic001G275200--Sobic001G005500 Sobic001G275200--Sobic005G203900 Sobic001G275200--Sobic001G019300 Sobic001G275200--Sobic001G435500 Sobic001G275200--Sobic005G055900 Sobic004G144700--Sobic008G015100 Sobic004G144700--Sobic005G055900 Sobic008G060150 Sobic008G060150 Sobic004G144700--Sobic008G060150 Sobic004G144700--Sobic003G163700 Sobic004G144700--Sobic001G066600 Sobic004G144700--Sobic009G171300 Sobic004G144700--Sobic001G435500 Sobic004G144700--Sobic010G189300 Sobic004G144700--Sobic003G088800 Sobic010G128000--Sobic001G435500 Sobic010G128000--Sobic001G066600 Sobic010G128000--Sobic008G117300 Sobic010G128000--Sobic009G229700 Sobic007G090475 Sobic007G090475 Sobic010G128000--Sobic007G090475 Sobic010G128000--Sobic001G070500 Sobic010G128000--Sobic010G189300 Sobic010G128000--Sobic001G260850 Sobic010G128000--Sobic002G033900 Sobic005G203900--Sobic005G204000 Sobic005G203900--Sobic001G260850 Sobic005G203900--Sobic008G117300 Sobic005G203900--Sobic003G088800 Sobic005G203900--Sobic001G275200 Sobic005G203900--Sobic003G163700 Sobic005G203900--Sobic001G435500 Sobic005G203900--Sobic001G019300 Sobic005G203900--Sobic005G055900 Sobic010G214000 Sobic010G214000 Sobic006G135100--Sobic010G214000 Sobic005G015200 Sobic005G015200 Sobic006G135100--Sobic005G015200 Sobic006G135100--Sobic008G015100 Sobic005G097800 Sobic005G097800 Sobic006G135100--Sobic005G097800 Sobic010G225600 Sobic010G225600 Sobic006G135100--Sobic010G225600 Sobic010G096300 Sobic010G096300 Sobic006G135100--Sobic010G096300 Sobic006G135100--Sobic003G088800 Sobic006G135100--Sobic009G202400 Sobic006G135100--Sobic005G055900
Octagon: transcription factors


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