Gene annotation
Transcriptome id Sobic.010G128000.1
Synonym Sb10g011210
Functional annotation aspartic proteinase nepenthesin-2 precursor, putative, expressed
UniProt C5Z965
Pfam PF14541
Panther DB PTHR13683 PTHR13683:SF290
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G10770 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os02g48870.1 : aspartic proteinase nepenthesin-2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a032596 , Zm00025a050570
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G435500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
2 Sobic.001G066600 mTERF domain containing protein, expressed -
3 Sobic.008G117300 Glutaredoxin family protein (At)(PubMedID : 27208977)@OsGrx_C12 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
4 Sobic.009G229700 Photosystem I reaction center subunit VI(PubMedID : 26186930)@expressed protein K02695: photosystem I subunit VI
5 Sobic.007G090475 - -
6 Sobic.001G070500 Photosystem I reaction center subunit III(PubMedID : 26186930)@photosystem I subunit F(PubMedID : 26465154)@photosystem I subunit F(PubMedID : 26465154)@Photosystem I subunit F(PubMedID : 29017446)@photosystem I reaction center subunit III, chloroplast precursor, putative, expressed K02694: photosystem I subunit III
7 Sobic.010G189300 Chorophyll a/b binding protein 8(PubMedID : 26186930)@photosystem I light harvesting complex gene 3(PubMedID : 26465154)@chlorophyll A-B binding protein, putative, expressed K08909: light-harvesting complex I chlorophyll a/b binding protein 3
8 Sobic.001G260850 - -
9 Sobic.002G033900 Photosystem I reaction center subunit psaK(PubMedID : 26186930)@photosystem I reaction center subunit, chloroplast precursor, putative, expressed K02698: photosystem I subunit X
10 Sobic.003G163700 Glutaredoxin family protein (Os)(PubMedID : 27208977)@expressed protein K03676: grxC, GLRX, glutaredoxin 3
11 Sobic.006G073500 hypothetical protein SORBIDRAFT_06g016090(PubMedID : 26186930)@Photosystem I subunit O PSI-O (At)(PubMedID : 27208977)@membrane protein, putative, expressed K14332: photosystem I subunit PsaO
12 Sobic.002G082950 - -
13 Sobic.005G099700 expressed protein -
14 Sobic.005G204000 OsGrx_C17 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
15 Sobic.002G337001 - -
16 Sobic.003G369000 - -
17 Sobic.005G152600 - -
18 Sobic.002G327800 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
19 Sobic.005G055900 expressed protein -
20 Sobic.009G165200 plant-specific domain TIGR01589 family protein, expressed -


Gene co-expression network
sample Sobic010G128000 Sobic010G128000 Sobic001G435500 Sobic001G435500 Sobic010G128000--Sobic001G435500 Sobic001G066600 Sobic001G066600 Sobic010G128000--Sobic001G066600 Sobic008G117300 Sobic008G117300 Sobic010G128000--Sobic008G117300 Sobic009G229700 Sobic009G229700 Sobic010G128000--Sobic009G229700 Sobic007G090475 Sobic007G090475 Sobic010G128000--Sobic007G090475 Sobic001G070500 Sobic001G070500 Sobic010G128000--Sobic001G070500 Sobic010G189300 Sobic010G189300 Sobic010G128000--Sobic010G189300 Sobic001G260850 Sobic001G260850 Sobic010G128000--Sobic001G260850 Sobic002G033900 Sobic002G033900 Sobic010G128000--Sobic002G033900 Sobic001G435500--Sobic001G070500 Sobic001G435500--Sobic010G189300 Sobic005G099700 Sobic005G099700 Sobic001G435500--Sobic005G099700 Sobic007G136900 Sobic007G136900 Sobic001G435500--Sobic007G136900 Sobic001G435500--Sobic002G033900 Sobic004G056900 Sobic004G056900 Sobic001G435500--Sobic004G056900 Sobic001G435500--Sobic009G229700 Sobic001G435500--Sobic001G066600 Sobic006G073500 Sobic006G073500 Sobic001G435500--Sobic006G073500 Sobic001G066600--Sobic009G229700 Sobic009G165200 Sobic009G165200 Sobic001G066600--Sobic009G165200 Sobic001G066600--Sobic010G189300 Sobic001G066600--Sobic002G033900 Sobic001G066600--Sobic008G117300 Sobic005G152600 Sobic005G152600 Sobic001G066600--Sobic005G152600 Sobic001G066600--Sobic001G070500 Sobic001G066600--Sobic006G073500 Sobic002G352100 Sobic002G352100 Sobic001G066600--Sobic002G352100 Sobic005G204000 Sobic005G204000 Sobic008G117300--Sobic005G204000 Sobic004G071750 Sobic004G071750 Sobic008G117300--Sobic004G071750 Sobic008G117300--Sobic001G066600 Sobic005G203900 Sobic005G203900 Sobic008G117300--Sobic005G203900 Sobic008G117300--Sobic001G260850 Sobic007G221400 Sobic007G221400 Sobic008G117300--Sobic007G221400 Sobic008G117300--Sobic009G165200 Sobic002G048501 Sobic002G048501 Sobic008G117300--Sobic002G048501 Sobic003G163700 Sobic003G163700 Sobic008G117300--Sobic003G163700 Sobic009G229700--Sobic006G073500 Sobic009G229700--Sobic002G033900 Sobic005G087000 Sobic005G087000 Sobic009G229700--Sobic005G087000 Sobic001G046900 Sobic001G046900 Sobic009G229700--Sobic001G046900 Sobic009G229700--Sobic001G070500 Sobic009G229700--Sobic010G189300 Sobic009G229700--Sobic004G056900 Sobic009G229700--Sobic005G152600 Sobic009G229700--Sobic002G352100 Sobic002G132900 Sobic002G132900 Sobic007G090475--Sobic002G132900 Sobic007G090475--Sobic010G128000 Sobic007G090475--Sobic001G435500 Sobic007G090475--Sobic003G163700 Sobic007G090475--Sobic001G066600 Sobic007G090475--Sobic001G260850 Sobic002G082950 Sobic002G082950 Sobic007G090475--Sobic002G082950 Sobic007G090475--Sobic009G229700 Sobic008G002700 Sobic008G002700 Sobic007G090475--Sobic008G002700 Sobic001G070500--Sobic002G033900 Sobic001G070500--Sobic006G073500 Sobic001G070500--Sobic004G056900 Sobic001G070500--Sobic010G189300 Sobic001G070500--Sobic009G229700 Sobic002G242000 Sobic002G242000 Sobic001G070500--Sobic002G242000 Sobic001G070500--Sobic001G046900 Sobic001G070500--Sobic007G136900 Sobic003G052500 Sobic003G052500 Sobic001G070500--Sobic003G052500 Sobic010G189300--Sobic001G070500 Sobic010G189300--Sobic007G136900 Sobic010G189300--Sobic001G046900 Sobic010G189300--Sobic006G073500 Sobic010G189300--Sobic002G352100 Sobic010G189300--Sobic002G033900 Sobic010G189300--Sobic009G229700 Sobic004G235200 Sobic004G235200 Sobic010G189300--Sobic004G235200 Sobic010G189300--Sobic005G087000 Sobic001G260850--Sobic005G204000 Sobic001G260850--Sobic005G203900 Sobic001G260850--Sobic008G117300 Sobic001G260850--Sobic001G435500 Sobic001G260850--Sobic010G128000 Sobic002G337001 Sobic002G337001 Sobic001G260850--Sobic002G337001 Sobic003G369000 Sobic003G369000 Sobic001G260850--Sobic003G369000 Sobic008G036350 Sobic008G036350 Sobic001G260850--Sobic008G036350 Sobic001G260850--Sobic001G066600 Sobic002G033900--Sobic006G073500 Sobic002G033900--Sobic009G229700 Sobic002G033900--Sobic001G070500 Sobic002G033900--Sobic001G046900 Sobic002G033900--Sobic005G087000 Sobic002G033900--Sobic004G056900 Sobic002G033900--Sobic010G189300 Sobic010G241000 Sobic010G241000 Sobic002G033900--Sobic010G241000 Sobic002G033900--Sobic003G052500
Octagon: transcription factors


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