Gene annotation
Transcriptome id Sobic.002G327800.1
Synonym CRK10, RLK4, Sb02g035450
Functional annotation TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt C5XAS1
Pfam PF01657 PF00069
Panther DB PTHR27002 PTHR27002:SF16
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G05200 : cysteine-rich RLK (RECEPTOR-like protein kinase) 25
RAP-DB (Rice) LOC_Os07g35310.1 : TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a014848 , Zm00025a014849 , Zm00025a048294 , Zm00025a048295 , Zm00025a048290 , Zm00025a017146
Brachypodium KQK15904 , KQK15903 , PNT74977
Barley HORVU2Hr1G044510.2 , HORVU2Hr1G044510.3 , HORVU2Hr1G044510.6 , HORVU2Hr1G044510.4 , HORVU2Hr1G044510.5 , HORVU2Hr1G044270.7 , HORVU2Hr1G044270.6 , HORVU2Hr1G044270.5 , HORVU2Hr1G044270.4 , HORVU2Hr1G044270.3 , HORVU2Hr1G044270.2 , HORVU2Hr1G044270.9 , HORVU2Hr1G044270.8 , HORVU2Hr1G044510.11 , HORVU2Hr1G044510.15 , HORVU2Hr1G044510.16 , HORVU2Hr1G044510.17 , HORVU3Hr1G077170.6 , HORVU3Hr1G077170.5 , HORVU3Hr1G077170.4 , HORVU3Hr1G077170.3 , HORVU3Hr1G077170.2 , HORVU3Hr1G077170.9 , HORVU2Hr1G125250.3 , HORVU2Hr1G125250.2 , HORVU2Hr1G125250.1 , HORVU2Hr1G125250.7 , HORVU2Hr1G125250.6 , HORVU2Hr1G125250.5 , HORVU2Hr1G125250.4 , HORVU2Hr1G125250.9 , HORVU2Hr1G125250.8 , HORVU3Hr1G002820.8 , HORVU3Hr1G002820.1 , HORVU3Hr1G002820.3 , HORVU3Hr1G002820.2 , HORVU3Hr1G002820.5 , HORVU3Hr1G002820.4 , HORVU3Hr1G002820.7 , HORVU3Hr1G002820.6 , HORVU2Hr1G125250.13 , HORVU2Hr1G125250.11 , HORVU2Hr1G125250.15 , HORVU2Hr1G044510.21 , HORVU2Hr1G044510.23 , HORVU2Hr1G044510.25 , HORVU2Hr1G044510.24 , HORVU2Hr1G044510.26 , HORVU2Hr1G044270.12 , HORVU2Hr1G044270.11 , HORVU2Hr1G044270.10 , HORVU3Hr1G077170.11 , HORVU3Hr1G077170.10 , HORVU2Hr1G125250.12 , HORVU2Hr1G125250.10 , HORVU2Hr1G125250.14
Wheat TraesCS1B02G454100 , TraesCS1B02G454600 , TraesCS2A02G215900 , TraesCS2B02G241400 , TraesCS2B02G241400 , TraesCS2A02G216300 , TraesCS2A02G216300 , TraesCS2D02G221500 , TraesCS2D02G221500 , TraesCS2D02G221500 , TraesCS3A02G323500 , TraesCS3A02G323500 , TraesCS3A02G323500 , TraesCS3D02G316900 , TraesCS2B02G240900 , TraesCS2B02G240900 , TraesCS3B02G352700 , TraesCS3B02G352700 , TraesCS3B02G352700 , TraesCS3D02G317000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G327700 TKL_IRAK_DUF26-lc.15 - DUF26 kinases have homology to DUF26 containing loci, expressed -
2 Sobic.004G258300 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
3 Sobic.002G327900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
4 Sobic.010G128000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
5 Sobic.008G182900 thaumatin, putative, expressed -
6 Sobic.005G055900 expressed protein -
7 Sobic.004G144700 ABC transporter family protein, putative, expressed -
8 Sobic.008G146700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
9 Sobic.005G084300 glycosyl hydrolase, putative, expressed -
10 Sobic.001G435500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
11 Sobic.001G184100 Osmotic stress potassium transporter(PubMedID : 28620409)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
12 Sobic.003G088800 multi-copper oxidase type I family protein, putative, expressed -
13 Sobic.003G163700 Glutaredoxin family protein (Os)(PubMedID : 27208977)@expressed protein K03676: grxC, GLRX, glutaredoxin 3
14 Sobic.008G002700 receptor protein kinase CRINKLY4 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
15 Sobic.001G275200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.005G099700 expressed protein -
17 Sobic.010G194001 - -
18 Sobic.004G272600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
19 Sobic.005G217700 carboxyl-terminal peptidase, putative, expressed -
20 Sobic.008G015100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family


Gene co-expression network
sample Sobic002G327800 Sobic002G327800 Sobic002G327700 Sobic002G327700 Sobic002G327800--Sobic002G327700 Sobic004G258300 Sobic004G258300 Sobic002G327800--Sobic004G258300 Sobic002G327900 Sobic002G327900 Sobic002G327800--Sobic002G327900 Sobic010G128000 Sobic010G128000 Sobic002G327800--Sobic010G128000 Sobic008G182900 Sobic008G182900 Sobic002G327800--Sobic008G182900 Sobic005G055900 Sobic005G055900 Sobic002G327800--Sobic005G055900 Sobic004G144700 Sobic004G144700 Sobic002G327800--Sobic004G144700 Sobic008G146700 Sobic008G146700 Sobic002G327800--Sobic008G146700 Sobic005G084300 Sobic005G084300 Sobic002G327800--Sobic005G084300 Sobic002G327700--Sobic004G258300 Sobic002G327700--Sobic002G327800 Sobic002G327700--Sobic002G327900 Sobic002G327700--Sobic008G146700 Sobic007G058800 Sobic007G058800 Sobic002G327700--Sobic007G058800 Sobic007G059100 Sobic007G059100 Sobic002G327700--Sobic007G059100 Sobic002G195200 Sobic002G195200 Sobic002G327700--Sobic002G195200 Sobic001G184100 Sobic001G184100 Sobic002G327700--Sobic001G184100 Sobic002G327700--Sobic008G182900 Sobic004G258300--Sobic002G327700 Sobic004G258300--Sobic002G327900 Sobic004G258300--Sobic002G327800 Sobic004G258300--Sobic008G146700 Sobic004G258300--Sobic008G182900 Sobic004G258300--Sobic010G128000 Sobic004G258300--Sobic002G195200 Sobic004G258300--Sobic007G058800 Sobic004G258300--Sobic005G084300 Sobic002G327900--Sobic004G258300 Sobic002G327900--Sobic002G327700 Sobic002G327900--Sobic002G327800 Sobic002G327900--Sobic010G128000 Sobic002G327900--Sobic008G146700 Sobic007G070400 Sobic007G070400 Sobic002G327900--Sobic007G070400 Sobic002G327900--Sobic005G084300 Sobic002G327900--Sobic008G182900 Sobic002G327900--Sobic001G184100 Sobic001G435500 Sobic001G435500 Sobic010G128000--Sobic001G435500 Sobic001G066600 Sobic001G066600 Sobic010G128000--Sobic001G066600 Sobic008G117300 Sobic008G117300 Sobic010G128000--Sobic008G117300 Sobic009G229700 Sobic009G229700 Sobic010G128000--Sobic009G229700 Sobic007G090475 Sobic007G090475 Sobic010G128000--Sobic007G090475 Sobic001G070500 Sobic001G070500 Sobic010G128000--Sobic001G070500 Sobic010G189300 Sobic010G189300 Sobic010G128000--Sobic010G189300 Sobic001G260850 Sobic001G260850 Sobic010G128000--Sobic001G260850 Sobic002G033900 Sobic002G033900 Sobic010G128000--Sobic002G033900 Sobic008G182900--Sobic008G146700 Sobic008G182900--Sobic002G327800 Sobic008G182900--Sobic004G258300 Sobic008G182900--Sobic002G327700 Sobic008G182900--Sobic002G327900 Sobic005G171100 Sobic005G171100 Sobic008G182900--Sobic005G171100 Sobic008G182900--Sobic005G084300 Sobic002G209100 Sobic002G209100 Sobic008G182900--Sobic002G209100 Sobic005G063900 Sobic005G063900 Sobic008G182900--Sobic005G063900 Sobic005G055900--Sobic001G435500 Sobic003G088800 Sobic003G088800 Sobic005G055900--Sobic003G088800 Sobic002G337001 Sobic002G337001 Sobic005G055900--Sobic002G337001 Sobic003G163700 Sobic003G163700 Sobic005G055900--Sobic003G163700 Sobic001G275200 Sobic001G275200 Sobic005G055900--Sobic001G275200 Sobic005G055900--Sobic004G144700 Sobic005G055900--Sobic010G128000 Sobic005G203900 Sobic005G203900 Sobic005G055900--Sobic005G203900 Sobic006G135100 Sobic006G135100 Sobic005G055900--Sobic006G135100 Sobic008G015100 Sobic008G015100 Sobic004G144700--Sobic008G015100 Sobic004G144700--Sobic005G055900 Sobic008G060150 Sobic008G060150 Sobic004G144700--Sobic008G060150 Sobic004G144700--Sobic003G163700 Sobic004G144700--Sobic001G066600 Sobic009G171300 Sobic009G171300 Sobic004G144700--Sobic009G171300 Sobic004G144700--Sobic001G435500 Sobic004G144700--Sobic010G189300 Sobic004G144700--Sobic003G088800 Sobic008G146700--Sobic005G084300 Sobic008G146700--Sobic004G258300 Sobic008G146700--Sobic005G171100 Sobic008G146700--Sobic002G327900 Sobic008G146700--Sobic008G182900 Sobic010G240400 Sobic010G240400 Sobic008G146700--Sobic010G240400 Sobic008G146700--Sobic002G327700 Sobic008G146700--Sobic002G327800 Sobic009G073500 Sobic009G073500 Sobic008G146700--Sobic009G073500 Sobic005G084300--Sobic008G146700 Sobic005G084300--Sobic009G073500 Sobic005G084300--Sobic010G240400 Sobic005G084300--Sobic002G327900 Sobic005G169200 Sobic005G169200 Sobic005G084300--Sobic005G169200 Sobic005G084300--Sobic002G327800 Sobic005G084300--Sobic004G258300 Sobic005G084300--Sobic002G327700 Sobic005G084300--Sobic008G182900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.