Gene annotation
Transcriptome id Sobic.008G002700.1
Synonym Sb08g000420, ATCRR3, CCR3
Functional annotation receptor protein kinase CRINKLY4 precursor, putative, expressed
UniProt C5YQ08
Pfam PF07714
Panther DB PTHR27003 PTHR27003:SF56
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04730; interleukin-1 receptor-associated kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G55950 : CRINKLY4 related 3
RAP-DB (Rice) LOC_Os08g28710.1 : receptor protein kinase CRINKLY4 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a028921
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G002700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G024500 uncharacterized Cys-rich domain containing protein, putative, expressed -
2 Sobic.005G055900 expressed protein -
3 Sobic.005G203900 OsGrx_C17 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
4 Sobic.007G090475 - -
5 Sobic.010G128000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
6 Sobic.002G337001 - -
7 Sobic.003G088800 multi-copper oxidase type I family protein, putative, expressed -
8 Sobic.001G435500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
9 Sobic.005G063900 expressed protein -
10 Sobic.003G284300 expressed protein -
11 Sobic.010G179800 OsFBK16 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.007G220700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SAM dependent carboxyl methyltransferase, putative, expressed -
13 Sobic.003G163700 Glutaredoxin family protein (Os)(PubMedID : 27208977)@expressed protein K03676: grxC, GLRX, glutaredoxin 3
14 Sobic.001G275200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
15 Sobic.001G520100 MLO domain containing protein, putative, expressed K08472: mlo protein
16 Sobic.002G257100 regulatory protein, putative, expressed -
17 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
18 Sobic.009G038200 expressed protein -
19 Sobic.009G202600 glycerol-3-phosphate acyltransferase 1, putative, expressed K13508: glycerol-3-phosphate acyltransferase
20 Sobic.002G327800 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -


Gene co-expression network
sample Sobic008G002700 Sobic008G002700 Sobic001G024500 Sobic001G024500 Sobic008G002700--Sobic001G024500 Sobic005G055900 Sobic005G055900 Sobic008G002700--Sobic005G055900 Sobic005G203900 Sobic005G203900 Sobic008G002700--Sobic005G203900 Sobic007G090475 Sobic007G090475 Sobic008G002700--Sobic007G090475 Sobic010G128000 Sobic010G128000 Sobic008G002700--Sobic010G128000 Sobic002G337001 Sobic002G337001 Sobic008G002700--Sobic002G337001 Sobic003G088800 Sobic003G088800 Sobic008G002700--Sobic003G088800 Sobic001G435500 Sobic001G435500 Sobic008G002700--Sobic001G435500 Sobic005G063900 Sobic005G063900 Sobic008G002700--Sobic005G063900 Sobic001G093900 Sobic001G093900 Sobic001G024500--Sobic001G093900 Sobic001G024500--Sobic008G002700 Sobic007G220700 Sobic007G220700 Sobic001G024500--Sobic007G220700 Sobic002G376000 Sobic002G376000 Sobic001G024500--Sobic002G376000 Sobic010G179800 Sobic010G179800 Sobic001G024500--Sobic010G179800 Sobic003G075000 Sobic003G075000 Sobic001G024500--Sobic003G075000 Sobic001G075000 Sobic001G075000 Sobic001G024500--Sobic001G075000 Sobic005G161100 Sobic005G161100 Sobic001G024500--Sobic005G161100 Sobic001G182600 Sobic001G182600 Sobic001G024500--Sobic001G182600 Sobic005G055900--Sobic001G435500 Sobic005G055900--Sobic003G088800 Sobic005G055900--Sobic002G337001 Sobic003G163700 Sobic003G163700 Sobic005G055900--Sobic003G163700 Sobic001G275200 Sobic001G275200 Sobic005G055900--Sobic001G275200 Sobic004G144700 Sobic004G144700 Sobic005G055900--Sobic004G144700 Sobic005G055900--Sobic010G128000 Sobic005G055900--Sobic005G203900 Sobic006G135100 Sobic006G135100 Sobic005G055900--Sobic006G135100 Sobic005G204000 Sobic005G204000 Sobic005G203900--Sobic005G204000 Sobic001G260850 Sobic001G260850 Sobic005G203900--Sobic001G260850 Sobic008G117300 Sobic008G117300 Sobic005G203900--Sobic008G117300 Sobic005G203900--Sobic003G088800 Sobic005G203900--Sobic001G275200 Sobic005G203900--Sobic003G163700 Sobic005G203900--Sobic001G435500 Sobic001G019300 Sobic001G019300 Sobic005G203900--Sobic001G019300 Sobic005G203900--Sobic005G055900 Sobic002G132900 Sobic002G132900 Sobic007G090475--Sobic002G132900 Sobic007G090475--Sobic010G128000 Sobic007G090475--Sobic001G435500 Sobic007G090475--Sobic003G163700 Sobic001G066600 Sobic001G066600 Sobic007G090475--Sobic001G066600 Sobic007G090475--Sobic001G260850 Sobic002G082950 Sobic002G082950 Sobic007G090475--Sobic002G082950 Sobic009G229700 Sobic009G229700 Sobic007G090475--Sobic009G229700 Sobic007G090475--Sobic008G002700 Sobic010G128000--Sobic001G435500 Sobic010G128000--Sobic001G066600 Sobic010G128000--Sobic008G117300 Sobic010G128000--Sobic009G229700 Sobic010G128000--Sobic007G090475 Sobic001G070500 Sobic001G070500 Sobic010G128000--Sobic001G070500 Sobic010G189300 Sobic010G189300 Sobic010G128000--Sobic010G189300 Sobic010G128000--Sobic001G260850 Sobic002G033900 Sobic002G033900 Sobic010G128000--Sobic002G033900 Sobic002G337001--Sobic001G435500 Sobic002G337001--Sobic003G088800 Sobic009G202600 Sobic009G202600 Sobic002G337001--Sobic009G202600 Sobic002G337001--Sobic005G055900 Sobic002G337001--Sobic001G019300 Sobic002G337001--Sobic005G063900 Sobic009G202400 Sobic009G202400 Sobic002G337001--Sobic009G202400 Sobic002G337001--Sobic010G128000 Sobic002G337001--Sobic001G260850 Sobic003G088800--Sobic001G275200 Sobic003G088800--Sobic001G435500 Sobic003G088800--Sobic002G337001 Sobic008G015100 Sobic008G015100 Sobic003G088800--Sobic008G015100 Sobic003G088800--Sobic001G019300 Sobic003G088800--Sobic005G055900 Sobic003G088800--Sobic005G203900 Sobic003G369000 Sobic003G369000 Sobic003G088800--Sobic003G369000 Sobic005G099700 Sobic005G099700 Sobic003G088800--Sobic005G099700 Sobic001G435500--Sobic001G070500 Sobic001G435500--Sobic010G189300 Sobic001G435500--Sobic005G099700 Sobic007G136900 Sobic007G136900 Sobic001G435500--Sobic007G136900 Sobic001G435500--Sobic002G033900 Sobic004G056900 Sobic004G056900 Sobic001G435500--Sobic004G056900 Sobic001G435500--Sobic009G229700 Sobic001G435500--Sobic001G066600 Sobic006G073500 Sobic006G073500 Sobic001G435500--Sobic006G073500 Sobic005G063900--Sobic001G019300 Sobic002G265400 Sobic002G265400 Sobic005G063900--Sobic002G265400 Sobic001G520100 Sobic001G520100 Sobic005G063900--Sobic001G520100 Sobic005G190900 Sobic005G190900 Sobic005G063900--Sobic005G190900 Sobic009G038200 Sobic009G038200 Sobic005G063900--Sobic009G038200 Sobic002G041800 Sobic002G041800 Sobic005G063900--Sobic002G041800 Sobic005G063900--Sobic002G337001 Sobic002G257100 Sobic002G257100 Sobic005G063900--Sobic002G257100 Sobic001G321600 Sobic001G321600 Sobic005G063900--Sobic001G321600
Octagon: transcription factors


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