Gene annotation
Transcriptome id Sobic.009G202600.1
Synonym ATGPAT1, Sb09g026000, GPAT1
Functional annotation glycerol-3-phosphate acyltransferase 1, putative, expressed
UniProt C5Z1C4
Pfam PF01553
Panther DB PTHR15486 PTHR15486:SF19
NCBI CDD -
KEGG Orthology K13508; glycerol-3-phosphate acyltransferase
Gene Ontology GO:0016746; transferase activity, transferring acyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G06520 : glycerol-3-phosphate acyltransferase 1
RAP-DB (Rice) LOC_Os10g41070.1 : glycerol-3-phosphate acyltransferase 1, putative, expressed
MaizeGDB (Corn) Zm00025a008905
Brachypodium KQJ98500 , KQJ98439
Barley HORVU2Hr1G081970.3 , HORVU2Hr1G081970.2 , HORVU2Hr1G081970.1 , HORVU3Hr1G080190.3 , HORVU3Hr1G080190.1 , HORVU3Hr1G080190.2 , HORVU3Hr1G080190.4
Wheat TraesCS1B02G233800 , TraesCS6B02G051800 , TraesCS4B02G282100 , TraesCS1D02G222100 , TraesCS6B02G052300 , TraesCSU02G033700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G337001 - -
2 Sobic.005G063900 expressed protein -
3 Sobic.003G088800 multi-copper oxidase type I family protein, putative, expressed -
4 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
5 Sobic.001G520100 MLO domain containing protein, putative, expressed K08472: mlo protein
6 Sobic.001G435500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
7 Sobic.001G260850 - -
8 Sobic.002G395200 gibberellin receptor GID1L2, putative, expressed -
9 Sobic.002G265400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
10 Sobic.009G202400 expressed protein -
11 Sobic.005G203900 OsGrx_C17 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
12 Sobic.010G089200 expressed protein -
13 Sobic.010G128000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
14 Sobic.005G055900 expressed protein -
15 Sobic.010G179500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
16 Sobic.005G217700 carboxyl-terminal peptidase, putative, expressed -
17 Sobic.007G037800 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
18 Sobic.008G002700 receptor protein kinase CRINKLY4 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
19 Sobic.004G210601 - -
20 Sobic.003G369000 - -


Gene co-expression network
sample Sobic009G202600 Sobic009G202600 Sobic002G337001 Sobic002G337001 Sobic009G202600--Sobic002G337001 Sobic005G063900 Sobic005G063900 Sobic009G202600--Sobic005G063900 Sobic003G088800 Sobic003G088800 Sobic009G202600--Sobic003G088800 Sobic001G019300 Sobic001G019300 Sobic009G202600--Sobic001G019300 Sobic001G520100 Sobic001G520100 Sobic009G202600--Sobic001G520100 Sobic001G435500 Sobic001G435500 Sobic009G202600--Sobic001G435500 Sobic001G260850 Sobic001G260850 Sobic009G202600--Sobic001G260850 Sobic002G395200 Sobic002G395200 Sobic009G202600--Sobic002G395200 Sobic002G265400 Sobic002G265400 Sobic009G202600--Sobic002G265400 Sobic002G337001--Sobic001G435500 Sobic002G337001--Sobic003G088800 Sobic002G337001--Sobic009G202600 Sobic005G055900 Sobic005G055900 Sobic002G337001--Sobic005G055900 Sobic002G337001--Sobic001G019300 Sobic002G337001--Sobic005G063900 Sobic009G202400 Sobic009G202400 Sobic002G337001--Sobic009G202400 Sobic010G128000 Sobic010G128000 Sobic002G337001--Sobic010G128000 Sobic002G337001--Sobic001G260850 Sobic005G063900--Sobic001G019300 Sobic005G063900--Sobic002G265400 Sobic005G063900--Sobic001G520100 Sobic005G190900 Sobic005G190900 Sobic005G063900--Sobic005G190900 Sobic009G038200 Sobic009G038200 Sobic005G063900--Sobic009G038200 Sobic002G041800 Sobic002G041800 Sobic005G063900--Sobic002G041800 Sobic005G063900--Sobic002G337001 Sobic002G257100 Sobic002G257100 Sobic005G063900--Sobic002G257100 Sobic001G321600 Sobic001G321600 Sobic005G063900--Sobic001G321600 Sobic001G275200 Sobic001G275200 Sobic003G088800--Sobic001G275200 Sobic003G088800--Sobic001G435500 Sobic003G088800--Sobic002G337001 Sobic008G015100 Sobic008G015100 Sobic003G088800--Sobic008G015100 Sobic003G088800--Sobic001G019300 Sobic003G088800--Sobic005G055900 Sobic005G203900 Sobic005G203900 Sobic003G088800--Sobic005G203900 Sobic003G369000 Sobic003G369000 Sobic003G088800--Sobic003G369000 Sobic005G099700 Sobic005G099700 Sobic003G088800--Sobic005G099700 Sobic001G019300--Sobic002G265400 Sobic002G281000 Sobic002G281000 Sobic001G019300--Sobic002G281000 Sobic001G019300--Sobic005G063900 Sobic001G019300--Sobic001G321600 Sobic001G005500 Sobic001G005500 Sobic001G019300--Sobic001G005500 Sobic008G073400 Sobic008G073400 Sobic001G019300--Sobic008G073400 Sobic002G195700 Sobic002G195700 Sobic001G019300--Sobic002G195700 Sobic001G019300--Sobic005G190900 Sobic001G198700 Sobic001G198700 Sobic001G019300--Sobic001G198700 Sobic001G520100--Sobic001G321600 Sobic010G089200 Sobic010G089200 Sobic001G520100--Sobic010G089200 Sobic001G520100--Sobic005G063900 Sobic001G520100--Sobic001G019300 Sobic010G179500 Sobic010G179500 Sobic001G520100--Sobic010G179500 Sobic001G520100--Sobic002G257100 Sobic001G520100--Sobic001G198700 Sobic001G520100--Sobic008G073400 Sobic009G153200 Sobic009G153200 Sobic001G520100--Sobic009G153200 Sobic001G070500 Sobic001G070500 Sobic001G435500--Sobic001G070500 Sobic010G189300 Sobic010G189300 Sobic001G435500--Sobic010G189300 Sobic001G435500--Sobic005G099700 Sobic007G136900 Sobic007G136900 Sobic001G435500--Sobic007G136900 Sobic002G033900 Sobic002G033900 Sobic001G435500--Sobic002G033900 Sobic004G056900 Sobic004G056900 Sobic001G435500--Sobic004G056900 Sobic009G229700 Sobic009G229700 Sobic001G435500--Sobic009G229700 Sobic001G066600 Sobic001G066600 Sobic001G435500--Sobic001G066600 Sobic006G073500 Sobic006G073500 Sobic001G435500--Sobic006G073500 Sobic005G204000 Sobic005G204000 Sobic001G260850--Sobic005G204000 Sobic001G260850--Sobic005G203900 Sobic008G117300 Sobic008G117300 Sobic001G260850--Sobic008G117300 Sobic001G260850--Sobic001G435500 Sobic001G260850--Sobic010G128000 Sobic001G260850--Sobic002G337001 Sobic001G260850--Sobic003G369000 Sobic008G036350 Sobic008G036350 Sobic001G260850--Sobic008G036350 Sobic001G260850--Sobic001G066600 Sobic002G395200--Sobic003G088800 Sobic005G097800 Sobic005G097800 Sobic002G395200--Sobic005G097800 Sobic002G395200--Sobic001G019300 Sobic002G395200--Sobic009G202600 Sobic002G395200--Sobic002G281000 Sobic001G525900 Sobic001G525900 Sobic002G395200--Sobic001G525900 Sobic002G395200--Sobic002G337001 Sobic010G193000 Sobic010G193000 Sobic002G395200--Sobic010G193000 Sobic002G395200--Sobic008G015100 Sobic002G265400--Sobic001G019300 Sobic004G063200 Sobic004G063200 Sobic002G265400--Sobic004G063200 Sobic002G265400--Sobic005G063900 Sobic002G265400--Sobic002G281000 Sobic002G265400--Sobic001G198700 Sobic002G265400--Sobic005G190900 Sobic002G265400--Sobic009G202400 Sobic002G371900 Sobic002G371900 Sobic002G265400--Sobic002G371900 Sobic009G252100 Sobic009G252100 Sobic002G265400--Sobic009G252100
Octagon: transcription factors


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