Gene annotation
Transcriptome id Sobic.001G260850.1
Synonym -
Functional annotation -
UniProt A0A1Z5S7S2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G204000 OsGrx_C17 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
2 Sobic.005G203900 OsGrx_C17 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
3 Sobic.008G117300 Glutaredoxin family protein (At)(PubMedID : 27208977)@OsGrx_C12 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
4 Sobic.001G435500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
5 Sobic.010G128000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
6 Sobic.002G337001 - -
7 Sobic.003G369000 - -
8 Sobic.008G036350 - -
9 Sobic.001G066600 mTERF domain containing protein, expressed -
10 Sobic.003G088800 multi-copper oxidase type I family protein, putative, expressed -
11 Sobic.003G163700 Glutaredoxin family protein (Os)(PubMedID : 27208977)@expressed protein K03676: grxC, GLRX, glutaredoxin 3
12 Sobic.004G201400 cadmium tolerance factor, putative, expressed -
13 Sobic.010G189300 Chorophyll a/b binding protein 8(PubMedID : 26186930)@photosystem I light harvesting complex gene 3(PubMedID : 26465154)@chlorophyll A-B binding protein, putative, expressed K08909: light-harvesting complex I chlorophyll a/b binding protein 3
14 Sobic.004G071750 - -
15 Sobic.007G090475 - -
16 Sobic.009G202600 glycerol-3-phosphate acyltransferase 1, putative, expressed K13508: glycerol-3-phosphate acyltransferase
17 Sobic.007G136900 Chorophyll a/b binding protein 4(PubMedID : 26186930)@Light harvesting complex PSI subunit A4 (At)(PubMedID : 27208977)@chlorophyll A-B binding protein, putative, expressed K08910: light-harvesting complex I chlorophyll a/b binding protein 4
18 Sobic.007G221400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
19 Sobic.005G099700 expressed protein -
20 Sobic.001G070500 Photosystem I reaction center subunit III(PubMedID : 26186930)@photosystem I subunit F(PubMedID : 26465154)@photosystem I subunit F(PubMedID : 26465154)@Photosystem I subunit F(PubMedID : 29017446)@photosystem I reaction center subunit III, chloroplast precursor, putative, expressed K02694: photosystem I subunit III


Gene co-expression network
sample Sobic001G260850 Sobic001G260850 Sobic005G204000 Sobic005G204000 Sobic001G260850--Sobic005G204000 Sobic005G203900 Sobic005G203900 Sobic001G260850--Sobic005G203900 Sobic008G117300 Sobic008G117300 Sobic001G260850--Sobic008G117300 Sobic001G435500 Sobic001G435500 Sobic001G260850--Sobic001G435500 Sobic010G128000 Sobic010G128000 Sobic001G260850--Sobic010G128000 Sobic002G337001 Sobic002G337001 Sobic001G260850--Sobic002G337001 Sobic003G369000 Sobic003G369000 Sobic001G260850--Sobic003G369000 Sobic008G036350 Sobic008G036350 Sobic001G260850--Sobic008G036350 Sobic001G066600 Sobic001G066600 Sobic001G260850--Sobic001G066600 Sobic005G204000--Sobic008G117300 Sobic004G071750 Sobic004G071750 Sobic005G204000--Sobic004G071750 Sobic001G160700 Sobic001G160700 Sobic005G204000--Sobic001G160700 Sobic005G203900--Sobic005G204000 Sobic005G203900--Sobic001G260850 Sobic005G203900--Sobic008G117300 Sobic003G088800 Sobic003G088800 Sobic005G203900--Sobic003G088800 Sobic001G275200 Sobic001G275200 Sobic005G203900--Sobic001G275200 Sobic003G163700 Sobic003G163700 Sobic005G203900--Sobic003G163700 Sobic005G203900--Sobic001G435500 Sobic001G019300 Sobic001G019300 Sobic005G203900--Sobic001G019300 Sobic005G055900 Sobic005G055900 Sobic005G203900--Sobic005G055900 Sobic008G117300--Sobic005G204000 Sobic008G117300--Sobic004G071750 Sobic008G117300--Sobic001G066600 Sobic008G117300--Sobic005G203900 Sobic008G117300--Sobic001G260850 Sobic007G221400 Sobic007G221400 Sobic008G117300--Sobic007G221400 Sobic009G165200 Sobic009G165200 Sobic008G117300--Sobic009G165200 Sobic002G048501 Sobic002G048501 Sobic008G117300--Sobic002G048501 Sobic008G117300--Sobic003G163700 Sobic001G070500 Sobic001G070500 Sobic001G435500--Sobic001G070500 Sobic010G189300 Sobic010G189300 Sobic001G435500--Sobic010G189300 Sobic005G099700 Sobic005G099700 Sobic001G435500--Sobic005G099700 Sobic007G136900 Sobic007G136900 Sobic001G435500--Sobic007G136900 Sobic002G033900 Sobic002G033900 Sobic001G435500--Sobic002G033900 Sobic004G056900 Sobic004G056900 Sobic001G435500--Sobic004G056900 Sobic009G229700 Sobic009G229700 Sobic001G435500--Sobic009G229700 Sobic001G435500--Sobic001G066600 Sobic006G073500 Sobic006G073500 Sobic001G435500--Sobic006G073500 Sobic010G128000--Sobic001G435500 Sobic010G128000--Sobic001G066600 Sobic010G128000--Sobic008G117300 Sobic010G128000--Sobic009G229700 Sobic007G090475 Sobic007G090475 Sobic010G128000--Sobic007G090475 Sobic010G128000--Sobic001G070500 Sobic010G128000--Sobic010G189300 Sobic010G128000--Sobic001G260850 Sobic010G128000--Sobic002G033900 Sobic002G337001--Sobic001G435500 Sobic002G337001--Sobic003G088800 Sobic009G202600 Sobic009G202600 Sobic002G337001--Sobic009G202600 Sobic002G337001--Sobic005G055900 Sobic002G337001--Sobic001G019300 Sobic005G063900 Sobic005G063900 Sobic002G337001--Sobic005G063900 Sobic009G202400 Sobic009G202400 Sobic002G337001--Sobic009G202400 Sobic002G337001--Sobic010G128000 Sobic002G337001--Sobic001G260850 Sobic002G352100 Sobic002G352100 Sobic003G369000--Sobic002G352100 Sobic003G369000--Sobic010G189300 Sobic003G369000--Sobic007G136900 Sobic001G046900 Sobic001G046900 Sobic003G369000--Sobic001G046900 Sobic003G369000--Sobic009G165200 Sobic003G369000--Sobic009G229700 Sobic003G055300 Sobic003G055300 Sobic003G369000--Sobic003G055300 Sobic003G369000--Sobic001G066600 Sobic003G369000--Sobic001G070500 Sobic008G036300 Sobic008G036300 Sobic008G036350--Sobic008G036300 Sobic005G167500 Sobic005G167500 Sobic008G036350--Sobic005G167500 Sobic005G192600 Sobic005G192600 Sobic008G036350--Sobic005G192600 Sobic008G036350--Sobic001G435500 Sobic001G338700 Sobic001G338700 Sobic008G036350--Sobic001G338700 Sobic008G036350--Sobic004G056900 Sobic008G036350--Sobic001G070500 Sobic001G498300 Sobic001G498300 Sobic008G036350--Sobic001G498300 Sobic002G242000 Sobic002G242000 Sobic008G036350--Sobic002G242000 Sobic001G066600--Sobic009G229700 Sobic001G066600--Sobic009G165200 Sobic001G066600--Sobic010G189300 Sobic001G066600--Sobic002G033900 Sobic001G066600--Sobic008G117300 Sobic005G152600 Sobic005G152600 Sobic001G066600--Sobic005G152600 Sobic001G066600--Sobic001G070500 Sobic001G066600--Sobic006G073500 Sobic001G066600--Sobic002G352100
Octagon: transcription factors


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