Gene annotation
Transcriptome id Sobic.004G201400.1
Synonym Sb04g024770
Functional annotation cadmium tolerance factor, putative, expressed
UniProt A0A1Z5RNC7
Pfam PF13962
Panther DB PTHR24177 PTHR24177:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50140 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os06g19300.1 : cadmium tolerance factor, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT61281 , PNT61282 , KQJ83116
Barley HORVU6Hr1G086440.16 , HORVU6Hr1G086570.2 , HORVU6Hr1G086570.3 , HORVU6Hr1G086570.1 , HORVU6Hr1G086570.6 , HORVU6Hr1G086570.5 , HORVU6Hr1G086440.14 , HORVU6Hr1G086440.15 , HORVU6Hr1G086440.17 , HORVU6Hr1G086440.10 , HORVU6Hr1G086440.11 , HORVU6Hr1G086440.12 , HORVU6Hr1G086440.13 , HORVU7Hr1G044100.1 , HORVU7Hr1G044100.4 , HORVU7Hr1G044100.5 , HORVU7Hr1G044100.6 , HORVU7Hr1G044100.7 , HORVU7Hr1G044100.8 , HORVU7Hr1G044100.9 , HORVU6Hr1G086440.8 , HORVU6Hr1G086440.9 , HORVU6Hr1G086440.6 , HORVU6Hr1G086440.7 , HORVU6Hr1G086440.4 , HORVU6Hr1G086440.5 , HORVU6Hr1G086440.2 , HORVU6Hr1G086440.3 , HORVU6Hr1G086440.1 , HORVU7Hr1G044100.12 , HORVU7Hr1G044100.10 , HORVU7Hr1G044100.11 , HORVU7Hr1G044100.14
Wheat TraesCS6D02G346600 , TraesCS6A02G363500 , TraesCSU02G126100 , TraesCS7A02G217300 , TraesCS6A02G363300 , TraesCS6D02G346900 , TraesCS4A02G450100 , TraesCS6B02G397400 , TraesCS6B02G397300 , TraesCS6D02G346500 , TraesCS6D02G346500 , TraesCS6B02G003300 , TraesCS7A02G217400 , TraesCS7D02G219000 , TraesCS4A02G450100 , TraesCS6B02G397000 , TraesCS5A02G551500 , TraesCS7B02G124400 , TraesCS6B02G397900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G128000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
2 Sobic.001G260850 - -
3 Sobic.008G036350 - -
4 Sobic.001G435500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
5 Sobic.004G197800 expressed protein -
6 Sobic.003G385700 - -
7 Sobic.002G337001 - -
8 Sobic.004G210601 - -
9 Sobic.007G090475 - -
10 Sobic.005G167500 resistance protein, putative, expressed -
11 Sobic.001G070500 Photosystem I reaction center subunit III(PubMedID : 26186930)@photosystem I subunit F(PubMedID : 26465154)@photosystem I subunit F(PubMedID : 26465154)@Photosystem I subunit F(PubMedID : 29017446)@photosystem I reaction center subunit III, chloroplast precursor, putative, expressed K02694: photosystem I subunit III
12 Sobic.009G214800 - -
13 Sobic.009G229700 Photosystem I reaction center subunit VI(PubMedID : 26186930)@expressed protein K02695: photosystem I subunit VI
14 Sobic.005G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
15 Sobic.002G033900 Photosystem I reaction center subunit psaK(PubMedID : 26186930)@photosystem I reaction center subunit, chloroplast precursor, putative, expressed K02698: photosystem I subunit X
16 Sobic.010G115900 ureide permease, putative, expressed -
17 Sobic.004G056900 Chorophyll a/b binding protein 1B-21(PubMedID : 26186930)@Light harvesting complex-I subunit A4(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08907: light-harvesting complex I chlorophyll a/b binding protein 1
18 Sobic.010G156700 zinc finger, C3HC4 type domain containing protein, expressed K19038: E3 ubiquitin-protein ligase ATL41
19 Sobic.006G073500 hypothetical protein SORBIDRAFT_06g016090(PubMedID : 26186930)@Photosystem I subunit O PSI-O (At)(PubMedID : 27208977)@membrane protein, putative, expressed K14332: photosystem I subunit PsaO
20 Sobic.009G107020 - -


Gene co-expression network
sample Sobic004G201400 Sobic004G201400 Sobic010G128000 Sobic010G128000 Sobic004G201400--Sobic010G128000 Sobic001G260850 Sobic001G260850 Sobic004G201400--Sobic001G260850 Sobic008G036350 Sobic008G036350 Sobic004G201400--Sobic008G036350 Sobic001G435500 Sobic001G435500 Sobic004G201400--Sobic001G435500 Sobic004G197800 Sobic004G197800 Sobic004G201400--Sobic004G197800 Sobic003G385700 Sobic003G385700 Sobic004G201400--Sobic003G385700 Sobic002G337001 Sobic002G337001 Sobic004G201400--Sobic002G337001 Sobic004G210601 Sobic004G210601 Sobic004G201400--Sobic004G210601 Sobic007G090475 Sobic007G090475 Sobic004G201400--Sobic007G090475 Sobic010G128000--Sobic001G435500 Sobic001G066600 Sobic001G066600 Sobic010G128000--Sobic001G066600 Sobic008G117300 Sobic008G117300 Sobic010G128000--Sobic008G117300 Sobic009G229700 Sobic009G229700 Sobic010G128000--Sobic009G229700 Sobic010G128000--Sobic007G090475 Sobic001G070500 Sobic001G070500 Sobic010G128000--Sobic001G070500 Sobic010G189300 Sobic010G189300 Sobic010G128000--Sobic010G189300 Sobic010G128000--Sobic001G260850 Sobic002G033900 Sobic002G033900 Sobic010G128000--Sobic002G033900 Sobic005G204000 Sobic005G204000 Sobic001G260850--Sobic005G204000 Sobic005G203900 Sobic005G203900 Sobic001G260850--Sobic005G203900 Sobic001G260850--Sobic008G117300 Sobic001G260850--Sobic001G435500 Sobic001G260850--Sobic010G128000 Sobic001G260850--Sobic002G337001 Sobic003G369000 Sobic003G369000 Sobic001G260850--Sobic003G369000 Sobic001G260850--Sobic008G036350 Sobic001G260850--Sobic001G066600 Sobic008G036300 Sobic008G036300 Sobic008G036350--Sobic008G036300 Sobic005G167500 Sobic005G167500 Sobic008G036350--Sobic005G167500 Sobic005G192600 Sobic005G192600 Sobic008G036350--Sobic005G192600 Sobic008G036350--Sobic001G435500 Sobic001G338700 Sobic001G338700 Sobic008G036350--Sobic001G338700 Sobic004G056900 Sobic004G056900 Sobic008G036350--Sobic004G056900 Sobic008G036350--Sobic001G070500 Sobic001G498300 Sobic001G498300 Sobic008G036350--Sobic001G498300 Sobic002G242000 Sobic002G242000 Sobic008G036350--Sobic002G242000 Sobic001G435500--Sobic001G070500 Sobic001G435500--Sobic010G189300 Sobic005G099700 Sobic005G099700 Sobic001G435500--Sobic005G099700 Sobic007G136900 Sobic007G136900 Sobic001G435500--Sobic007G136900 Sobic001G435500--Sobic002G033900 Sobic001G435500--Sobic004G056900 Sobic001G435500--Sobic009G229700 Sobic001G435500--Sobic001G066600 Sobic006G073500 Sobic006G073500 Sobic001G435500--Sobic006G073500 Sobic009G202400 Sobic009G202400 Sobic004G197800--Sobic009G202400 Sobic007G037800 Sobic007G037800 Sobic004G197800--Sobic007G037800 Sobic001G198700 Sobic001G198700 Sobic004G197800--Sobic001G198700 Sobic005G093300 Sobic005G093300 Sobic004G197800--Sobic005G093300 Sobic004G197800--Sobic005G192600 Sobic004G197800--Sobic004G210601 Sobic003G106500 Sobic003G106500 Sobic004G197800--Sobic003G106500 Sobic004G197800--Sobic005G167500 Sobic002G265400 Sobic002G265400 Sobic004G197800--Sobic002G265400 Sobic003G385700--Sobic004G201400 Sobic003G385700--Sobic008G036350 Sobic003G385700--Sobic010G128000 Sobic001G344600 Sobic001G344600 Sobic003G385700--Sobic001G344600 Sobic001G169200 Sobic001G169200 Sobic003G385700--Sobic001G169200 Sobic003G385700--Sobic001G435500 Sobic003G163700 Sobic003G163700 Sobic003G385700--Sobic003G163700 Sobic003G385700--Sobic001G260850 Sobic007G220700 Sobic007G220700 Sobic003G385700--Sobic007G220700 Sobic002G337001--Sobic001G435500 Sobic003G088800 Sobic003G088800 Sobic002G337001--Sobic003G088800 Sobic009G202600 Sobic009G202600 Sobic002G337001--Sobic009G202600 Sobic005G055900 Sobic005G055900 Sobic002G337001--Sobic005G055900 Sobic001G019300 Sobic001G019300 Sobic002G337001--Sobic001G019300 Sobic005G063900 Sobic005G063900 Sobic002G337001--Sobic005G063900 Sobic002G337001--Sobic009G202400 Sobic002G337001--Sobic010G128000 Sobic002G337001--Sobic001G260850 Sobic004G210601--Sobic005G167500 Sobic004G210601--Sobic009G202400 Sobic003G058001 Sobic003G058001 Sobic004G210601--Sobic003G058001 Sobic004G210601--Sobic007G037800 Sobic010G157000 Sobic010G157000 Sobic004G210601--Sobic010G157000 Sobic004G210601--Sobic008G036300 Sobic003G097800 Sobic003G097800 Sobic004G210601--Sobic003G097800 Sobic004G210601--Sobic008G036350 Sobic005G065500 Sobic005G065500 Sobic004G210601--Sobic005G065500 Sobic002G132900 Sobic002G132900 Sobic007G090475--Sobic002G132900 Sobic007G090475--Sobic010G128000 Sobic007G090475--Sobic001G435500 Sobic007G090475--Sobic003G163700 Sobic007G090475--Sobic001G066600 Sobic007G090475--Sobic001G260850 Sobic002G082950 Sobic002G082950 Sobic007G090475--Sobic002G082950 Sobic007G090475--Sobic009G229700 Sobic008G002700 Sobic008G002700 Sobic007G090475--Sobic008G002700
Octagon: transcription factors


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