Gene annotation
Transcriptome id Sobic.003G385700.1
Synonym
Functional annotation -
UniProt A0A1B6Q7I7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G201400 cadmium tolerance factor, putative, expressed -
2 Sobic.008G036350 - -
3 Sobic.010G128000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
4 Sobic.001G344600 late embryogenesis abundant protein, putative, expressed -
5 Sobic.001G169200 "domain confirmed by Pfam database, expression induced by BR treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
6 Sobic.001G435500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
7 Sobic.003G163700 Glutaredoxin family protein (Os)(PubMedID : 27208977)@expressed protein K03676: grxC, GLRX, glutaredoxin 3
8 Sobic.001G260850 - -
9 Sobic.007G220700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SAM dependent carboxyl methyltransferase, putative, expressed -
10 Sobic.007G090475 - -
11 Sobic.004G197800 expressed protein -
12 Sobic.002G082950 - -
13 Sobic.001G274600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
14 Sobic.001G338700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
15 Sobic.010G108401 - -
16 Sobic.008G036300 Ser/Thr protein phosphatase family protein, putative, expressed -
17 Sobic.004G026700 down-regulated TF in developmental senescence(PubMedID : 27586543)@transcription factor, putative, expressed K09060: plant G-box-binding factor
18 Sobic.001G361700 expressed protein -
19 Sobic.003G404900 regulatory protein, putative, expressed -
20 Sobic.010G183032 - -


Gene co-expression network
sample Sobic003G385700 Sobic003G385700 Sobic004G201400 Sobic004G201400 Sobic003G385700--Sobic004G201400 Sobic008G036350 Sobic008G036350 Sobic003G385700--Sobic008G036350 Sobic010G128000 Sobic010G128000 Sobic003G385700--Sobic010G128000 Sobic001G344600 Sobic001G344600 Sobic003G385700--Sobic001G344600 Sobic001G169200 Sobic001G169200 Sobic003G385700--Sobic001G169200 Sobic001G435500 Sobic001G435500 Sobic003G385700--Sobic001G435500 Sobic003G163700 Sobic003G163700 Sobic003G385700--Sobic003G163700 Sobic001G260850 Sobic001G260850 Sobic003G385700--Sobic001G260850 Sobic007G220700 Sobic007G220700 Sobic003G385700--Sobic007G220700 Sobic004G201400--Sobic010G128000 Sobic004G201400--Sobic001G260850 Sobic004G201400--Sobic008G036350 Sobic004G201400--Sobic001G435500 Sobic004G197800 Sobic004G197800 Sobic004G201400--Sobic004G197800 Sobic004G201400--Sobic003G385700 Sobic002G337001 Sobic002G337001 Sobic004G201400--Sobic002G337001 Sobic004G210601 Sobic004G210601 Sobic004G201400--Sobic004G210601 Sobic007G090475 Sobic007G090475 Sobic004G201400--Sobic007G090475 Sobic008G036300 Sobic008G036300 Sobic008G036350--Sobic008G036300 Sobic005G167500 Sobic005G167500 Sobic008G036350--Sobic005G167500 Sobic005G192600 Sobic005G192600 Sobic008G036350--Sobic005G192600 Sobic008G036350--Sobic001G435500 Sobic001G338700 Sobic001G338700 Sobic008G036350--Sobic001G338700 Sobic004G056900 Sobic004G056900 Sobic008G036350--Sobic004G056900 Sobic001G070500 Sobic001G070500 Sobic008G036350--Sobic001G070500 Sobic001G498300 Sobic001G498300 Sobic008G036350--Sobic001G498300 Sobic002G242000 Sobic002G242000 Sobic008G036350--Sobic002G242000 Sobic010G128000--Sobic001G435500 Sobic001G066600 Sobic001G066600 Sobic010G128000--Sobic001G066600 Sobic008G117300 Sobic008G117300 Sobic010G128000--Sobic008G117300 Sobic009G229700 Sobic009G229700 Sobic010G128000--Sobic009G229700 Sobic010G128000--Sobic007G090475 Sobic010G128000--Sobic001G070500 Sobic010G189300 Sobic010G189300 Sobic010G128000--Sobic010G189300 Sobic010G128000--Sobic001G260850 Sobic002G033900 Sobic002G033900 Sobic010G128000--Sobic002G033900 Sobic001G344600--Sobic001G338700 Sobic002G040100 Sobic002G040100 Sobic001G344600--Sobic002G040100 Sobic002G233300 Sobic002G233300 Sobic001G344600--Sobic002G233300 Sobic010G038500 Sobic010G038500 Sobic001G344600--Sobic010G038500 Sobic010G183032 Sobic010G183032 Sobic001G344600--Sobic010G183032 Sobic008G038300 Sobic008G038300 Sobic001G344600--Sobic008G038300 Sobic010G108401 Sobic010G108401 Sobic001G344600--Sobic010G108401 Sobic003G199800 Sobic003G199800 Sobic001G344600--Sobic003G199800 Sobic004G026700 Sobic004G026700 Sobic001G344600--Sobic004G026700 Sobic001G169200--Sobic003G163700 Sobic003G163500 Sobic003G163500 Sobic001G169200--Sobic003G163500 Sobic005G086300 Sobic005G086300 Sobic001G169200--Sobic005G086300 Sobic005G111200 Sobic005G111200 Sobic001G169200--Sobic005G111200 Sobic009G171300 Sobic009G171300 Sobic001G169200--Sobic009G171300 Sobic010G214600 Sobic010G214600 Sobic001G169200--Sobic010G214600 Sobic001G169200--Sobic001G066600 Sobic001G169200--Sobic008G117300 Sobic005G099700 Sobic005G099700 Sobic001G169200--Sobic005G099700 Sobic001G435500--Sobic001G070500 Sobic001G435500--Sobic010G189300 Sobic001G435500--Sobic005G099700 Sobic007G136900 Sobic007G136900 Sobic001G435500--Sobic007G136900 Sobic001G435500--Sobic002G033900 Sobic001G435500--Sobic004G056900 Sobic001G435500--Sobic009G229700 Sobic001G435500--Sobic001G066600 Sobic006G073500 Sobic006G073500 Sobic001G435500--Sobic006G073500 Sobic003G163700--Sobic005G099700 Sobic003G163700--Sobic001G435500 Sobic003G163700--Sobic005G111200 Sobic003G163700--Sobic008G117300 Sobic008G015100 Sobic008G015100 Sobic003G163700--Sobic008G015100 Sobic003G163700--Sobic009G171300 Sobic004G272600 Sobic004G272600 Sobic003G163700--Sobic004G272600 Sobic003G163700--Sobic001G066600 Sobic005G204000 Sobic005G204000 Sobic003G163700--Sobic005G204000 Sobic001G260850--Sobic005G204000 Sobic005G203900 Sobic005G203900 Sobic001G260850--Sobic005G203900 Sobic001G260850--Sobic008G117300 Sobic001G260850--Sobic001G435500 Sobic001G260850--Sobic010G128000 Sobic001G260850--Sobic002G337001 Sobic003G369000 Sobic003G369000 Sobic001G260850--Sobic003G369000 Sobic001G260850--Sobic008G036350 Sobic001G260850--Sobic001G066600 Sobic001G024500 Sobic001G024500 Sobic007G220700--Sobic001G024500 Sobic007G220700--Sobic010G128000 Sobic007G220700--Sobic001G435500 Sobic010G179800 Sobic010G179800 Sobic007G220700--Sobic010G179800 Sobic008G002700 Sobic008G002700 Sobic007G220700--Sobic008G002700 Sobic007G220700--Sobic005G099700 Sobic007G220700--Sobic003G163700 Sobic007G220700--Sobic007G090475 Sobic007G220700--Sobic001G260850
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.