Gene annotation
Transcriptome id Sobic.003G404900.1
Synonym Sb03g044040
Functional annotation regulatory protein, putative, expressed
UniProt C5XGA7
Pfam PF03407
Panther DB PTHR24015 PTHR24015:SF531
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G19970 : -
RAP-DB (Rice) LOC_Os01g69190.1 : regulatory protein, putative, expressed
MaizeGDB (Corn) Zm00025a039293 , Zm00025a039297
Brachypodium KQK11245
Barley HORVU1Hr1G092200.4 , HORVU3Hr1G094370.1 , HORVU1Hr1G092200.1 , HORVU3Hr1G094340.3 , HORVU3Hr1G094340.2 , HORVU3Hr1G094340.1 , HORVU1Hr1G092200.5 , HORVU1Hr1G092200.2 , HORVU1Hr1G092200.3 , HORVU3Hr1G094340.4
Wheat TraesCS3D02G422900 , TraesCS3D02G422900 , TraesCS3A02G427300 , TraesCS3D02G424000 , TraesCS3D02G424000 , TraesCS3B02G464200 , TraesCS1D02G328100 , TraesCS3A02G428300 , TraesCS3D02G423700 , TraesCS3B02G464100 , TraesCS3B02G465300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G000500 isoflavone reductase, putative, expressed -
2 Sobic.001G361700 expressed protein -
3 Sobic.004G035601 - -
4 Sobic.006G051300 expressed protein -
5 Sobic.008G016250 - -
6 Sobic.010G108401 - -
7 Sobic.004G026700 down-regulated TF in developmental senescence(PubMedID : 27586543)@transcription factor, putative, expressed K09060: plant G-box-binding factor
8 Sobic.010G183032 - -
9 Sobic.007G171600 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
10 Sobic.001G184100 Osmotic stress potassium transporter(PubMedID : 28620409)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
11 Sobic.006G011100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.003G069000 transferase family protein, putative, expressed -
13 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
14 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
15 Sobic.001G274600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.001G233400 Citrate transporter protein, putative, expressed -
17 Sobic.004G035700 - -
18 Sobic.008G038300 uncharacterized protein ycf53, putative, expressed -
19 Sobic.006G102400 transporter family protein, putative, expressed -
20 Sobic.006G134400 protein FAM133, putative, expressed -


Gene co-expression network
sample Sobic003G404900 Sobic003G404900 Sobic002G000500 Sobic002G000500 Sobic003G404900--Sobic002G000500 Sobic001G361700 Sobic001G361700 Sobic003G404900--Sobic001G361700 Sobic004G035601 Sobic004G035601 Sobic003G404900--Sobic004G035601 Sobic006G051300 Sobic006G051300 Sobic003G404900--Sobic006G051300 Sobic008G016250 Sobic008G016250 Sobic003G404900--Sobic008G016250 Sobic010G108401 Sobic010G108401 Sobic003G404900--Sobic010G108401 Sobic004G026700 Sobic004G026700 Sobic003G404900--Sobic004G026700 Sobic010G183032 Sobic010G183032 Sobic003G404900--Sobic010G183032 Sobic007G171600 Sobic007G171600 Sobic003G404900--Sobic007G171600 Sobic002G040100 Sobic002G040100 Sobic002G000500--Sobic002G040100 Sobic006G011100 Sobic006G011100 Sobic002G000500--Sobic006G011100 Sobic010G109500 Sobic010G109500 Sobic002G000500--Sobic010G109500 Sobic010G276400 Sobic010G276400 Sobic002G000500--Sobic010G276400 Sobic003G199800 Sobic003G199800 Sobic002G000500--Sobic003G199800 Sobic008G038300 Sobic008G038300 Sobic002G000500--Sobic008G038300 Sobic002G000500--Sobic007G171600 Sobic003G209800 Sobic003G209800 Sobic002G000500--Sobic003G209800 Sobic001G274600 Sobic001G274600 Sobic002G000500--Sobic001G274600 Sobic001G361700--Sobic004G026700 Sobic001G361700--Sobic002G000500 Sobic001G068400 Sobic001G068400 Sobic001G361700--Sobic001G068400 Sobic001G361700--Sobic010G183032 Sobic001G361700--Sobic002G040100 Sobic001G361700--Sobic010G108401 Sobic010G183100 Sobic010G183100 Sobic001G361700--Sobic010G183100 Sobic001G361700--Sobic006G011100 Sobic010G038500 Sobic010G038500 Sobic001G361700--Sobic010G038500 Sobic004G035601--Sobic006G051300 Sobic004G035601--Sobic003G199800 Sobic004G035601--Sobic008G016250 Sobic004G035700 Sobic004G035700 Sobic004G035601--Sobic004G035700 Sobic004G035601--Sobic004G026700 Sobic004G035601--Sobic002G000500 Sobic004G035601--Sobic010G183100 Sobic004G035601--Sobic002G040100 Sobic004G035601--Sobic008G038300 Sobic006G051300--Sobic004G035601 Sobic008G104601 Sobic008G104601 Sobic006G051300--Sobic008G104601 Sobic001G344600 Sobic001G344600 Sobic006G051300--Sobic001G344600 Sobic006G051300--Sobic010G183100 Sobic001G463200 Sobic001G463200 Sobic006G051300--Sobic001G463200 Sobic006G051300--Sobic003G199800 Sobic001G520800 Sobic001G520800 Sobic006G051300--Sobic001G520800 Sobic006G051300--Sobic004G026700 Sobic003G069000 Sobic003G069000 Sobic006G051300--Sobic003G069000 Sobic008G016250--Sobic004G035601 Sobic005G111200 Sobic005G111200 Sobic008G016250--Sobic005G111200 Sobic008G016250--Sobic003G404900 Sobic008G016250--Sobic006G051300 Sobic008G016250--Sobic001G463200 Sobic008G016250--Sobic004G026700 Sobic003G163700 Sobic003G163700 Sobic008G016250--Sobic003G163700 Sobic008G016250--Sobic010G108401 Sobic001G184100 Sobic001G184100 Sobic008G016250--Sobic001G184100 Sobic010G108401--Sobic010G183032 Sobic010G108401--Sobic008G038300 Sobic010G108401--Sobic004G035700 Sobic010G108401--Sobic001G274600 Sobic001G297400 Sobic001G297400 Sobic010G108401--Sobic001G297400 Sobic010G108401--Sobic002G040100 Sobic010G108401--Sobic001G068400 Sobic010G108401--Sobic010G183100 Sobic010G108401--Sobic002G000500 Sobic004G026700--Sobic002G000500 Sobic004G026700--Sobic001G274600 Sobic004G026700--Sobic001G361700 Sobic004G026700--Sobic002G040100 Sobic004G026700--Sobic006G011100 Sobic004G026700--Sobic003G199800 Sobic004G026700--Sobic004G035601 Sobic004G026700--Sobic003G209800 Sobic001G338700 Sobic001G338700 Sobic004G026700--Sobic001G338700 Sobic010G183032--Sobic010G108401 Sobic010G183032--Sobic008G038300 Sobic010G183032--Sobic004G035700 Sobic010G183032--Sobic001G274600 Sobic010G183032--Sobic002G040100 Sobic010G183032--Sobic001G297400 Sobic010G183032--Sobic001G068400 Sobic010G183032--Sobic010G183100 Sobic010G183032--Sobic002G000500 Sobic007G171600--Sobic002G000500 Sobic003G069100 Sobic003G069100 Sobic007G171600--Sobic003G069100 Sobic007G171600--Sobic010G109500 Sobic007G171600--Sobic010G276400 Sobic007G171600--Sobic003G199800 Sobic004G023200 Sobic004G023200 Sobic007G171600--Sobic004G023200 Sobic007G171600--Sobic002G040100 Sobic007G171600--Sobic001G338700 Sobic006G234100 Sobic006G234100 Sobic007G171600--Sobic006G234100
Octagon: transcription factors


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