Gene annotation
Transcriptome id Sobic.006G102400.1
Synonym Sb06g018600
Functional annotation transporter family protein, putative, expressed
UniProt C5Y9Q3
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF33
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G34580 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g37990.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a056184 , Zm00025a050070 , Zm00025a011150 , Zm00025a011152
Brachypodium PNT61205 , PNT61204 , PNT61207 , PNT61206 , PNT61203 , KQJ82917 , KQJ82918 , KQJ82919
Barley HORVU2Hr1G079650.4 , HORVU2Hr1G079650.1 , HORVU2Hr1G079650.3 , HORVU2Hr1G079650.2 , HORVU2Hr1G079670.2 , HORVU2Hr1G079670.1 , HORVU2Hr1G079700.4 , HORVU2Hr1G079700.3 , HORVU2Hr1G079700.2 , HORVU2Hr1G079700.1 , HORVU2Hr1G079720.1
Wheat TraesCS2A02G340800 , TraesCS2B02G338600 , TraesCS2A02G340700 , TraesCS2B02G338500 , TraesCS2D02G318300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G164200 osFTL12 FT-Like12 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
2 Sobic.008G183200 LOL3, putative, expressed -
3 Sobic.004G122200 expressed protein -
4 Sobic.010G241300 -(PubMedID : 26465154)@OsCML29 - Calmodulin-related calcium sensor protein, expressed -
5 Sobic.001G217700 possible lysine decarboxylase domain containing protein, expressed -
6 Sobic.006G051300 expressed protein -
7 Sobic.006G249050 - -
8 Sobic.003G052300 Raffinose synthase family protein(PubMedID : 26465154)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
9 Sobic.003G397200 - -
10 Sobic.003G404900 regulatory protein, putative, expressed -
11 Sobic.002G000700 expressed protein -
12 Sobic.001G240800 tyrosine protein kinase domain containing protein, putative, expressed -
13 Sobic.001G338700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
14 Sobic.001G344600 late embryogenesis abundant protein, putative, expressed -
15 Sobic.008G094300 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
16 Sobic.001G233400 Citrate transporter protein, putative, expressed -
17 Sobic.002G204600 expressed protein -
18 Sobic.007G213700 -(PubMedID : 26976818)@aminotransferase, putative, expressed K00830: alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase
19 Sobic.008G104801 - -
20 Sobic.002G376700 EF hand family protein, putative -


Gene co-expression network
sample Sobic006G102400 Sobic006G102400 Sobic010G164200 Sobic010G164200 Sobic006G102400--Sobic010G164200 Sobic008G183200 Sobic008G183200 Sobic006G102400--Sobic008G183200 Sobic004G122200 Sobic004G122200 Sobic006G102400--Sobic004G122200 Sobic010G241300 Sobic010G241300 Sobic006G102400--Sobic010G241300 Sobic001G217700 Sobic001G217700 Sobic006G102400--Sobic001G217700 Sobic006G051300 Sobic006G051300 Sobic006G102400--Sobic006G051300 Sobic006G249050 Sobic006G249050 Sobic006G102400--Sobic006G249050 Sobic003G052300 Sobic003G052300 Sobic006G102400--Sobic003G052300 Sobic003G397200 Sobic003G397200 Sobic006G102400--Sobic003G397200 Sobic010G164200--Sobic006G102400 Sobic010G164200--Sobic004G122200 Sobic005G111200 Sobic005G111200 Sobic010G164200--Sobic005G111200 Sobic010G164200--Sobic008G183200 Sobic002G000700 Sobic002G000700 Sobic010G164200--Sobic002G000700 Sobic006G160400 Sobic006G160400 Sobic010G164200--Sobic006G160400 Sobic010G107400 Sobic010G107400 Sobic010G164200--Sobic010G107400 Sobic010G164200--Sobic006G249050 Sobic004G001300 Sobic004G001300 Sobic010G164200--Sobic004G001300 Sobic008G183200--Sobic004G122200 Sobic008G183200--Sobic010G241300 Sobic005G127000 Sobic005G127000 Sobic008G183200--Sobic005G127000 Sobic005G111500 Sobic005G111500 Sobic008G183200--Sobic005G111500 Sobic007G059500 Sobic007G059500 Sobic008G183200--Sobic007G059500 Sobic003G110700 Sobic003G110700 Sobic008G183200--Sobic003G110700 Sobic001G377500 Sobic001G377500 Sobic008G183200--Sobic001G377500 Sobic008G183200--Sobic010G164200 Sobic008G183200--Sobic006G102400 Sobic004G122200--Sobic008G183200 Sobic004G122200--Sobic005G127000 Sobic004G122200--Sobic010G241300 Sobic008G066100 Sobic008G066100 Sobic004G122200--Sobic008G066100 Sobic004G122200--Sobic010G164200 Sobic008G015100 Sobic008G015100 Sobic004G122200--Sobic008G015100 Sobic001G068301 Sobic001G068301 Sobic004G122200--Sobic001G068301 Sobic001G338700 Sobic001G338700 Sobic004G122200--Sobic001G338700 Sobic004G122200--Sobic001G377500 Sobic010G241300--Sobic008G183200 Sobic010G241300--Sobic007G059500 Sobic010G241300--Sobic005G127000 Sobic010G241300--Sobic004G122200 Sobic010G241300--Sobic003G397200 Sobic006G010800 Sobic006G010800 Sobic010G241300--Sobic006G010800 Sobic009G034600 Sobic009G034600 Sobic010G241300--Sobic009G034600 Sobic010G241300--Sobic005G111500 Sobic007G213300 Sobic007G213300 Sobic010G241300--Sobic007G213300 Sobic006G060200 Sobic006G060200 Sobic001G217700--Sobic006G060200 Sobic002G104000 Sobic002G104000 Sobic001G217700--Sobic002G104000 Sobic001G217700--Sobic006G249050 Sobic002G376700 Sobic002G376700 Sobic001G217700--Sobic002G376700 Sobic001G217700--Sobic003G110700 Sobic001G269300 Sobic001G269300 Sobic001G217700--Sobic001G269300 Sobic001G217700--Sobic006G102400 Sobic005G036600 Sobic005G036600 Sobic001G217700--Sobic005G036600 Sobic010G246600 Sobic010G246600 Sobic001G217700--Sobic010G246600 Sobic004G035601 Sobic004G035601 Sobic006G051300--Sobic004G035601 Sobic008G104601 Sobic008G104601 Sobic006G051300--Sobic008G104601 Sobic001G344600 Sobic001G344600 Sobic006G051300--Sobic001G344600 Sobic010G183100 Sobic010G183100 Sobic006G051300--Sobic010G183100 Sobic001G463200 Sobic001G463200 Sobic006G051300--Sobic001G463200 Sobic003G199800 Sobic003G199800 Sobic006G051300--Sobic003G199800 Sobic001G520800 Sobic001G520800 Sobic006G051300--Sobic001G520800 Sobic004G026700 Sobic004G026700 Sobic006G051300--Sobic004G026700 Sobic003G069000 Sobic003G069000 Sobic006G051300--Sobic003G069000 Sobic006G249050--Sobic005G036600 Sobic006G249050--Sobic001G217700 Sobic006G249050--Sobic002G000700 Sobic006G249050--Sobic004G001300 Sobic007G204900 Sobic007G204900 Sobic006G249050--Sobic007G204900 Sobic007G213700 Sobic007G213700 Sobic006G249050--Sobic007G213700 Sobic007G052900 Sobic007G052900 Sobic006G249050--Sobic007G052900 Sobic006G249050--Sobic008G183200 Sobic006G249050--Sobic004G122200 Sobic003G052300--Sobic008G183200 Sobic003G052300--Sobic006G102400 Sobic008G117800 Sobic008G117800 Sobic003G052300--Sobic008G117800 Sobic003G052300--Sobic007G059500 Sobic003G052300--Sobic001G338700 Sobic003G052300--Sobic001G217700 Sobic003G052300--Sobic010G241300 Sobic010G096300 Sobic010G096300 Sobic003G052300--Sobic010G096300 Sobic004G186200 Sobic004G186200 Sobic003G052300--Sobic004G186200 Sobic003G397200--Sobic010G241300 Sobic008G186400 Sobic008G186400 Sobic003G397200--Sobic008G186400 Sobic003G397200--Sobic008G183200 Sobic005G188600 Sobic005G188600 Sobic003G397200--Sobic005G188600 Sobic003G397200--Sobic006G102400 Sobic008G187900 Sobic008G187900 Sobic003G397200--Sobic008G187900 Sobic003G397200--Sobic009G034600 Sobic003G263001 Sobic003G263001 Sobic003G397200--Sobic003G263001 Sobic003G397200--Sobic007G059500
Octagon: transcription factors


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