Gene annotation
| Transcriptome id | Sobic.010G164200.1 |
|---|---|
| Synonym | FT, Sb10g021790 |
| Functional annotation | osFTL12 FT-Like12 homologous to Flowering Locus T gene contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed |
| UniProt | C5Z4I8 |
| Pfam | PF01161 |
| Panther DB | PTHR11362 PTHR11362:SF33 |
| NCBI CDD | KOG3346; Phosphatidylethanolamine binding protein |
| KEGG Orthology | K16223; protein FLOWERING LOCUS T |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT1G65480 : PEBP (phosphatidylethanolamine-binding protein) family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os06g35940.1 : osFTL12 FT-Like12 homologous to Flowering Locus T gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed |
| MaizeGDB (Corn) | Zm00025a051079 |
| Brachypodium | KQK18033 |
| Barley | HORVU2Hr1G023180.6 , HORVU2Hr1G023180.4 , HORVU2Hr1G023180.5 , HORVU2Hr1G023180.2 , HORVU2Hr1G023180.3 , HORVU2Hr1G023180.1 |
| Wheat | TraesCS7A02G355100 , TraesCS2A02G132300 , TraesCS2B02G154800 , TraesCS2D02G134200 , TraesCS7B02G272600 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.006G102400 | transporter family protein, putative, expressed | - |
| 2 | Sobic.004G122200 | expressed protein | - |
| 3 | Sobic.005G111200 | PB1 domain containing protein, expressed | - |
| 4 | Sobic.008G183200 | LOL3, putative, expressed | - |
| 5 | Sobic.002G000700 | expressed protein | - |
| 6 | Sobic.006G160400 | peroxisomal biogenesis factor 11, putative, expressed | - |
| 7 | Sobic.010G107400 | 3-ketoacyl-CoA synthase, putative, expressed | K15397: 3-ketoacyl-CoA synthase |
| 8 | Sobic.006G249050 | - | - |
| 9 | Sobic.004G001300 | -(PubMedID : 26976818)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed | K15893: glycerate dehydrogenase |
| 10 | Sobic.001G463200 | BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed | - |
| 11 | Sobic.008G066100 | 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed | - |
| 12 | Sobic.003G185100 | peptide transporter PTR2, putative, expressed | - |
| 13 | Sobic.006G051300 | expressed protein | - |
| 14 | Sobic.003G185700 | zinc finger family protein, putative, expressed | - |
| 15 | Sobic.001G425400 | high cyclic electron flow 1(PubMedID : 26465154)@"D-fructose-1,6-bisphosphate 1-phosphohydrolase (Os)"(PubMedID : 27208977)@fructose-1,6-bisphosphatase, putative, expressed | K03841: FBP, fructose-1,6-bisphosphatase I |
| 16 | Sobic.003G305000 | Unnamed(PubMedID : 24676859)@CIN-like (ClassII) Subclade 9 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed | - |
| 17 | Sobic.005G188600 | - | - |
| 18 | Sobic.008G094000 | Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed | K15382: SLC50A, solute carrier family 50 (sugar transporter) |
| 19 | Sobic.008G016250 | - | - |
| 20 | Sobic.007G213700 | -(PubMedID : 26976818)@aminotransferase, putative, expressed | K00830: alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase |
Gene co-expression network
Octagon: transcription factors
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