Gene annotation
Transcriptome id Sobic.001G425400.2,Sobic.001G425400.1
Synonym HCEF1, Sb01g039980,
Functional annotation high cyclic electron flow 1 (PubMedID : 26465154)
"D-fructose-1,6-bisphosphate 1-phosphohydrolase (Os)" (PubMedID : 27208977)
fructose-1,6-bisphosphatase, putative, expressed
UniProt A0A1B6QP79 , A0A1B6QP66
Pfam PF00316
Panther DB PTHR11556 PTHR11556:SF16
NCBI CDD -
KEGG Orthology K03841; FBP, fructose-1,6-bisphosphatase I
Gene Ontology GO:0005975; carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT3G54050 : high cyclic electron flow 1
RAP-DB (Rice) LOC_Os03g16050.1 : fructose-1,6-bisphosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a001764
Brachypodium PNT77688
Barley HORVU4Hr1G060630.3 , HORVU4Hr1G060630.2 , HORVU4Hr1G060630.1 , HORVU4Hr1G060630.6 , HORVU4Hr1G060630.5 , HORVU4Hr1G060630.4
Wheat TraesCS4D02G212000 , TraesCS4A02G093100 , TraesCS4B02G211400
Populus -


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cDNA sequences
Sobic.001G425400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G066100 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed -
2 Sobic.003G359100 sedoheptulose-bisphosphatase(PubMedID : 26465154)@fructose-1,6-bisphosphatase, putative, expressed K01100: sedoheptulose-bisphosphatase
3 Sobic.008G134800 shikimate kinase, putative, expressed -
4 Sobic.007G207800 thylakoid lumen protein, chloroplast precursor, putative, expressed -
5 Sobic.004G308700 photosystem I light harvesting complex gene 5(PubMedID : 26465154)@chlorophyll A-B binding protein, putative, expressed K08911: light-harvesting complex I chlorophyll a/b binding protein 5
6 Sobic.007G223500 expressed protein -
7 Sobic.004G272100 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
8 Sobic.004G035500 -(PubMedID : 26976818)@Involved in photorespiratory pathway(PubMedID : 12887583)@dicarboxylate transporter 3(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
9 Sobic.001G098800 ATP synthase F1, delta subunit family protein, putative, expressed -
10 Sobic.009G164300 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
11 Sobic.001G519800 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K05298: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating)
12 Sobic.003G387800 unknown(PubMedID : 29017446)@rhodanese-like domain containing protein, putative, expressed -
13 Sobic.003G435800 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain(PubMedID : 26465154)@Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chlorophyllide a oxygenase, chloroplast precursor, putative, expressed K13600: chlorophyllide a oxygenase
14 Sobic.002G051100 Probable ribose-5-phosphate isomerase(PubMedID : 26186930)@ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
15 Sobic.002G030500 Reticulon family protein(PubMedID : 26465154)@reticulon domain containing protein, putative, expressed -
16 Sobic.002G316700 ATP synthase subunit gamma(PubMedID : 26186930)@ATP synthase subunit gamma (Zm)(PubMedID : 27208977)@ATP synthase gamma chain, putative, expressed K02115: ATPF1G, F-type H+-transporting ATPase subunit gamma
17 Sobic.004G235200 ATP synthase delta chain(PubMedID : 26186930)@-(PubMedID : 29017446)@ATP synthase F1, delta subunit family protein, putative, expressed K02113: ATPF1D, F-type H+-transporting ATPase subunit delta
18 Sobic.008G053200 fructose-bisphosphate aldolase 2(PubMedID : 26465154)@fructose-bisphosphate aldolase 2("PubMedID : 26759170,PubMedID : 24597475")@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
19 Sobic.004G249800 expressed protein -
20 Sobic.007G071500 photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed K03541: photosystem II 10kDa protein


Gene co-expression network
sample Sobic001G425400 Sobic001G425400 Sobic008G066100 Sobic008G066100 Sobic001G425400--Sobic008G066100 Sobic003G359100 Sobic003G359100 Sobic001G425400--Sobic003G359100 Sobic008G134800 Sobic008G134800 Sobic001G425400--Sobic008G134800 Sobic007G207800 Sobic007G207800 Sobic001G425400--Sobic007G207800 Sobic004G308700 Sobic004G308700 Sobic001G425400--Sobic004G308700 Sobic007G223500 Sobic007G223500 Sobic001G425400--Sobic007G223500 Sobic004G272100 Sobic004G272100 Sobic001G425400--Sobic004G272100 Sobic004G035500 Sobic004G035500 Sobic001G425400--Sobic004G035500 Sobic001G098800 Sobic001G098800 Sobic001G425400--Sobic001G098800 Sobic008G066100--Sobic001G425400 Sobic008G066100--Sobic003G359100 Sobic008G066100--Sobic004G308700 Sobic008G066100--Sobic007G207800 Sobic008G066100--Sobic008G134800 Sobic008G066100--Sobic004G272100 Sobic008G066100--Sobic004G035500 Sobic008G066100--Sobic007G223500 Sobic002G030500 Sobic002G030500 Sobic008G066100--Sobic002G030500 Sobic003G359100--Sobic004G035500 Sobic003G359100--Sobic008G134800 Sobic003G359100--Sobic008G066100 Sobic003G359100--Sobic001G425400 Sobic003G359100--Sobic007G207800 Sobic004G249800 Sobic004G249800 Sobic003G359100--Sobic004G249800 Sobic007G071500 Sobic007G071500 Sobic003G359100--Sobic007G071500 Sobic003G359100--Sobic004G272100 Sobic006G105900 Sobic006G105900 Sobic003G359100--Sobic006G105900 Sobic008G134800--Sobic003G359100 Sobic008G134800--Sobic007G207800 Sobic008G134800--Sobic007G071500 Sobic008G134800--Sobic007G223500 Sobic008G134800--Sobic001G425400 Sobic008G134800--Sobic004G035500 Sobic008G134800--Sobic008G066100 Sobic009G143100 Sobic009G143100 Sobic008G134800--Sobic009G143100 Sobic008G134800--Sobic004G249800 Sobic007G207800--Sobic008G134800 Sobic007G207800--Sobic007G223500 Sobic007G207800--Sobic002G030500 Sobic007G207800--Sobic008G066100 Sobic007G207800--Sobic001G425400 Sobic007G207800--Sobic003G359100 Sobic001G519800 Sobic001G519800 Sobic007G207800--Sobic001G519800 Sobic002G316700 Sobic002G316700 Sobic007G207800--Sobic002G316700 Sobic007G207800--Sobic007G071500 Sobic004G308700--Sobic004G272100 Sobic004G308700--Sobic008G066100 Sobic004G308700--Sobic001G519800 Sobic010G201700 Sobic010G201700 Sobic004G308700--Sobic010G201700 Sobic004G308700--Sobic001G425400 Sobic003G431700 Sobic003G431700 Sobic004G308700--Sobic003G431700 Sobic001G102800 Sobic001G102800 Sobic004G308700--Sobic001G102800 Sobic007G004800 Sobic007G004800 Sobic004G308700--Sobic007G004800 Sobic002G051100 Sobic002G051100 Sobic004G308700--Sobic002G051100 Sobic007G223500--Sobic002G316700 Sobic007G223500--Sobic007G207800 Sobic004G227200 Sobic004G227200 Sobic007G223500--Sobic004G227200 Sobic007G223500--Sobic008G134800 Sobic007G223500--Sobic009G143100 Sobic007G223500--Sobic001G425400 Sobic007G223500--Sobic007G071500 Sobic003G387800 Sobic003G387800 Sobic007G223500--Sobic003G387800 Sobic007G223500--Sobic008G066100 Sobic004G272100--Sobic004G308700 Sobic004G272100--Sobic010G201700 Sobic004G272100--Sobic001G519800 Sobic004G272100--Sobic002G051100 Sobic003G002300 Sobic003G002300 Sobic004G272100--Sobic003G002300 Sobic008G102000 Sobic008G102000 Sobic004G272100--Sobic008G102000 Sobic009G043000 Sobic009G043000 Sobic004G272100--Sobic009G043000 Sobic004G272100--Sobic001G102800 Sobic004G272100--Sobic008G066100 Sobic004G035500--Sobic003G359100 Sobic004G035500--Sobic008G134800 Sobic004G035500--Sobic007G071500 Sobic004G035500--Sobic004G249800 Sobic004G035500--Sobic008G066100 Sobic008G021300 Sobic008G021300 Sobic004G035500--Sobic008G021300 Sobic004G035500--Sobic007G207800 Sobic004G035500--Sobic004G272100 Sobic004G035500--Sobic006G105900 Sobic001G098800--Sobic007G207800 Sobic001G098800--Sobic008G066100 Sobic001G098800--Sobic007G223500 Sobic001G098800--Sobic001G425400 Sobic001G098800--Sobic007G071500 Sobic004G175500 Sobic004G175500 Sobic001G098800--Sobic004G175500 Sobic001G098800--Sobic003G359100 Sobic001G098800--Sobic003G387800 Sobic001G098800--Sobic008G134800
Octagon: transcription factors


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