Gene annotation
Transcriptome id Sobic.003G185100.2,Sobic.003G185100.1
Synonym Sb03g024850
Functional annotation peptide transporter PTR2, putative, expressed
UniProt A0A1B6Q453 , A0A1B6Q493
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF85
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G26690 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os01g37590.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a028806 , Zm00025a036455
Brachypodium PNT72191 , PNT72190 , KQJ85459
Barley HORVU4Hr1G088020.12 , HORVU4Hr1G088020.13 , HORVU4Hr1G088020.4 , HORVU4Hr1G088020.5 , HORVU4Hr1G088020.6 , HORVU4Hr1G088020.7 , HORVU4Hr1G088020.1 , HORVU4Hr1G088020.2 , HORVU4Hr1G088020.3 , HORVU4Hr1G088020.8 , HORVU4Hr1G088020.9 , HORVU4Hr1G088020.10 , HORVU4Hr1G088020.11 , HORVU1Hr1G004720.4 , HORVU1Hr1G004720.5 , HORVU1Hr1G004720.2 , HORVU1Hr1G004720.3 , HORVU1Hr1G004720.1
Wheat TraesCS4B02G371000 , TraesCS1A02G031300 , TraesCS1B02G038700 , TraesCS4B02G375800 , TraesCS1D02G032700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G126300 expressed protein -
2 Sobic.010G164200 osFTL12 FT-Like12 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
3 Sobic.003G397200 - -
4 Sobic.006G160400 peroxisomal biogenesis factor 11, putative, expressed -
5 Sobic.007G002000 heavy metal-associated domain containing protein, expressed -
6 Sobic.005G188600 - -
7 Sobic.003G185700 zinc finger family protein, putative, expressed -
8 Sobic.004G122200 expressed protein -
9 Sobic.006G102400 transporter family protein, putative, expressed -
10 Sobic.006G249050 - -
11 Sobic.008G187900 protein kinase domain containing protein, expressed -
12 Sobic.005G222900 RGH1A, putative, expressed -
13 Sobic.008G183200 LOL3, putative, expressed -
14 Sobic.005G110502 - -
15 Sobic.009G228100 -(PubMedID : 23915383)@ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
16 Sobic.001G498000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
17 Sobic.003G327000 bZIP transcription factor domain containing protein, expressed -
18 Sobic.007G126400 CPuORF27 - conserved peptide uORF-containing transcript, expressed K09338: homeobox-leucine zipper protein
19 Sobic.004G283100 -(PubMedID : 26465154)@expressed protein -
20 Sobic.001G098301 - -


Gene co-expression network
sample Sobic003G185100 Sobic003G185100 Sobic005G126300 Sobic005G126300 Sobic003G185100--Sobic005G126300 Sobic010G164200 Sobic010G164200 Sobic003G185100--Sobic010G164200 Sobic003G397200 Sobic003G397200 Sobic003G185100--Sobic003G397200 Sobic006G160400 Sobic006G160400 Sobic003G185100--Sobic006G160400 Sobic007G002000 Sobic007G002000 Sobic003G185100--Sobic007G002000 Sobic005G188600 Sobic005G188600 Sobic003G185100--Sobic005G188600 Sobic003G185700 Sobic003G185700 Sobic003G185100--Sobic003G185700 Sobic004G122200 Sobic004G122200 Sobic003G185100--Sobic004G122200 Sobic006G102400 Sobic006G102400 Sobic003G185100--Sobic006G102400 Sobic001G097100 Sobic001G097100 Sobic005G126300--Sobic001G097100 Sobic010G067100 Sobic010G067100 Sobic005G126300--Sobic010G067100 Sobic003G327000 Sobic003G327000 Sobic005G126300--Sobic003G327000 Sobic004G059800 Sobic004G059800 Sobic005G126300--Sobic004G059800 Sobic003G398800 Sobic003G398800 Sobic005G126300--Sobic003G398800 Sobic009G129300 Sobic009G129300 Sobic005G126300--Sobic009G129300 Sobic005G126300--Sobic005G188600 Sobic003G185900 Sobic003G185900 Sobic005G126300--Sobic003G185900 Sobic005G126300--Sobic003G185700 Sobic010G164200--Sobic006G102400 Sobic010G164200--Sobic004G122200 Sobic005G111200 Sobic005G111200 Sobic010G164200--Sobic005G111200 Sobic008G183200 Sobic008G183200 Sobic010G164200--Sobic008G183200 Sobic002G000700 Sobic002G000700 Sobic010G164200--Sobic002G000700 Sobic010G164200--Sobic006G160400 Sobic010G107400 Sobic010G107400 Sobic010G164200--Sobic010G107400 Sobic006G249050 Sobic006G249050 Sobic010G164200--Sobic006G249050 Sobic004G001300 Sobic004G001300 Sobic010G164200--Sobic004G001300 Sobic010G241300 Sobic010G241300 Sobic003G397200--Sobic010G241300 Sobic008G186400 Sobic008G186400 Sobic003G397200--Sobic008G186400 Sobic003G397200--Sobic008G183200 Sobic003G397200--Sobic005G188600 Sobic003G397200--Sobic006G102400 Sobic008G187900 Sobic008G187900 Sobic003G397200--Sobic008G187900 Sobic009G034600 Sobic009G034600 Sobic003G397200--Sobic009G034600 Sobic003G263001 Sobic003G263001 Sobic003G397200--Sobic003G263001 Sobic007G059500 Sobic007G059500 Sobic003G397200--Sobic007G059500 Sobic004G283100 Sobic004G283100 Sobic006G160400--Sobic004G283100 Sobic005G110502 Sobic005G110502 Sobic006G160400--Sobic005G110502 Sobic001G329400 Sobic001G329400 Sobic006G160400--Sobic001G329400 Sobic006G160400--Sobic005G188600 Sobic003G024300 Sobic003G024300 Sobic006G160400--Sobic003G024300 Sobic004G308700 Sobic004G308700 Sobic006G160400--Sobic004G308700 Sobic002G036000 Sobic002G036000 Sobic006G160400--Sobic002G036000 Sobic008G053200 Sobic008G053200 Sobic006G160400--Sobic008G053200 Sobic008G115900 Sobic008G115900 Sobic006G160400--Sobic008G115900 Sobic009G085400 Sobic009G085400 Sobic007G002000--Sobic009G085400 Sobic003G416100 Sobic003G416100 Sobic007G002000--Sobic003G416100 Sobic008G125600 Sobic008G125600 Sobic007G002000--Sobic008G125600 Sobic009G103600 Sobic009G103600 Sobic007G002000--Sobic009G103600 Sobic010G248600 Sobic010G248600 Sobic007G002000--Sobic010G248600 Sobic007G002000--Sobic003G185100 Sobic009G197000 Sobic009G197000 Sobic007G002000--Sobic009G197000 Sobic002G114700 Sobic002G114700 Sobic007G002000--Sobic002G114700 Sobic008G118000 Sobic008G118000 Sobic007G002000--Sobic008G118000 Sobic001G065600 Sobic001G065600 Sobic005G188600--Sobic001G065600 Sobic001G158900 Sobic001G158900 Sobic005G188600--Sobic001G158900 Sobic006G188000 Sobic006G188000 Sobic005G188600--Sobic006G188000 Sobic003G443500 Sobic003G443500 Sobic005G188600--Sobic003G443500 Sobic006G114900 Sobic006G114900 Sobic005G188600--Sobic006G114900 Sobic006G101500 Sobic006G101500 Sobic005G188600--Sobic006G101500 Sobic005G188600--Sobic008G115900 Sobic001G098301 Sobic001G098301 Sobic005G188600--Sobic001G098301 Sobic005G188600--Sobic006G160400 Sobic003G185700--Sobic005G126300 Sobic003G185700--Sobic006G160400 Sobic003G185700--Sobic010G164200 Sobic003G185700--Sobic005G188600 Sobic003G185700--Sobic003G398800 Sobic005G165500 Sobic005G165500 Sobic003G185700--Sobic005G165500 Sobic003G185700--Sobic001G158900 Sobic003G185700--Sobic001G097100 Sobic009G056700 Sobic009G056700 Sobic003G185700--Sobic009G056700 Sobic004G122200--Sobic008G183200 Sobic005G127000 Sobic005G127000 Sobic004G122200--Sobic005G127000 Sobic004G122200--Sobic010G241300 Sobic008G066100 Sobic008G066100 Sobic004G122200--Sobic008G066100 Sobic004G122200--Sobic010G164200 Sobic008G015100 Sobic008G015100 Sobic004G122200--Sobic008G015100 Sobic001G068301 Sobic001G068301 Sobic004G122200--Sobic001G068301 Sobic001G338700 Sobic001G338700 Sobic004G122200--Sobic001G338700 Sobic001G377500 Sobic001G377500 Sobic004G122200--Sobic001G377500 Sobic006G102400--Sobic010G164200 Sobic006G102400--Sobic008G183200 Sobic006G102400--Sobic004G122200 Sobic006G102400--Sobic010G241300 Sobic001G217700 Sobic001G217700 Sobic006G102400--Sobic001G217700 Sobic006G051300 Sobic006G051300 Sobic006G102400--Sobic006G051300 Sobic006G102400--Sobic006G249050 Sobic003G052300 Sobic003G052300 Sobic006G102400--Sobic003G052300 Sobic006G102400--Sobic003G397200
Octagon: transcription factors


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