Gene annotation
Transcriptome id Sobic.005G110502.1
Synonym -
Functional annotation -
UniProt A0A120GUX7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g31300.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a014202 , Zm00025a047441
Brachypodium -
Barley HORVU5Hr1G073140.1
Wheat TraesCS5A02G264800 , TraesCS5D02G272800 , TraesCS5B02G264300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
2 Sobic.009G140800 DUF647 domain containing protein, putative, expressed -
3 Sobic.004G283100 -(PubMedID : 26465154)@expressed protein -
4 Sobic.006G160400 peroxisomal biogenesis factor 11, putative, expressed -
5 Sobic.004G125700 isochorismatase family protein, putative, expressed -
6 Sobic.004G238600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@starch synthase, putative, expressed K00703: starch synthase
7 Sobic.002G098800 peroxiredoxin, putative, expressed -
8 Sobic.008G115900 mitochondrial carrier protein, putative, expressed -
9 Sobic.008G104601 - -
10 Sobic.006G130300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@4-nitrophenylphosphatase, putative, expressed K19269: PGP, phosphoglycolate phosphatase
11 Sobic.007G034300 expressed protein -
12 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
13 Sobic.006G134400 protein FAM133, putative, expressed -
14 Sobic.008G053200 fructose-bisphosphate aldolase 2(PubMedID : 26465154)@fructose-bisphosphate aldolase 2("PubMedID : 26759170,PubMedID : 24597475")@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
15 Sobic.004G144600 - -
16 Sobic.004G272100 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
17 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
18 Sobic.004G305800 expressed protein -
19 Sobic.006G244000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed K17471: sulfate transporter 3
20 Sobic.010G095000 kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase


Gene co-expression network
sample Sobic005G110502 Sobic005G110502 Sobic001G329400 Sobic001G329400 Sobic005G110502--Sobic001G329400 Sobic009G140800 Sobic009G140800 Sobic005G110502--Sobic009G140800 Sobic004G283100 Sobic004G283100 Sobic005G110502--Sobic004G283100 Sobic006G160400 Sobic006G160400 Sobic005G110502--Sobic006G160400 Sobic004G125700 Sobic004G125700 Sobic005G110502--Sobic004G125700 Sobic004G238600 Sobic004G238600 Sobic005G110502--Sobic004G238600 Sobic002G098800 Sobic002G098800 Sobic005G110502--Sobic002G098800 Sobic008G115900 Sobic008G115900 Sobic005G110502--Sobic008G115900 Sobic008G104601 Sobic008G104601 Sobic005G110502--Sobic008G104601 Sobic003G024300 Sobic003G024300 Sobic001G329400--Sobic003G024300 Sobic007G161500 Sobic007G161500 Sobic001G329400--Sobic007G161500 Sobic006G244000 Sobic006G244000 Sobic001G329400--Sobic006G244000 Sobic003G127800 Sobic003G127800 Sobic001G329400--Sobic003G127800 Sobic009G129300 Sobic009G129300 Sobic001G329400--Sobic009G129300 Sobic007G140800 Sobic007G140800 Sobic001G329400--Sobic007G140800 Sobic001G329400--Sobic004G283100 Sobic001G491000 Sobic001G491000 Sobic001G329400--Sobic001G491000 Sobic009G104800 Sobic009G104800 Sobic001G329400--Sobic009G104800 Sobic003G234200 Sobic003G234200 Sobic009G140800--Sobic003G234200 Sobic009G140800--Sobic001G329400 Sobic004G268000 Sobic004G268000 Sobic009G140800--Sobic004G268000 Sobic009G140800--Sobic004G125700 Sobic009G140800--Sobic004G238600 Sobic009G140800--Sobic005G110502 Sobic003G431900 Sobic003G431900 Sobic009G140800--Sobic003G431900 Sobic009G140800--Sobic009G129300 Sobic009G140800--Sobic007G161500 Sobic004G272100 Sobic004G272100 Sobic004G283100--Sobic004G272100 Sobic008G053200 Sobic008G053200 Sobic004G283100--Sobic008G053200 Sobic004G305800 Sobic004G305800 Sobic004G283100--Sobic004G305800 Sobic004G283100--Sobic004G238600 Sobic010G201700 Sobic010G201700 Sobic004G283100--Sobic010G201700 Sobic004G283100--Sobic001G329400 Sobic002G370600 Sobic002G370600 Sobic004G283100--Sobic002G370600 Sobic009G043000 Sobic009G043000 Sobic004G283100--Sobic009G043000 Sobic004G283100--Sobic009G129300 Sobic006G160400--Sobic004G283100 Sobic006G160400--Sobic005G110502 Sobic006G160400--Sobic001G329400 Sobic005G188600 Sobic005G188600 Sobic006G160400--Sobic005G188600 Sobic006G160400--Sobic003G024300 Sobic004G308700 Sobic004G308700 Sobic006G160400--Sobic004G308700 Sobic002G036000 Sobic002G036000 Sobic006G160400--Sobic002G036000 Sobic006G160400--Sobic008G053200 Sobic006G160400--Sobic008G115900 Sobic004G125700--Sobic009G104800 Sobic004G125700--Sobic003G024300 Sobic004G125700--Sobic007G140800 Sobic004G125700--Sobic001G329400 Sobic006G077400 Sobic006G077400 Sobic004G125700--Sobic006G077400 Sobic004G125700--Sobic010G201700 Sobic004G125700--Sobic003G431900 Sobic004G125700--Sobic006G244000 Sobic004G125700--Sobic004G272100 Sobic004G238600--Sobic008G053200 Sobic004G238600--Sobic004G283100 Sobic004G238600--Sobic004G305800 Sobic003G370000 Sobic003G370000 Sobic004G238600--Sobic003G370000 Sobic004G238600--Sobic002G370600 Sobic004G238600--Sobic007G161500 Sobic004G238600--Sobic001G329400 Sobic004G238600--Sobic004G272100 Sobic001G519800 Sobic001G519800 Sobic004G238600--Sobic001G519800 Sobic001G069000 Sobic001G069000 Sobic002G098800--Sobic001G069000 Sobic002G098800--Sobic004G308700 Sobic008G021300 Sobic008G021300 Sobic002G098800--Sobic008G021300 Sobic002G098800--Sobic004G272100 Sobic008G066100 Sobic008G066100 Sobic002G098800--Sobic008G066100 Sobic004G035500 Sobic004G035500 Sobic002G098800--Sobic004G035500 Sobic002G098800--Sobic010G201700 Sobic003G303700 Sobic003G303700 Sobic002G098800--Sobic003G303700 Sobic004G274100 Sobic004G274100 Sobic002G098800--Sobic004G274100 Sobic007G136200 Sobic007G136200 Sobic008G115900--Sobic007G136200 Sobic006G158100 Sobic006G158100 Sobic008G115900--Sobic006G158100 Sobic006G130300 Sobic006G130300 Sobic008G115900--Sobic006G130300 Sobic006G207800 Sobic006G207800 Sobic008G115900--Sobic006G207800 Sobic004G356400 Sobic004G356400 Sobic008G115900--Sobic004G356400 Sobic001G017300 Sobic001G017300 Sobic008G115900--Sobic001G017300 Sobic010G153900 Sobic010G153900 Sobic008G115900--Sobic010G153900 Sobic003G229300 Sobic003G229300 Sobic008G115900--Sobic003G229300 Sobic008G115900--Sobic001G491000 Sobic008G104601--Sobic006G244000 Sobic007G034300 Sobic007G034300 Sobic008G104601--Sobic007G034300 Sobic001G520800 Sobic001G520800 Sobic008G104601--Sobic001G520800 Sobic008G104601--Sobic001G329400 Sobic008G104601--Sobic003G431900 Sobic003G256700 Sobic003G256700 Sobic008G104601--Sobic003G256700 Sobic008G104601--Sobic004G125700 Sobic006G051300 Sobic006G051300 Sobic008G104601--Sobic006G051300 Sobic008G104601--Sobic009G104800
Octagon: transcription factors


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