Gene annotation
Transcriptome id Sobic.009G140800.1
Synonym EMB1879, Sb09g020620, RUS6
Functional annotation DUF647 domain containing protein, putative, expressed
UniProt A0A1Z5R3J6
Pfam PF04884
Panther DB PTHR12770 PTHR12770:SF25
NCBI CDD KOG4249; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G49820 : Protein of unknown function, DUF647
RAP-DB (Rice) LOC_Os05g34650.1 : DUF647 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a043726 , Zm00025a037392
Brachypodium KQK10952 , KQK06209 , KQK06205 , KQK06207 , KQK06206
Barley HORVU1Hr1G064240.3 , HORVU1Hr1G064240.2 , HORVU1Hr1G064240.1 , HORVU1Hr1G064240.7 , HORVU1Hr1G064240.6 , HORVU1Hr1G064240.5 , HORVU1Hr1G064240.4 , HORVU1Hr1G064240.9 , HORVU1Hr1G064240.8 , HORVU3Hr1G090580.8 , HORVU1Hr1G064240.10 , HORVU3Hr1G090580.9 , HORVU3Hr1G090580.5 , HORVU3Hr1G090580.4 , HORVU3Hr1G090580.7 , HORVU3Hr1G090580.6 , HORVU3Hr1G090580.1 , HORVU3Hr1G090580.3 , HORVU3Hr1G090580.2 , HORVU3Hr1G090580.11 , HORVU3Hr1G090580.10 , HORVU3Hr1G090580.13 , HORVU3Hr1G090580.14 , HORVU3Hr1G090580.12
Wheat TraesCS1A02G262300 , TraesCS3A02G403900 , TraesCS3B02G437400 , TraesCS1B02G272900 , TraesCS1B02G272900 , TraesCS1B02G272900 , TraesCS1D02G262300 , TraesCS1D02G262300 , TraesCS3D02G399100
Populus -


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cDNA sequences
Sobic.009G140800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
2 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
3 Sobic.004G268000 -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
4 Sobic.004G125700 isochorismatase family protein, putative, expressed -
5 Sobic.004G238600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@starch synthase, putative, expressed K00703: starch synthase
6 Sobic.005G110502 - -
7 Sobic.003G431900 -(PubMedID : 26976818)@expressed protein K07562: nonsense-mediated mRNA decay protein 3
8 Sobic.009G129300 heat shock protein DnaJ, putative, expressed -
9 Sobic.007G161500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PGR5, putative, expressed -
10 Sobic.006G008700 bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed K13811: 3'-phosphoadenosine 5'-phosphosulfate synthase
11 Sobic.001G020100 expressed protein -
12 Sobic.006G244000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed K17471: sulfate transporter 3
13 Sobic.004G305800 expressed protein -
14 Sobic.003G127800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.001G178250 - -
16 Sobic.005G056400 Fructose-bisphosphate aldolase(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Fructose-bisphosphate aldolase, putative (Os)"(PubMedID : 27208977)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
17 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
18 Sobic.008G053200 fructose-bisphosphate aldolase 2(PubMedID : 26465154)@fructose-bisphosphate aldolase 2("PubMedID : 26759170,PubMedID : 24597475")@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
19 Sobic.009G063100 Mitochondrial substrate carrier family protein(PubMedID : 26465154)@mitochondrial carrier protein, putative, expressed -
20 Sobic.001G134100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-AMP-activated protein kinase-related, putative, expressed -


Gene co-expression network
sample Sobic009G140800 Sobic009G140800 Sobic003G234200 Sobic003G234200 Sobic009G140800--Sobic003G234200 Sobic001G329400 Sobic001G329400 Sobic009G140800--Sobic001G329400 Sobic004G268000 Sobic004G268000 Sobic009G140800--Sobic004G268000 Sobic004G125700 Sobic004G125700 Sobic009G140800--Sobic004G125700 Sobic004G238600 Sobic004G238600 Sobic009G140800--Sobic004G238600 Sobic005G110502 Sobic005G110502 Sobic009G140800--Sobic005G110502 Sobic003G431900 Sobic003G431900 Sobic009G140800--Sobic003G431900 Sobic009G129300 Sobic009G129300 Sobic009G140800--Sobic009G129300 Sobic007G161500 Sobic007G161500 Sobic009G140800--Sobic007G161500 Sobic003G234200--Sobic003G431900 Sobic008G053200 Sobic008G053200 Sobic003G234200--Sobic008G053200 Sobic002G324500 Sobic002G324500 Sobic003G234200--Sobic002G324500 Sobic003G234200--Sobic001G329400 Sobic005G165500 Sobic005G165500 Sobic003G234200--Sobic005G165500 Sobic003G367500 Sobic003G367500 Sobic003G234200--Sobic003G367500 Sobic006G244000 Sobic006G244000 Sobic003G234200--Sobic006G244000 Sobic001G519800 Sobic001G519800 Sobic003G234200--Sobic001G519800 Sobic003G234200--Sobic009G129300 Sobic003G024300 Sobic003G024300 Sobic001G329400--Sobic003G024300 Sobic001G329400--Sobic007G161500 Sobic001G329400--Sobic006G244000 Sobic003G127800 Sobic003G127800 Sobic001G329400--Sobic003G127800 Sobic001G329400--Sobic009G129300 Sobic007G140800 Sobic007G140800 Sobic001G329400--Sobic007G140800 Sobic004G283100 Sobic004G283100 Sobic001G329400--Sobic004G283100 Sobic001G491000 Sobic001G491000 Sobic001G329400--Sobic001G491000 Sobic009G104800 Sobic009G104800 Sobic001G329400--Sobic009G104800 Sobic004G305800 Sobic004G305800 Sobic004G268000--Sobic004G305800 Sobic004G268000--Sobic009G129300 Sobic004G268000--Sobic001G491000 Sobic002G275300 Sobic002G275300 Sobic004G268000--Sobic002G275300 Sobic010G201700 Sobic010G201700 Sobic004G268000--Sobic010G201700 Sobic001G020100 Sobic001G020100 Sobic004G268000--Sobic001G020100 Sobic006G238200 Sobic006G238200 Sobic004G268000--Sobic006G238200 Sobic002G370600 Sobic002G370600 Sobic004G268000--Sobic002G370600 Sobic010G181300 Sobic010G181300 Sobic004G268000--Sobic010G181300 Sobic004G125700--Sobic009G104800 Sobic004G125700--Sobic003G024300 Sobic004G125700--Sobic007G140800 Sobic004G125700--Sobic001G329400 Sobic006G077400 Sobic006G077400 Sobic004G125700--Sobic006G077400 Sobic004G125700--Sobic010G201700 Sobic004G125700--Sobic003G431900 Sobic004G125700--Sobic006G244000 Sobic004G272100 Sobic004G272100 Sobic004G125700--Sobic004G272100 Sobic004G238600--Sobic008G053200 Sobic004G238600--Sobic004G283100 Sobic004G238600--Sobic004G305800 Sobic003G370000 Sobic003G370000 Sobic004G238600--Sobic003G370000 Sobic004G238600--Sobic002G370600 Sobic004G238600--Sobic007G161500 Sobic004G238600--Sobic001G329400 Sobic004G238600--Sobic004G272100 Sobic004G238600--Sobic001G519800 Sobic005G110502--Sobic001G329400 Sobic005G110502--Sobic009G140800 Sobic005G110502--Sobic004G283100 Sobic006G160400 Sobic006G160400 Sobic005G110502--Sobic006G160400 Sobic005G110502--Sobic004G125700 Sobic005G110502--Sobic004G238600 Sobic002G098800 Sobic002G098800 Sobic005G110502--Sobic002G098800 Sobic008G115900 Sobic008G115900 Sobic005G110502--Sobic008G115900 Sobic008G104601 Sobic008G104601 Sobic005G110502--Sobic008G104601 Sobic003G431900--Sobic008G053200 Sobic003G431900--Sobic003G234200 Sobic003G431900--Sobic004G305800 Sobic003G256700 Sobic003G256700 Sobic003G431900--Sobic003G256700 Sobic003G431900--Sobic001G519800 Sobic003G431900--Sobic005G165500 Sobic003G431900--Sobic002G324500 Sobic004G308700 Sobic004G308700 Sobic003G431900--Sobic004G308700 Sobic003G431900--Sobic004G272100 Sobic009G129300--Sobic001G491000 Sobic009G129300--Sobic010G181300 Sobic003G398800 Sobic003G398800 Sobic009G129300--Sobic003G398800 Sobic009G129300--Sobic003G127800 Sobic009G129300--Sobic004G305800 Sobic009G129300--Sobic006G238200 Sobic009G129300--Sobic002G275300 Sobic009G129300--Sobic004G268000 Sobic009G129300--Sobic007G161500 Sobic005G056400 Sobic005G056400 Sobic007G161500--Sobic005G056400 Sobic007G161500--Sobic003G127800 Sobic010G188300 Sobic010G188300 Sobic007G161500--Sobic010G188300 Sobic007G161500--Sobic001G329400 Sobic007G161500--Sobic003G370000 Sobic007G161500--Sobic001G491000 Sobic001G289500 Sobic001G289500 Sobic007G161500--Sobic001G289500 Sobic007G161500--Sobic004G305800 Sobic007G161500--Sobic003G024300
Octagon: transcription factors


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