Gene annotation
Transcriptome id Sobic.009G063100.3,Sobic.009G063100.1,Sobic.009G063100.2
Synonym SHS1, Sb09g005250, EMB104, EMB42, ATBT1
Functional annotation Mitochondrial substrate carrier family protein (PubMedID : 26465154)
mitochondrial carrier protein, putative, expressed
UniProt C5Z150
Pfam PF00153
Panther DB PTHR24089 PTHR24089:SF182
NCBI CDD KOG0752; Mitochondrial solute carrier protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32400 : Mitochondrial substrate carrier family protein
RAP-DB (Rice) LOC_Os05g07900.1,LOC_Os05g07900.2 : mitochondrial carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a036854 , Zm00025a043051
Brachypodium KQK07274
Barley -
Wheat TraesCS1A02G115500 , TraesCS1B02G135400 , TraesCS1D02G116900
Populus -


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cDNA sequences
Sobic.009G063100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G023700 Transketolase(PubMedID : 26186930)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
2 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
3 Sobic.001G129000 DnaK family protein, putative, expressed -
4 Sobic.010G188600 stromal membrane-associated protein, putative, expressed K12486: stromal membrane-associated protein
5 Sobic.004G274100 expressed protein -
6 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -
7 Sobic.007G029700 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
8 Sobic.001G102800 expressed protein -
9 Sobic.009G237100 -(PubMedID : 26976818)@bile acid sodium symporter, putative, expressed K14347: SLC10A7, solute carrier family 10 (sodium/bile acid cotransporter), member 7
10 Sobic.004G125700 isochorismatase family protein, putative, expressed -
11 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -
12 Sobic.009G140800 DUF647 domain containing protein, putative, expressed -
13 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
14 Sobic.007G009200 adenosine monophosphate kinase(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase, putative, expressed K00939: adk, adenylate kinase
15 Sobic.001G020100 expressed protein -
16 Sobic.006G120500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl transferase family 17 protein, putative, expressed K00737: beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
17 Sobic.005G100600 bZIP transcription factor domain containing protein, expressed -
18 Sobic.004G016400 CDP-alcohol phosphatidyltransferase, putative, expressed K00993: ethanolaminephosphotransferase
19 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
20 Sobic.008G188600 glyoxalase family protein, putative, expressed -


Gene co-expression network
sample Sobic009G063100 Sobic009G063100 Sobic010G023700 Sobic010G023700 Sobic009G063100--Sobic010G023700 Sobic007G140800 Sobic007G140800 Sobic009G063100--Sobic007G140800 Sobic001G129000 Sobic001G129000 Sobic009G063100--Sobic001G129000 Sobic010G188600 Sobic010G188600 Sobic009G063100--Sobic010G188600 Sobic004G274100 Sobic004G274100 Sobic009G063100--Sobic004G274100 Sobic006G207800 Sobic006G207800 Sobic009G063100--Sobic006G207800 Sobic007G029700 Sobic007G029700 Sobic009G063100--Sobic007G029700 Sobic001G102800 Sobic001G102800 Sobic009G063100--Sobic001G102800 Sobic009G237100 Sobic009G237100 Sobic009G063100--Sobic009G237100 Sobic002G051100 Sobic002G051100 Sobic010G023700--Sobic002G051100 Sobic010G023700--Sobic009G063100 Sobic010G023700--Sobic001G129000 Sobic004G272100 Sobic004G272100 Sobic010G023700--Sobic004G272100 Sobic004G125700 Sobic004G125700 Sobic010G023700--Sobic004G125700 Sobic010G023700--Sobic001G102800 Sobic010G023700--Sobic007G140800 Sobic002G277100 Sobic002G277100 Sobic010G023700--Sobic002G277100 Sobic001G020100 Sobic001G020100 Sobic010G023700--Sobic001G020100 Sobic006G077400 Sobic006G077400 Sobic007G140800--Sobic006G077400 Sobic003G303700 Sobic003G303700 Sobic007G140800--Sobic003G303700 Sobic010G201700 Sobic010G201700 Sobic007G140800--Sobic010G201700 Sobic003G024300 Sobic003G024300 Sobic007G140800--Sobic003G024300 Sobic010G153900 Sobic010G153900 Sobic007G140800--Sobic010G153900 Sobic001G329400 Sobic001G329400 Sobic007G140800--Sobic001G329400 Sobic007G009200 Sobic007G009200 Sobic007G140800--Sobic007G009200 Sobic007G140800--Sobic004G125700 Sobic007G140800--Sobic009G237100 Sobic002G036000 Sobic002G036000 Sobic001G129000--Sobic002G036000 Sobic001G129000--Sobic007G140800 Sobic001G129000--Sobic001G102800 Sobic001G129000--Sobic007G009200 Sobic001G129000--Sobic006G207800 Sobic001G129000--Sobic001G329400 Sobic001G129000--Sobic003G024300 Sobic009G113800 Sobic009G113800 Sobic001G129000--Sobic009G113800 Sobic001G129000--Sobic006G077400 Sobic010G188600--Sobic009G063100 Sobic010G188600--Sobic007G029700 Sobic002G193800 Sobic002G193800 Sobic010G188600--Sobic002G193800 Sobic004G193700 Sobic004G193700 Sobic010G188600--Sobic004G193700 Sobic002G091600 Sobic002G091600 Sobic010G188600--Sobic002G091600 Sobic006G092000 Sobic006G092000 Sobic010G188600--Sobic006G092000 Sobic005G149400 Sobic005G149400 Sobic010G188600--Sobic005G149400 Sobic008G115900 Sobic008G115900 Sobic010G188600--Sobic008G115900 Sobic001G168250 Sobic001G168250 Sobic010G188600--Sobic001G168250 Sobic004G274100--Sobic007G140800 Sobic004G274100--Sobic003G303700 Sobic002G098800 Sobic002G098800 Sobic004G274100--Sobic002G098800 Sobic004G274100--Sobic009G113800 Sobic004G274100--Sobic001G102800 Sobic008G021300 Sobic008G021300 Sobic004G274100--Sobic008G021300 Sobic004G274100--Sobic010G201700 Sobic001G069000 Sobic001G069000 Sobic004G274100--Sobic001G069000 Sobic008G188600 Sobic008G188600 Sobic004G274100--Sobic008G188600 Sobic006G207800--Sobic001G102800 Sobic006G207800--Sobic009G237100 Sobic006G207800--Sobic007G009200 Sobic003G387100 Sobic003G387100 Sobic006G207800--Sobic003G387100 Sobic009G043000 Sobic009G043000 Sobic006G207800--Sobic009G043000 Sobic010G035400 Sobic010G035400 Sobic006G207800--Sobic010G035400 Sobic003G431700 Sobic003G431700 Sobic006G207800--Sobic003G431700 Sobic006G207800--Sobic010G201700 Sobic006G238200 Sobic006G238200 Sobic006G207800--Sobic006G238200 Sobic008G001900 Sobic008G001900 Sobic007G029700--Sobic008G001900 Sobic001G064000 Sobic001G064000 Sobic007G029700--Sobic001G064000 Sobic006G128300 Sobic006G128300 Sobic007G029700--Sobic006G128300 Sobic001G043800 Sobic001G043800 Sobic007G029700--Sobic001G043800 Sobic006G038500 Sobic006G038500 Sobic007G029700--Sobic006G038500 Sobic002G218500 Sobic002G218500 Sobic007G029700--Sobic002G218500 Sobic009G129100 Sobic009G129100 Sobic007G029700--Sobic009G129100 Sobic004G016400 Sobic004G016400 Sobic007G029700--Sobic004G016400 Sobic007G029700--Sobic009G063100 Sobic001G102800--Sobic006G207800 Sobic001G519800 Sobic001G519800 Sobic001G102800--Sobic001G519800 Sobic003G002300 Sobic003G002300 Sobic001G102800--Sobic003G002300 Sobic001G102800--Sobic010G201700 Sobic001G102800--Sobic009G043000 Sobic001G102800--Sobic004G272100 Sobic001G102800--Sobic007G009200 Sobic007G052400 Sobic007G052400 Sobic001G102800--Sobic007G052400 Sobic001G102800--Sobic003G431700 Sobic009G237100--Sobic007G009200 Sobic009G237100--Sobic006G207800 Sobic009G237100--Sobic006G238200 Sobic001G100000 Sobic001G100000 Sobic009G237100--Sobic001G100000 Sobic001G491000 Sobic001G491000 Sobic009G237100--Sobic001G491000 Sobic002G275300 Sobic002G275300 Sobic009G237100--Sobic002G275300 Sobic009G237100--Sobic010G035400 Sobic009G237100--Sobic001G102800 Sobic010G181300 Sobic010G181300 Sobic009G237100--Sobic010G181300
Octagon: transcription factors


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