Gene annotation
Transcriptome id Sobic.007G029700.1
Synonym Sb07g002590
Functional annotation BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
UniProt Q8W0R6
Pfam PF00651 PF03000
Panther DB PTHR32370 PTHR32370:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G30440 : Phototropic-responsive NPH3 family protein
RAP-DB (Rice) LOC_Os08g03650.1 : BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
MaizeGDB (Corn) Zm00025a040402 , Zm00025a001114 , Zm00025a020770
Brachypodium KQJ94960 , KQJ94959 , KQJ85800 , KQJ86118 , KQJ86117
Barley HORVU6Hr1G015480.2 , HORVU5Hr1G010370.1 , HORVU5Hr1G010370.2 , HORVU6Hr1G015480.1 , HORVU5Hr1G010370.5 , HORVU5Hr1G010370.6 , HORVU5Hr1G010370.9 , HORVU5Hr1G018480.10 , HORVU5Hr1G018480.11 , HORVU5Hr1G018480.12 , HORVU5Hr1G018480.13 , HORVU5Hr1G018480.14 , HORVU5Hr1G018480.15 , HORVU5Hr1G018480.8 , HORVU5Hr1G018480.9 , HORVU5Hr1G018480.2 , HORVU5Hr1G018480.3 , HORVU5Hr1G018480.1 , HORVU5Hr1G018480.4 , HORVU5Hr1G018480.5 , HORVU7Hr1G073650.1 , HORVU6Hr1G015480.3
Wheat TraesCS5D02G385100 , TraesCS5D02G082800 , TraesCS5A02G042600 , TraesCS7D02G306400 , TraesCS5B02G046200 , TraesCS5B02G046200 , TraesCS6B02G117400 , TraesCS5A02G070700 , TraesCSU02G114000 , TraesCS6A02G085100 , TraesCS5B02G377600 , TraesCS5B02G377600 , TraesCS7B02G209700 , TraesCS5D02G051100 , TraesCS5A02G375500 , TraesCS5A02G375500 , TraesCS5A02G375500 , TraesCS7A02G309700 , TraesCS5B02G076500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -
2 Sobic.001G064000 expressed protein -
3 Sobic.006G128300 DUF565 domain containing protein, putative, expressed -
4 Sobic.001G043800 stage II sporulation protein E, putative, expressed -
5 Sobic.006G038500 tRNA-dihydrouridine synthase, putative, expressed K05539: tRNA-dihydrouridine synthase A
6 Sobic.002G218500 lecithine cholesterol acyltransferase, putative, expressed K00679: phospholipid:diacylglycerol acyltransferase
7 Sobic.009G129100 preprotein translocase subunit secY, putative, expressed -
8 Sobic.004G016400 CDP-alcohol phosphatidyltransferase, putative, expressed K00993: ethanolaminephosphotransferase
9 Sobic.009G063100 Mitochondrial substrate carrier family protein(PubMedID : 26465154)@mitochondrial carrier protein, putative, expressed -
10 Sobic.003G443500 cyclase/dehydrase family protein, expressed -
11 Sobic.004G054400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
12 Sobic.003G108800 haloacid dehalogenase-like hydrolase family protein, putative, expressed K16054: methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1
13 Sobic.008G062400 similar to Diphosphonucleotide phosphatase 1(PubMedID : 29862293)@inositol-1-monophosphatase, putative, expressed K15422: 3'(2'), 5'-bisphosphate nucleotidase / inositol polyphosphate 1-phosphatase
14 Sobic.005G100600 bZIP transcription factor domain containing protein, expressed -
15 Sobic.010G188600 stromal membrane-associated protein, putative, expressed K12486: stromal membrane-associated protein
16 Sobic.003G137100 protoporphyrinogen oxidase, chloroplast precursor, putative, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
17 Sobic.006G031800 - -
18 Sobic.004G294700 F-box family protein, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
19 Sobic.009G085500 hydrolase, alpha/beta fold family protein, putative, expressed -
20 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2


Gene co-expression network
sample Sobic007G029700 Sobic007G029700 Sobic008G001900 Sobic008G001900 Sobic007G029700--Sobic008G001900 Sobic001G064000 Sobic001G064000 Sobic007G029700--Sobic001G064000 Sobic006G128300 Sobic006G128300 Sobic007G029700--Sobic006G128300 Sobic001G043800 Sobic001G043800 Sobic007G029700--Sobic001G043800 Sobic006G038500 Sobic006G038500 Sobic007G029700--Sobic006G038500 Sobic002G218500 Sobic002G218500 Sobic007G029700--Sobic002G218500 Sobic009G129100 Sobic009G129100 Sobic007G029700--Sobic009G129100 Sobic004G016400 Sobic004G016400 Sobic007G029700--Sobic004G016400 Sobic009G063100 Sobic009G063100 Sobic007G029700--Sobic009G063100 Sobic005G001700 Sobic005G001700 Sobic008G001900--Sobic005G001700 Sobic001G073900 Sobic001G073900 Sobic008G001900--Sobic001G073900 Sobic004G235600 Sobic004G235600 Sobic008G001900--Sobic004G235600 Sobic003G085100 Sobic003G085100 Sobic008G001900--Sobic003G085100 Sobic003G332700 Sobic003G332700 Sobic008G001900--Sobic003G332700 Sobic004G054400 Sobic004G054400 Sobic008G001900--Sobic004G054400 Sobic005G063000 Sobic005G063000 Sobic008G001900--Sobic005G063000 Sobic005G204200 Sobic005G204200 Sobic008G001900--Sobic005G204200 Sobic001G465700 Sobic001G465700 Sobic008G001900--Sobic001G465700 Sobic001G064000--Sobic007G029700 Sobic010G145800 Sobic010G145800 Sobic001G064000--Sobic010G145800 Sobic007G203200 Sobic007G203200 Sobic001G064000--Sobic007G203200 Sobic010G237900 Sobic010G237900 Sobic001G064000--Sobic010G237900 Sobic007G136800 Sobic007G136800 Sobic001G064000--Sobic007G136800 Sobic006G130800 Sobic006G130800 Sobic001G064000--Sobic006G130800 Sobic001G064000--Sobic001G043800 Sobic007G095500 Sobic007G095500 Sobic001G064000--Sobic007G095500 Sobic001G250700 Sobic001G250700 Sobic001G064000--Sobic001G250700 Sobic006G128300--Sobic002G218500 Sobic004G079800 Sobic004G079800 Sobic006G128300--Sobic004G079800 Sobic006G128300--Sobic006G038500 Sobic002G431300 Sobic002G431300 Sobic006G128300--Sobic002G431300 Sobic002G347600 Sobic002G347600 Sobic006G128300--Sobic002G347600 Sobic002G042500 Sobic002G042500 Sobic006G128300--Sobic002G042500 Sobic006G128300--Sobic008G001900 Sobic001G126300 Sobic001G126300 Sobic006G128300--Sobic001G126300 Sobic006G031800 Sobic006G031800 Sobic006G128300--Sobic006G031800 Sobic001G043800--Sobic007G136800 Sobic001G043800--Sobic006G130800 Sobic004G086700 Sobic004G086700 Sobic001G043800--Sobic004G086700 Sobic001G043800--Sobic002G218500 Sobic001G102500 Sobic001G102500 Sobic001G043800--Sobic001G102500 Sobic001G043800--Sobic006G031800 Sobic001G043800--Sobic007G029700 Sobic001G053000 Sobic001G053000 Sobic001G043800--Sobic001G053000 Sobic001G043800--Sobic002G431300 Sobic006G038500--Sobic002G347600 Sobic006G038500--Sobic001G465700 Sobic004G120100 Sobic004G120100 Sobic006G038500--Sobic004G120100 Sobic006G038500--Sobic001G126300 Sobic003G141100 Sobic003G141100 Sobic006G038500--Sobic003G141100 Sobic006G038500--Sobic006G128300 Sobic001G516901 Sobic001G516901 Sobic006G038500--Sobic001G516901 Sobic003G232700 Sobic003G232700 Sobic006G038500--Sobic003G232700 Sobic003G160800 Sobic003G160800 Sobic006G038500--Sobic003G160800 Sobic002G218500--Sobic006G128300 Sobic002G218500--Sobic006G031800 Sobic002G218500--Sobic006G038500 Sobic002G218500--Sobic001G043800 Sobic002G218500--Sobic002G431300 Sobic002G218500--Sobic007G029700 Sobic002G218500--Sobic001G516901 Sobic002G218500--Sobic004G079800 Sobic005G084800 Sobic005G084800 Sobic002G218500--Sobic005G084800 Sobic003G168100 Sobic003G168100 Sobic009G129100--Sobic003G168100 Sobic005G167700 Sobic005G167700 Sobic009G129100--Sobic005G167700 Sobic003G067100 Sobic003G067100 Sobic009G129100--Sobic003G067100 Sobic010G126000 Sobic010G126000 Sobic009G129100--Sobic010G126000 Sobic003G234900 Sobic003G234900 Sobic009G129100--Sobic003G234900 Sobic003G120300 Sobic003G120300 Sobic009G129100--Sobic003G120300 Sobic001G275300 Sobic001G275300 Sobic009G129100--Sobic001G275300 Sobic004G185800 Sobic004G185800 Sobic009G129100--Sobic004G185800 Sobic009G132700 Sobic009G132700 Sobic009G129100--Sobic009G132700 Sobic005G149400 Sobic005G149400 Sobic004G016400--Sobic005G149400 Sobic001G025400 Sobic001G025400 Sobic004G016400--Sobic001G025400 Sobic003G387100 Sobic003G387100 Sobic004G016400--Sobic003G387100 Sobic004G307400 Sobic004G307400 Sobic004G016400--Sobic004G307400 Sobic009G030900 Sobic009G030900 Sobic004G016400--Sobic009G030900 Sobic001G309300 Sobic001G309300 Sobic004G016400--Sobic001G309300 Sobic009G059300 Sobic009G059300 Sobic004G016400--Sobic009G059300 Sobic004G336000 Sobic004G336000 Sobic004G016400--Sobic004G336000 Sobic001G291900 Sobic001G291900 Sobic004G016400--Sobic001G291900 Sobic010G023700 Sobic010G023700 Sobic009G063100--Sobic010G023700 Sobic007G140800 Sobic007G140800 Sobic009G063100--Sobic007G140800 Sobic001G129000 Sobic001G129000 Sobic009G063100--Sobic001G129000 Sobic010G188600 Sobic010G188600 Sobic009G063100--Sobic010G188600 Sobic004G274100 Sobic004G274100 Sobic009G063100--Sobic004G274100 Sobic006G207800 Sobic006G207800 Sobic009G063100--Sobic006G207800 Sobic009G063100--Sobic007G029700 Sobic001G102800 Sobic001G102800 Sobic009G063100--Sobic001G102800 Sobic009G237100 Sobic009G237100 Sobic009G063100--Sobic009G237100
Octagon: transcription factors


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