Gene annotation
Transcriptome id Sobic.001G064000.3,Sobic.001G064000.4,Sobic.001G064000.1,Sobic.001G064000.2
Synonym Sb01g005820
Functional annotation expressed protein
UniProt A0A1B6QHK2 , A0A1B6QHK1 , A0A1B6QHJ5
Pfam PF07762
Panther DB PTHR33074 PTHR33074:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g07440.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G064000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G029700 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
2 Sobic.010G145800 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
3 Sobic.007G203200 RNA recognition motif containing protein, putative, expressed K13201: TIA1, nucleolysin TIA-1/TIAR
4 Sobic.010G237900 RNA recognition motif containing protein, putative, expressed -
5 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
6 Sobic.006G130800 transporter family protein, putative, expressed K08150: SLC2A13, MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
7 Sobic.001G043800 stage II sporulation protein E, putative, expressed -
8 Sobic.007G095500 expressed protein -
9 Sobic.001G250700 expressed protein -
10 Sobic.002G148750 - -
11 Sobic.009G129100 preprotein translocase subunit secY, putative, expressed -
12 Sobic.005G160400 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
13 Sobic.001G375700 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
14 Sobic.004G294700 F-box family protein, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
15 Sobic.004G004900 prenyltransferase, putative, expressed K14137: protein prenyltransferase alpha subunit repeat containing protein 1
16 Sobic.010G140400 poor homologous synapsis 1 protein, putative, expressed -
17 Sobic.009G132700 - -
18 Sobic.009G049300 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.001G002600 expressed protein -
20 Sobic.003G168100 BZIP protein, putative, expressed -


Gene co-expression network
sample Sobic001G064000 Sobic001G064000 Sobic007G029700 Sobic007G029700 Sobic001G064000--Sobic007G029700 Sobic010G145800 Sobic010G145800 Sobic001G064000--Sobic010G145800 Sobic007G203200 Sobic007G203200 Sobic001G064000--Sobic007G203200 Sobic010G237900 Sobic010G237900 Sobic001G064000--Sobic010G237900 Sobic007G136800 Sobic007G136800 Sobic001G064000--Sobic007G136800 Sobic006G130800 Sobic006G130800 Sobic001G064000--Sobic006G130800 Sobic001G043800 Sobic001G043800 Sobic001G064000--Sobic001G043800 Sobic007G095500 Sobic007G095500 Sobic001G064000--Sobic007G095500 Sobic001G250700 Sobic001G250700 Sobic001G064000--Sobic001G250700 Sobic008G001900 Sobic008G001900 Sobic007G029700--Sobic008G001900 Sobic007G029700--Sobic001G064000 Sobic006G128300 Sobic006G128300 Sobic007G029700--Sobic006G128300 Sobic007G029700--Sobic001G043800 Sobic006G038500 Sobic006G038500 Sobic007G029700--Sobic006G038500 Sobic002G218500 Sobic002G218500 Sobic007G029700--Sobic002G218500 Sobic009G129100 Sobic009G129100 Sobic007G029700--Sobic009G129100 Sobic004G016400 Sobic004G016400 Sobic007G029700--Sobic004G016400 Sobic009G063100 Sobic009G063100 Sobic007G029700--Sobic009G063100 Sobic010G145800--Sobic007G203200 Sobic010G140400 Sobic010G140400 Sobic010G145800--Sobic010G140400 Sobic001G002600 Sobic001G002600 Sobic010G145800--Sobic001G002600 Sobic001G227200 Sobic001G227200 Sobic010G145800--Sobic001G227200 Sobic009G260500 Sobic009G260500 Sobic010G145800--Sobic009G260500 Sobic007G011600 Sobic007G011600 Sobic010G145800--Sobic007G011600 Sobic001G083400 Sobic001G083400 Sobic010G145800--Sobic001G083400 Sobic010G145800--Sobic010G237900 Sobic001G219600 Sobic001G219600 Sobic010G145800--Sobic001G219600 Sobic007G203200--Sobic010G145800 Sobic009G050900 Sobic009G050900 Sobic007G203200--Sobic009G050900 Sobic001G407200 Sobic001G407200 Sobic007G203200--Sobic001G407200 Sobic001G281600 Sobic001G281600 Sobic007G203200--Sobic001G281600 Sobic007G203200--Sobic010G140400 Sobic010G279700 Sobic010G279700 Sobic007G203200--Sobic010G279700 Sobic005G106500 Sobic005G106500 Sobic007G203200--Sobic005G106500 Sobic003G401100 Sobic003G401100 Sobic007G203200--Sobic003G401100 Sobic006G118700 Sobic006G118700 Sobic007G203200--Sobic006G118700 Sobic004G129300 Sobic004G129300 Sobic010G237900--Sobic004G129300 Sobic007G191700 Sobic007G191700 Sobic010G237900--Sobic007G191700 Sobic010G237900--Sobic001G002600 Sobic007G084100 Sobic007G084100 Sobic010G237900--Sobic007G084100 Sobic002G425500 Sobic002G425500 Sobic010G237900--Sobic002G425500 Sobic006G014100 Sobic006G014100 Sobic010G237900--Sobic006G014100 Sobic003G121300 Sobic003G121300 Sobic010G237900--Sobic003G121300 Sobic004G156800 Sobic004G156800 Sobic010G237900--Sobic004G156800 Sobic010G237900--Sobic010G145800 Sobic003G398700 Sobic003G398700 Sobic007G136800--Sobic003G398700 Sobic010G126000 Sobic010G126000 Sobic007G136800--Sobic010G126000 Sobic003G168100 Sobic003G168100 Sobic007G136800--Sobic003G168100 Sobic001G375700 Sobic001G375700 Sobic007G136800--Sobic001G375700 Sobic006G031800 Sobic006G031800 Sobic007G136800--Sobic006G031800 Sobic005G100600 Sobic005G100600 Sobic007G136800--Sobic005G100600 Sobic007G136800--Sobic001G043800 Sobic003G011300 Sobic003G011300 Sobic007G136800--Sobic003G011300 Sobic010G032900 Sobic010G032900 Sobic007G136800--Sobic010G032900 Sobic006G130800--Sobic001G043800 Sobic001G186800 Sobic001G186800 Sobic006G130800--Sobic001G186800 Sobic002G134600 Sobic002G134600 Sobic006G130800--Sobic002G134600 Sobic002G294800 Sobic002G294800 Sobic006G130800--Sobic002G294800 Sobic006G130800--Sobic001G064000 Sobic001G048100 Sobic001G048100 Sobic006G130800--Sobic001G048100 Sobic002G122600 Sobic002G122600 Sobic006G130800--Sobic002G122600 Sobic003G290100 Sobic003G290100 Sobic006G130800--Sobic003G290100 Sobic001G339500 Sobic001G339500 Sobic006G130800--Sobic001G339500 Sobic001G043800--Sobic007G136800 Sobic001G043800--Sobic006G130800 Sobic004G086700 Sobic004G086700 Sobic001G043800--Sobic004G086700 Sobic001G043800--Sobic002G218500 Sobic001G102500 Sobic001G102500 Sobic001G043800--Sobic001G102500 Sobic001G043800--Sobic006G031800 Sobic001G043800--Sobic007G029700 Sobic001G053000 Sobic001G053000 Sobic001G043800--Sobic001G053000 Sobic002G431300 Sobic002G431300 Sobic001G043800--Sobic002G431300 Sobic008G067100 Sobic008G067100 Sobic007G095500--Sobic008G067100 Sobic004G208600 Sobic004G208600 Sobic007G095500--Sobic004G208600 Sobic004G225600 Sobic004G225600 Sobic007G095500--Sobic004G225600 Sobic001G382800 Sobic001G382800 Sobic007G095500--Sobic001G382800 Sobic002G293600 Sobic002G293600 Sobic007G095500--Sobic002G293600 Sobic002G343400 Sobic002G343400 Sobic007G095500--Sobic002G343400 Sobic008G090900 Sobic008G090900 Sobic007G095500--Sobic008G090900 Sobic001G494500 Sobic001G494500 Sobic007G095500--Sobic001G494500 Sobic006G058100 Sobic006G058100 Sobic007G095500--Sobic006G058100 Sobic001G155400 Sobic001G155400 Sobic001G250700--Sobic001G155400 Sobic001G250700--Sobic010G237900 Sobic009G228000 Sobic009G228000 Sobic001G250700--Sobic009G228000 Sobic001G250700--Sobic010G145800 Sobic001G248100 Sobic001G248100 Sobic001G250700--Sobic001G248100 Sobic009G107300 Sobic009G107300 Sobic001G250700--Sobic009G107300 Sobic008G000400 Sobic008G000400 Sobic001G250700--Sobic008G000400 Sobic010G204900 Sobic010G204900 Sobic001G250700--Sobic010G204900 Sobic006G039400 Sobic006G039400 Sobic001G250700--Sobic006G039400
Octagon: transcription factors


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