Gene annotation
Transcriptome id Sobic.003G108800.1
Synonym Sb03g009140
Functional annotation haloacid dehalogenase-like hydrolase family protein, putative, expressed
UniProt A0A1W0VWR5
Pfam PF13419
Panther DB PTHR20371 PTHR20371:SF1
NCBI CDD KOG2630; Enolase-phosphatase E-1
KEGG Orthology K16054; methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53850 : haloacid dehalogenase-like hydrolase family protein
RAP-DB (Rice) LOC_Os11g29370.1 : haloacid dehalogenase-like hydrolase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a023873
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G029700 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
2 Sobic.008G091400 nucleoside diphosphate kinase, putative, expressed -
3 Sobic.002G347600 pentatricopeptide containing protein, putative, expressed -
4 Sobic.004G125700 isochorismatase family protein, putative, expressed -
5 Sobic.006G038500 tRNA-dihydrouridine synthase, putative, expressed K05539: tRNA-dihydrouridine synthase A
6 Sobic.006G128300 DUF565 domain containing protein, putative, expressed -
7 Sobic.003G137100 protoporphyrinogen oxidase, chloroplast precursor, putative, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
8 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -
9 Sobic.001G536800 peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
10 Sobic.006G031800 - -
11 Sobic.001G069000 ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
12 Sobic.002G218500 lecithine cholesterol acyltransferase, putative, expressed K00679: phospholipid:diacylglycerol acyltransferase
13 Sobic.009G085500 hydrolase, alpha/beta fold family protein, putative, expressed -
14 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
15 Sobic.005G110502 - -
16 Sobic.003G131600 major facilitator superfamily antiporter, putative, expressed -
17 Sobic.009G125400 FZL, putative, expressed -
18 Sobic.003G120300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
19 Sobic.010G023700 Transketolase(PubMedID : 26186930)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
20 Sobic.002G098800 peroxiredoxin, putative, expressed -


Gene co-expression network
sample Sobic003G108800 Sobic003G108800 Sobic007G029700 Sobic007G029700 Sobic003G108800--Sobic007G029700 Sobic008G091400 Sobic008G091400 Sobic003G108800--Sobic008G091400 Sobic002G347600 Sobic002G347600 Sobic003G108800--Sobic002G347600 Sobic004G125700 Sobic004G125700 Sobic003G108800--Sobic004G125700 Sobic006G038500 Sobic006G038500 Sobic003G108800--Sobic006G038500 Sobic006G128300 Sobic006G128300 Sobic003G108800--Sobic006G128300 Sobic003G137100 Sobic003G137100 Sobic003G108800--Sobic003G137100 Sobic008G001900 Sobic008G001900 Sobic003G108800--Sobic008G001900 Sobic001G536800 Sobic001G536800 Sobic003G108800--Sobic001G536800 Sobic007G029700--Sobic008G001900 Sobic001G064000 Sobic001G064000 Sobic007G029700--Sobic001G064000 Sobic007G029700--Sobic006G128300 Sobic001G043800 Sobic001G043800 Sobic007G029700--Sobic001G043800 Sobic007G029700--Sobic006G038500 Sobic002G218500 Sobic002G218500 Sobic007G029700--Sobic002G218500 Sobic009G129100 Sobic009G129100 Sobic007G029700--Sobic009G129100 Sobic004G016400 Sobic004G016400 Sobic007G029700--Sobic004G016400 Sobic009G063100 Sobic009G063100 Sobic007G029700--Sobic009G063100 Sobic008G091400--Sobic002G347600 Sobic010G035400 Sobic010G035400 Sobic008G091400--Sobic010G035400 Sobic007G136200 Sobic007G136200 Sobic008G091400--Sobic007G136200 Sobic002G220900 Sobic002G220900 Sobic008G091400--Sobic002G220900 SobicK031800 SobicK031800 Sobic008G091400--SobicK031800 Sobic004G337400 Sobic004G337400 Sobic008G091400--Sobic004G337400 Sobic006G077400 Sobic006G077400 Sobic008G091400--Sobic006G077400 Sobic007G225500 Sobic007G225500 Sobic008G091400--Sobic007G225500 Sobic005G073200 Sobic005G073200 Sobic008G091400--Sobic005G073200 Sobic002G347600--Sobic006G038500 Sobic003G301300 Sobic003G301300 Sobic002G347600--Sobic003G301300 Sobic004G336200 Sobic004G336200 Sobic002G347600--Sobic004G336200 Sobic002G347600--Sobic008G091400 Sobic002G347600--Sobic006G128300 Sobic003G247400 Sobic003G247400 Sobic002G347600--Sobic003G247400 Sobic003G141100 Sobic003G141100 Sobic002G347600--Sobic003G141100 Sobic004G328400 Sobic004G328400 Sobic002G347600--Sobic004G328400 Sobic009G121000 Sobic009G121000 Sobic002G347600--Sobic009G121000 Sobic009G104800 Sobic009G104800 Sobic004G125700--Sobic009G104800 Sobic003G024300 Sobic003G024300 Sobic004G125700--Sobic003G024300 Sobic007G140800 Sobic007G140800 Sobic004G125700--Sobic007G140800 Sobic001G329400 Sobic001G329400 Sobic004G125700--Sobic001G329400 Sobic004G125700--Sobic006G077400 Sobic010G201700 Sobic010G201700 Sobic004G125700--Sobic010G201700 Sobic003G431900 Sobic003G431900 Sobic004G125700--Sobic003G431900 Sobic006G244000 Sobic006G244000 Sobic004G125700--Sobic006G244000 Sobic004G272100 Sobic004G272100 Sobic004G125700--Sobic004G272100 Sobic006G038500--Sobic002G347600 Sobic001G465700 Sobic001G465700 Sobic006G038500--Sobic001G465700 Sobic004G120100 Sobic004G120100 Sobic006G038500--Sobic004G120100 Sobic001G126300 Sobic001G126300 Sobic006G038500--Sobic001G126300 Sobic006G038500--Sobic003G141100 Sobic006G038500--Sobic006G128300 Sobic001G516901 Sobic001G516901 Sobic006G038500--Sobic001G516901 Sobic003G232700 Sobic003G232700 Sobic006G038500--Sobic003G232700 Sobic003G160800 Sobic003G160800 Sobic006G038500--Sobic003G160800 Sobic006G128300--Sobic002G218500 Sobic004G079800 Sobic004G079800 Sobic006G128300--Sobic004G079800 Sobic006G128300--Sobic006G038500 Sobic002G431300 Sobic002G431300 Sobic006G128300--Sobic002G431300 Sobic006G128300--Sobic002G347600 Sobic002G042500 Sobic002G042500 Sobic006G128300--Sobic002G042500 Sobic006G128300--Sobic008G001900 Sobic006G128300--Sobic001G126300 Sobic006G031800 Sobic006G031800 Sobic006G128300--Sobic006G031800 Sobic003G137100--Sobic001G536800 Sobic009G085500 Sobic009G085500 Sobic003G137100--Sobic009G085500 Sobic001G069000 Sobic001G069000 Sobic003G137100--Sobic001G069000 Sobic001G495300 Sobic001G495300 Sobic003G137100--Sobic001G495300 Sobic006G010900 Sobic006G010900 Sobic003G137100--Sobic006G010900 Sobic003G412900 Sobic003G412900 Sobic003G137100--Sobic003G412900 Sobic001G233400 Sobic001G233400 Sobic003G137100--Sobic001G233400 Sobic002G000700 Sobic002G000700 Sobic003G137100--Sobic002G000700 Sobic006G103400 Sobic006G103400 Sobic003G137100--Sobic006G103400 Sobic005G001700 Sobic005G001700 Sobic008G001900--Sobic005G001700 Sobic001G073900 Sobic001G073900 Sobic008G001900--Sobic001G073900 Sobic004G235600 Sobic004G235600 Sobic008G001900--Sobic004G235600 Sobic003G085100 Sobic003G085100 Sobic008G001900--Sobic003G085100 Sobic003G332700 Sobic003G332700 Sobic008G001900--Sobic003G332700 Sobic004G054400 Sobic004G054400 Sobic008G001900--Sobic004G054400 Sobic005G063000 Sobic005G063000 Sobic008G001900--Sobic005G063000 Sobic005G204200 Sobic005G204200 Sobic008G001900--Sobic005G204200 Sobic008G001900--Sobic001G465700 Sobic001G536800--Sobic001G069000 Sobic001G536800--Sobic009G085500 Sobic001G536800--Sobic003G137100 Sobic001G536800--Sobic006G103400 Sobic002G098800 Sobic002G098800 Sobic001G536800--Sobic002G098800 Sobic009G125400 Sobic009G125400 Sobic001G536800--Sobic009G125400 Sobic008G066100 Sobic008G066100 Sobic001G536800--Sobic008G066100 Sobic004G308700 Sobic004G308700 Sobic001G536800--Sobic004G308700 Sobic001G041800 Sobic001G041800 Sobic001G536800--Sobic001G041800
Octagon: transcription factors


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