Gene annotation
Transcriptome id Sobic.003G131600.2
Synonym ZIF1
Functional annotation major facilitator superfamily antiporter, putative, expressed
UniProt A0A1W0VX51
Pfam PF00083
Panther DB PTHR23504 PTHR23504:SF21
NCBI CDD KOG2615; Permease of the major facilitator superfamily
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G43790 : zinc induced facilitator-like 2
RAP-DB (Rice) LOC_Os01g17214.1 : major facilitator superfamily antiporter, putative, expressed
MaizeGDB (Corn) Zm00025a024722 , Zm00025a035195 , Zm00025a024156 , Zm00025a005418
Brachypodium -
Barley -
Wheat TraesCS5B02G542800 , TraesCS5B02G542800 , TraesCS5D02G545000 , TraesCS5D02G545000 , TraesCS5D02G545000 , TraesCS5D02G544200 , TraesCS4A02G329200 , TraesCS5B02G542900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G077400 PAP fibrillin family domain containing protein, expressed -
2 Sobic.004G125700 isochorismatase family protein, putative, expressed -
3 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
4 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
5 Sobic.003G256700 expressed protein -
6 Sobic.001G134800 integral membrane HPP family protein, putative, expressed -
7 Sobic.002G036000 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
8 Sobic.007G009200 adenosine monophosphate kinase(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase, putative, expressed K00939: adk, adenylate kinase
9 Sobic.006G272900 peroxidase activity(PubMedID : 29491869)@glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
10 Sobic.002G249900 dehydrogenase, putative, expressed -
11 Sobic.008G021300 Unnamed(PubMedID : 24676859)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
12 Sobic.009G125400 FZL, putative, expressed -
13 Sobic.009G104800 AMP deaminase, putative, expressed K01490: AMP deaminase
14 Sobic.001G102800 expressed protein -
15 Sobic.004G308700 photosystem I light harvesting complex gene 5(PubMedID : 26465154)@chlorophyll A-B binding protein, putative, expressed K08911: light-harvesting complex I chlorophyll a/b binding protein 5
16 Sobic.003G108800 haloacid dehalogenase-like hydrolase family protein, putative, expressed K16054: methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1
17 Sobic.010G095000 kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
18 Sobic.003G431900 -(PubMedID : 26976818)@expressed protein K07562: nonsense-mediated mRNA decay protein 3
19 Sobic.002G220900 expressed protein -
20 Sobic.001G129000 DnaK family protein, putative, expressed -


Gene co-expression network
sample Sobic003G131600 Sobic003G131600 Sobic006G077400 Sobic006G077400 Sobic003G131600--Sobic006G077400 Sobic004G125700 Sobic004G125700 Sobic003G131600--Sobic004G125700 Sobic007G140800 Sobic007G140800 Sobic003G131600--Sobic007G140800 Sobic003G024300 Sobic003G024300 Sobic003G131600--Sobic003G024300 Sobic003G256700 Sobic003G256700 Sobic003G131600--Sobic003G256700 Sobic001G134800 Sobic001G134800 Sobic003G131600--Sobic001G134800 Sobic002G036000 Sobic002G036000 Sobic003G131600--Sobic002G036000 Sobic007G009200 Sobic007G009200 Sobic003G131600--Sobic007G009200 Sobic006G272900 Sobic006G272900 Sobic003G131600--Sobic006G272900 Sobic006G077400--Sobic003G024300 Sobic007G225500 Sobic007G225500 Sobic006G077400--Sobic007G225500 Sobic006G077400--Sobic007G009200 Sobic005G200200 Sobic005G200200 Sobic006G077400--Sobic005G200200 Sobic006G077400--Sobic007G140800 Sobic001G491000 Sobic001G491000 Sobic006G077400--Sobic001G491000 Sobic010G201700 Sobic010G201700 Sobic006G077400--Sobic010G201700 Sobic010G035400 Sobic010G035400 Sobic006G077400--Sobic010G035400 Sobic006G238200 Sobic006G238200 Sobic006G077400--Sobic006G238200 Sobic009G104800 Sobic009G104800 Sobic004G125700--Sobic009G104800 Sobic004G125700--Sobic003G024300 Sobic004G125700--Sobic007G140800 Sobic001G329400 Sobic001G329400 Sobic004G125700--Sobic001G329400 Sobic004G125700--Sobic006G077400 Sobic004G125700--Sobic010G201700 Sobic003G431900 Sobic003G431900 Sobic004G125700--Sobic003G431900 Sobic006G244000 Sobic006G244000 Sobic004G125700--Sobic006G244000 Sobic004G272100 Sobic004G272100 Sobic004G125700--Sobic004G272100 Sobic007G140800--Sobic006G077400 Sobic003G303700 Sobic003G303700 Sobic007G140800--Sobic003G303700 Sobic007G140800--Sobic010G201700 Sobic007G140800--Sobic003G024300 Sobic010G153900 Sobic010G153900 Sobic007G140800--Sobic010G153900 Sobic007G140800--Sobic001G329400 Sobic007G140800--Sobic007G009200 Sobic007G140800--Sobic004G125700 Sobic009G237100 Sobic009G237100 Sobic007G140800--Sobic009G237100 Sobic003G024300--Sobic007G009200 Sobic003G024300--Sobic006G077400 Sobic003G024300--Sobic001G329400 Sobic003G024300--Sobic001G491000 Sobic003G024300--Sobic009G104800 Sobic003G398800 Sobic003G398800 Sobic003G024300--Sobic003G398800 Sobic003G024300--Sobic004G125700 Sobic007G161500 Sobic007G161500 Sobic003G024300--Sobic007G161500 Sobic003G024300--Sobic010G201700 Sobic003G256700--Sobic003G431900 Sobic003G256700--Sobic006G244000 Sobic002G324500 Sobic002G324500 Sobic003G256700--Sobic002G324500 Sobic003G256700--Sobic004G125700 Sobic003G256700--Sobic009G104800 Sobic008G053200 Sobic008G053200 Sobic003G256700--Sobic008G053200 Sobic003G256700--Sobic002G036000 Sobic003G256700--Sobic001G329400 Sobic003G234200 Sobic003G234200 Sobic003G256700--Sobic003G234200 Sobic004G312800 Sobic004G312800 Sobic001G134800--Sobic004G312800 Sobic002G314400 Sobic002G314400 Sobic001G134800--Sobic002G314400 Sobic006G101500 Sobic006G101500 Sobic001G134800--Sobic006G101500 Sobic005G039700 Sobic005G039700 Sobic001G134800--Sobic005G039700 Sobic001G134800--Sobic002G036000 Sobic001G134800--Sobic003G131600 Sobic001G134700 Sobic001G134700 Sobic001G134800--Sobic001G134700 Sobic001G011700 Sobic001G011700 Sobic001G134800--Sobic001G011700 Sobic001G102800 Sobic001G102800 Sobic001G134800--Sobic001G102800 Sobic002G036000--Sobic008G053200 Sobic002G036000--Sobic001G102800 Sobic004G308700 Sobic004G308700 Sobic002G036000--Sobic004G308700 Sobic001G519800 Sobic001G519800 Sobic002G036000--Sobic001G519800 Sobic003G431700 Sobic003G431700 Sobic002G036000--Sobic003G431700 Sobic002G036000--Sobic006G101500 Sobic003G443500 Sobic003G443500 Sobic002G036000--Sobic003G443500 Sobic002G036000--Sobic004G272100 Sobic008G066100 Sobic008G066100 Sobic002G036000--Sobic008G066100 Sobic007G009200--Sobic009G237100 Sobic007G009200--Sobic003G024300 Sobic006G207800 Sobic006G207800 Sobic007G009200--Sobic006G207800 Sobic007G009200--Sobic003G398800 Sobic007G009200--Sobic006G238200 Sobic007G009200--Sobic001G102800 Sobic007G009200--Sobic006G077400 Sobic007G009200--Sobic010G201700 Sobic007G009200--Sobic010G035400 Sobic008G021300 Sobic008G021300 Sobic006G272900--Sobic008G021300 Sobic009G043000 Sobic009G043000 Sobic006G272900--Sobic009G043000 Sobic010G005500 Sobic010G005500 Sobic006G272900--Sobic010G005500 Sobic003G002300 Sobic003G002300 Sobic006G272900--Sobic003G002300 Sobic002G152700 Sobic002G152700 Sobic006G272900--Sobic002G152700 Sobic006G272900--Sobic010G201700 Sobic003G387800 Sobic003G387800 Sobic006G272900--Sobic003G387800 Sobic007G004800 Sobic007G004800 Sobic006G272900--Sobic007G004800 Sobic006G272900--Sobic001G102800
Octagon: transcription factors


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