Gene annotation
Transcriptome id Sobic.002G249900.1
Synonym Sb02g028580
Functional annotation dehydrogenase, putative, expressed
UniProt A0A1B6QDC1
Pfam PF01370
Panther DB PTHR10366 PTHR10366:SF392
NCBI CDD KOG1502; Flavonol reductase/cinnamoyl-CoA reductase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT2G33590 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os09g31490.1 : reductase, putative, expressed
MaizeGDB (Corn) Zm00025a047475
Brachypodium -
Barley HORVU4Hr1G012470.2 , HORVU5Hr1G073740.2 , HORVU5Hr1G073740.3 , HORVU5Hr1G073740.4 , HORVU5Hr1G073740.5 , HORVU7Hr1G093480.1 , HORVU4Hr1G012470.1 , HORVU7Hr1G093480.3 , HORVU7Hr1G093480.2
Wheat TraesCS7B02G052600 , TraesCS5A02G268300 , TraesCS5A02G268300 , TraesCS5B02G268300 , TraesCS5D02G276300 , TraesCS5B02G268000 , TraesCS5D02G276200 , TraesCS5B02G268000 , TraesCS5B02G268100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G387800 unknown(PubMedID : 29017446)@rhodanese-like domain containing protein, putative, expressed -
2 Sobic.001G489000 NAD(P)-linked oxidoreductase superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@putativ eribonuclease P, putative, expressed -
3 Sobic.005G194100 expressed protein -
4 Sobic.004G249800 expressed protein -
5 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.001G029100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.007G071500 photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed K03541: photosystem II 10kDa protein
8 Sobic.006G093900 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
9 Sobic.008G134800 shikimate kinase, putative, expressed -
10 Sobic.007G223500 expressed protein -
11 Sobic.009G030800 expressed protein -
12 Sobic.004G227200 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
13 Sobic.007G004800 Ferredoxin-1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
14 Sobic.004G175500 OsAPx8 - Thylakoid-bound Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
15 Sobic.004G235200 ATP synthase delta chain(PubMedID : 26186930)@-(PubMedID : 29017446)@ATP synthase F1, delta subunit family protein, putative, expressed K02113: ATPF1D, F-type H+-transporting ATPase subunit delta
16 Sobic.009G143100 cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed K02636: cytochrome b6-f complex iron-sulfur subunit
17 Sobic.010G011800 OsFBO18 - F-box and other domain containing protein, expressed -
18 Sobic.010G160700 PEPC(PubMedID : 19549309)@"C4 PTPC , photosynthetic C4 gene"(PubMedID : 2308851)@phosphoenolpyruvate carboxylase 2(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
19 Sobic.002G030500 Reticulon family protein(PubMedID : 26465154)@reticulon domain containing protein, putative, expressed -
20 Sobic.002G316700 ATP synthase subunit gamma(PubMedID : 26186930)@ATP synthase subunit gamma (Zm)(PubMedID : 27208977)@ATP synthase gamma chain, putative, expressed K02115: ATPF1G, F-type H+-transporting ATPase subunit gamma


Gene co-expression network
sample Sobic002G249900 Sobic002G249900 Sobic003G387800 Sobic003G387800 Sobic002G249900--Sobic003G387800 Sobic001G489000 Sobic001G489000 Sobic002G249900--Sobic001G489000 Sobic005G194100 Sobic005G194100 Sobic002G249900--Sobic005G194100 Sobic004G249800 Sobic004G249800 Sobic002G249900--Sobic004G249800 Sobic009G140600 Sobic009G140600 Sobic002G249900--Sobic009G140600 Sobic001G029100 Sobic001G029100 Sobic002G249900--Sobic001G029100 Sobic007G071500 Sobic007G071500 Sobic002G249900--Sobic007G071500 Sobic006G093900 Sobic006G093900 Sobic002G249900--Sobic006G093900 Sobic008G134800 Sobic008G134800 Sobic002G249900--Sobic008G134800 Sobic004G175500 Sobic004G175500 Sobic003G387800--Sobic004G175500 Sobic007G004800 Sobic007G004800 Sobic003G387800--Sobic007G004800 Sobic003G002300 Sobic003G002300 Sobic003G387800--Sobic003G002300 Sobic003G387800--Sobic009G140600 Sobic010G005500 Sobic010G005500 Sobic003G387800--Sobic010G005500 Sobic009G030900 Sobic009G030900 Sobic003G387800--Sobic009G030900 Sobic007G052400 Sobic007G052400 Sobic003G387800--Sobic007G052400 Sobic009G143100 Sobic009G143100 Sobic003G387800--Sobic009G143100 Sobic003G387800--Sobic008G134800 Sobic002G051100 Sobic002G051100 Sobic001G489000--Sobic002G051100 Sobic001G489000--Sobic009G140600 Sobic001G489000--Sobic005G194100 Sobic001G489000--Sobic003G387800 Sobic009G183700 Sobic009G183700 Sobic001G489000--Sobic009G183700 Sobic008G102000 Sobic008G102000 Sobic001G489000--Sobic008G102000 Sobic001G489000--Sobic003G002300 Sobic001G489000--Sobic008G134800 Sobic001G489000--Sobic007G004800 Sobic005G194100--Sobic009G140600 Sobic005G194100--Sobic008G102000 Sobic005G194100--Sobic009G183700 Sobic010G160700 Sobic010G160700 Sobic005G194100--Sobic010G160700 Sobic004G239100 Sobic004G239100 Sobic005G194100--Sobic004G239100 Sobic008G171300 Sobic008G171300 Sobic005G194100--Sobic008G171300 Sobic005G194100--Sobic001G489000 Sobic005G194100--Sobic003G387800 Sobic005G194100--Sobic009G030900 Sobic004G343300 Sobic004G343300 Sobic004G249800--Sobic004G343300 Sobic006G105900 Sobic006G105900 Sobic004G249800--Sobic006G105900 Sobic004G249800--Sobic007G071500 Sobic006G234100 Sobic006G234100 Sobic004G249800--Sobic006G234100 Sobic004G035500 Sobic004G035500 Sobic004G249800--Sobic004G035500 Sobic003G359100 Sobic003G359100 Sobic004G249800--Sobic003G359100 Sobic004G249800--Sobic008G134800 Sobic003G132100 Sobic003G132100 Sobic004G249800--Sobic003G132100 Sobic005G042000 Sobic005G042000 Sobic004G249800--Sobic005G042000 Sobic009G140600--Sobic003G002300 Sobic009G140600--Sobic008G102000 Sobic003G378600 Sobic003G378600 Sobic009G140600--Sobic003G378600 Sobic009G140600--Sobic003G387800 Sobic001G122300 Sobic001G122300 Sobic009G140600--Sobic001G122300 Sobic009G140600--Sobic005G194100 Sobic009G140600--Sobic007G052400 Sobic001G005200 Sobic001G005200 Sobic009G140600--Sobic001G005200 Sobic009G043000 Sobic009G043000 Sobic009G140600--Sobic009G043000 Sobic001G029100--Sobic004G175500 Sobic001G029100--Sobic009G030900 Sobic001G029100--Sobic009G143100 Sobic001G029100--Sobic003G387800 Sobic002G033800 Sobic002G033800 Sobic001G029100--Sobic002G033800 Sobic001G029100--Sobic007G004800 Sobic002G198600 Sobic002G198600 Sobic001G029100--Sobic002G198600 Sobic001G029100--Sobic006G093900 Sobic001G029100--Sobic007G071500 Sobic007G071500--Sobic009G143100 Sobic007G071500--Sobic006G105900 Sobic007G071500--Sobic004G249800 Sobic007G071500--Sobic004G343300 Sobic002G316700 Sobic002G316700 Sobic007G071500--Sobic002G316700 Sobic007G071500--Sobic008G134800 Sobic007G071500--Sobic004G035500 Sobic003G052500 Sobic003G052500 Sobic007G071500--Sobic003G052500 Sobic001G177000 Sobic001G177000 Sobic007G071500--Sobic001G177000 Sobic006G093900--Sobic007G004800 Sobic006G093900--Sobic009G140600 Sobic003G412900 Sobic003G412900 Sobic006G093900--Sobic003G412900 Sobic004G227200 Sobic004G227200 Sobic006G093900--Sobic004G227200 Sobic001G519800 Sobic001G519800 Sobic006G093900--Sobic001G519800 Sobic006G093900--Sobic009G043000 Sobic001G102800 Sobic001G102800 Sobic006G093900--Sobic001G102800 Sobic006G093900--Sobic008G102000 Sobic006G093900--Sobic003G002300 Sobic008G134800--Sobic003G359100 Sobic007G207800 Sobic007G207800 Sobic008G134800--Sobic007G207800 Sobic008G134800--Sobic007G071500 Sobic007G223500 Sobic007G223500 Sobic008G134800--Sobic007G223500 Sobic001G425400 Sobic001G425400 Sobic008G134800--Sobic001G425400 Sobic008G134800--Sobic004G035500 Sobic008G066100 Sobic008G066100 Sobic008G134800--Sobic008G066100 Sobic008G134800--Sobic009G143100 Sobic008G134800--Sobic004G249800
Octagon: transcription factors


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