Gene annotation
Transcriptome id Sobic.009G030800.1,Sobic.009G030800.3,Sobic.009G030800.2
Synonym Sb09g002570
Functional annotation expressed protein
UniProt C5YZG8 , A0A1B6P6A1 , A0A1B6P6E1
Pfam PF13225
Panther DB PTHR33591 PTHR33591:SF2 PTHR33591:SF2 PTHR33591
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G01995 : -
RAP-DB (Rice) LOC_Os05g04070.1 : expressed protein
MaizeGDB (Corn) Zm00025a055292
Brachypodium KQK07921
Barley HORVU1Hr1G015940.20 , HORVU1Hr1G015940.8 , HORVU1Hr1G015940.9 , HORVU1Hr1G015940.4 , HORVU1Hr1G015940.5 , HORVU1Hr1G015940.6 , HORVU1Hr1G015940.7 , HORVU1Hr1G015940.2 , HORVU1Hr1G015940.3 , HORVU1Hr1G015940.18 , HORVU1Hr1G015940.19 , HORVU1Hr1G015940.16 , HORVU1Hr1G015940.17 , HORVU1Hr1G015940.14 , HORVU1Hr1G015940.15 , HORVU1Hr1G015940.12 , HORVU1Hr1G015940.13 , HORVU1Hr1G015940.10 , HORVU1Hr1G015940.11
Wheat TraesCS1A02G073000 , TraesCS1B02G092300 , TraesCS1D02G075900 , TraesCS1D02G075900 , TraesCS1A02G073500 , TraesCS1B02G092200 , TraesCS1A02G073000
Populus -


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cDNA sequences
Sobic.009G030800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G283700 acyltransferase, putative, expressed K00630: glycerol-3-phosphate O-acyltransferase
2 Sobic.004G012900 expressed protein -
3 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
4 Sobic.009G140600 hydrolase, alpha/beta fold family domain containing protein, expressed -
5 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
6 Sobic.005G149400 maf, putative, expressed K06287: septum formation protein
7 Sobic.004G307400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
8 Sobic.009G175500 acetyltransferase, GNAT family, putative, expressed -
9 Sobic.001G134700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
10 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -
11 Sobic.003G435800 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain(PubMedID : 26465154)@Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chlorophyllide a oxygenase, chloroplast precursor, putative, expressed K13600: chlorophyllide a oxygenase
12 Sobic.001G005200 expressed protein -
13 Sobic.002G233700 -(PubMedID : 26976818)@dicarboxylate transporter 2(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
14 Sobic.001G122300 PAP fibrillin family domain containing protein, expressed -
15 Sobic.006G256600 expressed protein -
16 Sobic.006G132000 glycine-rich protein, putative, expressed -
17 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
18 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
19 Sobic.004G165000 -(PubMedID : 26976818)@bile acid sodium symporter, putative, expressed K14347: SLC10A7, solute carrier family 10 (sodium/bile acid cotransporter), member 7
20 Sobic.001G124800 expressed protein -


Gene co-expression network
sample Sobic009G030800 Sobic009G030800 Sobic001G283700 Sobic001G283700 Sobic009G030800--Sobic001G283700 Sobic004G012900 Sobic004G012900 Sobic009G030800--Sobic004G012900 Sobic009G059300 Sobic009G059300 Sobic009G030800--Sobic009G059300 Sobic009G140600 Sobic009G140600 Sobic009G030800--Sobic009G140600 Sobic003G387100 Sobic003G387100 Sobic009G030800--Sobic003G387100 Sobic005G149400 Sobic005G149400 Sobic009G030800--Sobic005G149400 Sobic004G307400 Sobic004G307400 Sobic009G030800--Sobic004G307400 Sobic009G175500 Sobic009G175500 Sobic009G030800--Sobic009G175500 Sobic001G134700 Sobic001G134700 Sobic009G030800--Sobic001G134700 Sobic006G106400 Sobic006G106400 Sobic001G283700--Sobic006G106400 Sobic001G283700--Sobic009G175500 Sobic001G126300 Sobic001G126300 Sobic001G283700--Sobic001G126300 Sobic004G333400 Sobic004G333400 Sobic001G283700--Sobic004G333400 Sobic001G283700--Sobic004G012900 Sobic001G128600 Sobic001G128600 Sobic001G283700--Sobic001G128600 Sobic004G165000 Sobic004G165000 Sobic001G283700--Sobic004G165000 Sobic002G112400 Sobic002G112400 Sobic001G283700--Sobic002G112400 Sobic005G110400 Sobic005G110400 Sobic001G283700--Sobic005G110400 Sobic007G052400 Sobic007G052400 Sobic004G012900--Sobic007G052400 Sobic002G233700 Sobic002G233700 Sobic004G012900--Sobic002G233700 Sobic002G401800 Sobic002G401800 Sobic004G012900--Sobic002G401800 Sobic010G005500 Sobic010G005500 Sobic004G012900--Sobic010G005500 Sobic003G378600 Sobic003G378600 Sobic004G012900--Sobic003G378600 Sobic004G012900--Sobic009G059300 Sobic010G277600 Sobic010G277600 Sobic004G012900--Sobic010G277600 Sobic004G012900--Sobic003G387100 Sobic008G171300 Sobic008G171300 Sobic004G012900--Sobic008G171300 Sobic009G059300--Sobic003G387100 Sobic009G059300--Sobic004G012900 Sobic009G059300--Sobic010G005500 Sobic006G207800 Sobic006G207800 Sobic009G059300--Sobic006G207800 Sobic009G059300--Sobic008G171300 Sobic001G309300 Sobic001G309300 Sobic009G059300--Sobic001G309300 Sobic009G059300--Sobic007G052400 Sobic009G030900 Sobic009G030900 Sobic009G059300--Sobic009G030900 Sobic008G073100 Sobic008G073100 Sobic009G059300--Sobic008G073100 Sobic003G002300 Sobic003G002300 Sobic009G140600--Sobic003G002300 Sobic008G102000 Sobic008G102000 Sobic009G140600--Sobic008G102000 Sobic009G140600--Sobic003G378600 Sobic003G387800 Sobic003G387800 Sobic009G140600--Sobic003G387800 Sobic001G122300 Sobic001G122300 Sobic009G140600--Sobic001G122300 Sobic005G194100 Sobic005G194100 Sobic009G140600--Sobic005G194100 Sobic009G140600--Sobic007G052400 Sobic001G005200 Sobic001G005200 Sobic009G140600--Sobic001G005200 Sobic009G043000 Sobic009G043000 Sobic009G140600--Sobic009G043000 Sobic003G387100--Sobic009G059300 Sobic004G336200 Sobic004G336200 Sobic003G387100--Sobic004G336200 Sobic003G387100--Sobic008G073100 Sobic003G387100--Sobic006G207800 Sobic003G160800 Sobic003G160800 Sobic003G387100--Sobic003G160800 Sobic003G387100--Sobic005G110400 Sobic003G387100--Sobic004G012900 Sobic003G412900 Sobic003G412900 Sobic003G387100--Sobic003G412900 Sobic010G035400 Sobic010G035400 Sobic003G387100--Sobic010G035400 Sobic005G149400--Sobic004G307400 Sobic004G336000 Sobic004G336000 Sobic005G149400--Sobic004G336000 Sobic004G016400 Sobic004G016400 Sobic005G149400--Sobic004G016400 SobicK031800 SobicK031800 Sobic005G149400--SobicK031800 Sobic005G149400--Sobic003G387100 Sobic005G149400--Sobic009G030800 Sobic005G149400--Sobic001G309300 Sobic005G149400--Sobic009G059300 Sobic005G149400--Sobic008G073100 Sobic004G307400--Sobic005G149400 Sobic004G343900 Sobic004G343900 Sobic004G307400--Sobic004G343900 Sobic004G307400--Sobic009G030800 Sobic004G307400--Sobic003G387100 Sobic001G291900 Sobic001G291900 Sobic004G307400--Sobic001G291900 Sobic004G307400--SobicK031800 Sobic004G307400--Sobic004G016400 Sobic004G307400--Sobic004G336000 Sobic004G307400--Sobic009G030900 Sobic009G175500--Sobic001G005200 Sobic009G175500--Sobic004G336200 Sobic009G175500--Sobic001G128600 Sobic009G175500--Sobic003G160800 Sobic009G175500--Sobic003G387100 Sobic001G500600 Sobic001G500600 Sobic009G175500--Sobic001G500600 Sobic009G175500--Sobic001G283700 Sobic009G175500--Sobic001G126300 Sobic009G175500--Sobic010G035400 Sobic001G134700--Sobic004G336200 Sobic005G100300 Sobic005G100300 Sobic001G134700--Sobic005G100300 Sobic001G134700--Sobic003G160800 Sobic008G006100 Sobic008G006100 Sobic001G134700--Sobic008G006100 Sobic006G101500 Sobic006G101500 Sobic001G134700--Sobic006G101500 Sobic001G134700--Sobic001G500600 Sobic001G134700--Sobic008G073100 Sobic001G134700--Sobic005G110400 Sobic001G134700--Sobic003G387100
Octagon: transcription factors


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