Gene annotation
Transcriptome id Sobic.004G307400.1
Synonym Sb04g034010, MAP1D
Functional annotation peptidase, M24 family protein, putative, expressed
UniProt C5XST1
Pfam PF00557
Panther DB PTHR10804 PTHR10804:SF82
NCBI CDD KOG2738; Putative methionine aminopeptidase
KEGG Orthology K01265; methionyl aminopeptidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37040 : methionine aminopeptidase 1D
RAP-DB (Rice) LOC_Os02g52420.1 : peptidase, M24 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a022204
Brachypodium KQK01776
Barley HORVU6Hr1G078770.1 , HORVU6Hr1G078770.9 , HORVU6Hr1G078770.5 , HORVU6Hr1G078770.4 , HORVU6Hr1G078770.7 , HORVU6Hr1G078770.6 , HORVU6Hr1G078770.3 , HORVU6Hr1G078770.2 , HORVU6Hr1G078770.20 , HORVU6Hr1G078770.21 , HORVU6Hr1G078770.19 , HORVU6Hr1G078770.18 , HORVU6Hr1G078770.11 , HORVU6Hr1G078770.10 , HORVU6Hr1G078770.13 , HORVU6Hr1G078770.12 , HORVU6Hr1G078770.15 , HORVU6Hr1G078770.14 , HORVU6Hr1G078770.17 , HORVU6Hr1G078770.16
Wheat TraesCS6B02G352400 , TraesCS6B02G352400 , TraesCS6D02G301300 , TraesCS6D02G301300 , TraesCS6D02G301300 , TraesCS6A02G321600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G149400 maf, putative, expressed K06287: septum formation protein
2 Sobic.004G343900 expressed protein -
3 Sobic.009G030800 expressed protein -
4 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
5 Sobic.001G291900 expressed protein -
6 Sobic.K031800 inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
7 Sobic.004G016400 CDP-alcohol phosphatidyltransferase, putative, expressed K00993: ethanolaminephosphotransferase
8 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
9 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
10 Sobic.006G256600 expressed protein -
11 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
12 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
13 Sobic.004G065300 CR084 protein, putative, expressed -
14 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
15 Sobic.003G193700 carbamoyl-phosphate synthase large chain, putative, expressed K01955: carB, carbamoyl-phosphate synthase large subunit
16 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
17 Sobic.008G188600 glyoxalase family protein, putative, expressed -
18 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
19 Sobic.005G123200 cbbY, putative, expressed -
20 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -


Gene co-expression network
sample Sobic004G307400 Sobic004G307400 Sobic005G149400 Sobic005G149400 Sobic004G307400--Sobic005G149400 Sobic004G343900 Sobic004G343900 Sobic004G307400--Sobic004G343900 Sobic009G030800 Sobic009G030800 Sobic004G307400--Sobic009G030800 Sobic003G387100 Sobic003G387100 Sobic004G307400--Sobic003G387100 Sobic001G291900 Sobic001G291900 Sobic004G307400--Sobic001G291900 SobicK031800 SobicK031800 Sobic004G307400--SobicK031800 Sobic004G016400 Sobic004G016400 Sobic004G307400--Sobic004G016400 Sobic004G336000 Sobic004G336000 Sobic004G307400--Sobic004G336000 Sobic009G030900 Sobic009G030900 Sobic004G307400--Sobic009G030900 Sobic005G149400--Sobic004G307400 Sobic005G149400--Sobic004G336000 Sobic005G149400--Sobic004G016400 Sobic005G149400--SobicK031800 Sobic005G149400--Sobic003G387100 Sobic005G149400--Sobic009G030800 Sobic001G309300 Sobic001G309300 Sobic005G149400--Sobic001G309300 Sobic009G059300 Sobic009G059300 Sobic005G149400--Sobic009G059300 Sobic008G073100 Sobic008G073100 Sobic005G149400--Sobic008G073100 Sobic004G343900--Sobic004G307400 Sobic008G171300 Sobic008G171300 Sobic004G343900--Sobic008G171300 Sobic004G343900--Sobic003G387100 Sobic008G188600 Sobic008G188600 Sobic004G343900--Sobic008G188600 Sobic004G343900--Sobic005G149400 Sobic004G343900--Sobic009G030900 Sobic004G343900--Sobic009G059300 Sobic004G274100 Sobic004G274100 Sobic004G343900--Sobic004G274100 Sobic006G067400 Sobic006G067400 Sobic004G343900--Sobic006G067400 Sobic001G283700 Sobic001G283700 Sobic009G030800--Sobic001G283700 Sobic004G012900 Sobic004G012900 Sobic009G030800--Sobic004G012900 Sobic009G030800--Sobic009G059300 Sobic009G140600 Sobic009G140600 Sobic009G030800--Sobic009G140600 Sobic009G030800--Sobic003G387100 Sobic009G030800--Sobic005G149400 Sobic009G030800--Sobic004G307400 Sobic009G175500 Sobic009G175500 Sobic009G030800--Sobic009G175500 Sobic001G134700 Sobic001G134700 Sobic009G030800--Sobic001G134700 Sobic003G387100--Sobic009G059300 Sobic004G336200 Sobic004G336200 Sobic003G387100--Sobic004G336200 Sobic003G387100--Sobic008G073100 Sobic006G207800 Sobic006G207800 Sobic003G387100--Sobic006G207800 Sobic003G160800 Sobic003G160800 Sobic003G387100--Sobic003G160800 Sobic005G110400 Sobic005G110400 Sobic003G387100--Sobic005G110400 Sobic003G387100--Sobic004G012900 Sobic003G412900 Sobic003G412900 Sobic003G387100--Sobic003G412900 Sobic010G035400 Sobic010G035400 Sobic003G387100--Sobic010G035400 Sobic001G368500 Sobic001G368500 Sobic001G291900--Sobic001G368500 Sobic001G104800 Sobic001G104800 Sobic001G291900--Sobic001G104800 Sobic003G085000 Sobic003G085000 Sobic001G291900--Sobic003G085000 Sobic001G291900--Sobic004G336000 Sobic005G002900 Sobic005G002900 Sobic001G291900--Sobic005G002900 Sobic001G291900--Sobic009G059300 Sobic001G291900--Sobic001G309300 Sobic006G055800 Sobic006G055800 Sobic001G291900--Sobic006G055800 Sobic006G106400 Sobic006G106400 Sobic001G291900--Sobic006G106400 Sobic003G219200 Sobic003G219200 SobicK031800--Sobic003G219200 SobicK031800--Sobic008G188600 SobicK031800--Sobic003G387100 SobicK031800--Sobic009G175500 SobicK031800--Sobic005G149400 SobicK031800--Sobic004G336200 SobicK031800--Sobic010G035400 Sobic002G275300 Sobic002G275300 SobicK031800--Sobic002G275300 Sobic006G102000 Sobic006G102000 SobicK031800--Sobic006G102000 Sobic004G016400--Sobic005G149400 Sobic001G025400 Sobic001G025400 Sobic004G016400--Sobic001G025400 Sobic004G016400--Sobic003G387100 Sobic004G016400--Sobic004G307400 Sobic004G016400--Sobic009G030900 Sobic004G016400--Sobic001G309300 Sobic004G016400--Sobic009G059300 Sobic004G016400--Sobic004G336000 Sobic004G016400--Sobic001G291900 Sobic004G336000--Sobic001G309300 Sobic001G495200 Sobic001G495200 Sobic004G336000--Sobic001G495200 Sobic004G336000--Sobic008G073100 Sobic004G336000--Sobic001G291900 Sobic003G432500 Sobic003G432500 Sobic004G336000--Sobic003G432500 Sobic004G336000--Sobic006G055800 Sobic004G011300 Sobic004G011300 Sobic004G336000--Sobic004G011300 Sobic004G336000--Sobic003G085000 Sobic004G336000--Sobic003G387100 Sobic010G005500 Sobic010G005500 Sobic009G030900--Sobic010G005500 Sobic010G277600 Sobic010G277600 Sobic009G030900--Sobic010G277600 Sobic007G052400 Sobic007G052400 Sobic009G030900--Sobic007G052400 Sobic009G183700 Sobic009G183700 Sobic009G030900--Sobic009G183700 Sobic003G387800 Sobic003G387800 Sobic009G030900--Sobic003G387800 Sobic009G030900--Sobic009G059300 Sobic003G002300 Sobic003G002300 Sobic009G030900--Sobic003G002300 Sobic009G030900--Sobic008G171300 Sobic004G175500 Sobic004G175500 Sobic009G030900--Sobic004G175500
Octagon: transcription factors


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