Gene annotation
Transcriptome id Sobic.004G343900.1
Synonym Sb04g037110
Functional annotation expressed protein
UniProt C5XVU2
Pfam PF13419
Panther DB PTHR19288:SF38 PTHR19288
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33255 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os02g57100.1 : expressed protein
MaizeGDB (Corn) Zm00025a032812
Brachypodium -
Barley HORVU6Hr1G090380.6 , HORVU6Hr1G090380.7 , HORVU6Hr1G090380.4 , HORVU6Hr1G090380.5 , HORVU6Hr1G090380.2 , HORVU6Hr1G090380.3 , HORVU6Hr1G090380.1 , HORVU7Hr1G041330.2
Wheat TraesCS6D02G371900 , TraesCS5A02G319600 , TraesCS5A02G319600 , TraesCS5A02G319600 , TraesCS6D02G371900 , TraesCS6A02G387600 , TraesCS6A02G387600 , TraesCS6B02G427000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G307400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
2 Sobic.008G171300 methyltransferase domain containing protein, putative, expressed K12502: VTE3, MPBQ/MSBQ methyltransferase
3 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
4 Sobic.008G188600 glyoxalase family protein, putative, expressed -
5 Sobic.005G149400 maf, putative, expressed K06287: septum formation protein
6 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
7 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
8 Sobic.004G274100 expressed protein -
9 Sobic.006G067400 Ser/Thr protein phosphatase family protein, putative, expressed -
10 Sobic.001G314200 expressed protein -
11 Sobic.006G054300 amidohydrolase family protein, expressed -
12 Sobic.K031800 inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
13 Sobic.004G016400 CDP-alcohol phosphatidyltransferase, putative, expressed K00993: ethanolaminephosphotransferase
14 Sobic.003G151500 CRS2-associated factor 2, chloroplast precursor, putative, expressed -
15 Sobic.003G022300 SOUL heme-binding protein, putative, expressed -
16 Sobic.002G299900 expressed protein -
17 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
18 Sobic.002G406700 tyrosine-specific transport protein, putative, expressed K03834: tyrosine-specific transport protein
19 Sobic.002G272100 expressed protein -
20 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase


Gene co-expression network
sample Sobic004G343900 Sobic004G343900 Sobic004G307400 Sobic004G307400 Sobic004G343900--Sobic004G307400 Sobic008G171300 Sobic008G171300 Sobic004G343900--Sobic008G171300 Sobic003G387100 Sobic003G387100 Sobic004G343900--Sobic003G387100 Sobic008G188600 Sobic008G188600 Sobic004G343900--Sobic008G188600 Sobic005G149400 Sobic005G149400 Sobic004G343900--Sobic005G149400 Sobic009G030900 Sobic009G030900 Sobic004G343900--Sobic009G030900 Sobic009G059300 Sobic009G059300 Sobic004G343900--Sobic009G059300 Sobic004G274100 Sobic004G274100 Sobic004G343900--Sobic004G274100 Sobic006G067400 Sobic006G067400 Sobic004G343900--Sobic006G067400 Sobic004G307400--Sobic005G149400 Sobic004G307400--Sobic004G343900 Sobic009G030800 Sobic009G030800 Sobic004G307400--Sobic009G030800 Sobic004G307400--Sobic003G387100 Sobic001G291900 Sobic001G291900 Sobic004G307400--Sobic001G291900 SobicK031800 SobicK031800 Sobic004G307400--SobicK031800 Sobic004G016400 Sobic004G016400 Sobic004G307400--Sobic004G016400 Sobic004G336000 Sobic004G336000 Sobic004G307400--Sobic004G336000 Sobic004G307400--Sobic009G030900 Sobic002G233700 Sobic002G233700 Sobic008G171300--Sobic002G233700 Sobic007G052400 Sobic007G052400 Sobic008G171300--Sobic007G052400 Sobic007G225500 Sobic007G225500 Sobic008G171300--Sobic007G225500 Sobic003G002300 Sobic003G002300 Sobic008G171300--Sobic003G002300 Sobic008G102000 Sobic008G102000 Sobic008G171300--Sobic008G102000 Sobic008G171300--Sobic009G059300 Sobic004G012900 Sobic004G012900 Sobic008G171300--Sobic004G012900 Sobic009G140600 Sobic009G140600 Sobic008G171300--Sobic009G140600 Sobic009G183700 Sobic009G183700 Sobic008G171300--Sobic009G183700 Sobic003G387100--Sobic009G059300 Sobic004G336200 Sobic004G336200 Sobic003G387100--Sobic004G336200 Sobic008G073100 Sobic008G073100 Sobic003G387100--Sobic008G073100 Sobic006G207800 Sobic006G207800 Sobic003G387100--Sobic006G207800 Sobic003G160800 Sobic003G160800 Sobic003G387100--Sobic003G160800 Sobic005G110400 Sobic005G110400 Sobic003G387100--Sobic005G110400 Sobic003G387100--Sobic004G012900 Sobic003G412900 Sobic003G412900 Sobic003G387100--Sobic003G412900 Sobic010G035400 Sobic010G035400 Sobic003G387100--Sobic010G035400 Sobic008G188600--Sobic003G387100 Sobic009G043000 Sobic009G043000 Sobic008G188600--Sobic009G043000 Sobic008G188600--Sobic008G102000 Sobic008G188600--Sobic006G207800 Sobic008G188600--Sobic009G059300 Sobic008G188600--Sobic006G067400 Sobic010G201700 Sobic010G201700 Sobic008G188600--Sobic010G201700 Sobic010G153900 Sobic010G153900 Sobic008G188600--Sobic010G153900 Sobic008G188600--Sobic007G225500 Sobic005G149400--Sobic004G307400 Sobic005G149400--Sobic004G336000 Sobic005G149400--Sobic004G016400 Sobic005G149400--SobicK031800 Sobic005G149400--Sobic003G387100 Sobic005G149400--Sobic009G030800 Sobic001G309300 Sobic001G309300 Sobic005G149400--Sobic001G309300 Sobic005G149400--Sobic009G059300 Sobic005G149400--Sobic008G073100 Sobic010G005500 Sobic010G005500 Sobic009G030900--Sobic010G005500 Sobic010G277600 Sobic010G277600 Sobic009G030900--Sobic010G277600 Sobic009G030900--Sobic007G052400 Sobic009G030900--Sobic009G183700 Sobic003G387800 Sobic003G387800 Sobic009G030900--Sobic003G387800 Sobic009G030900--Sobic009G059300 Sobic009G030900--Sobic003G002300 Sobic009G030900--Sobic008G171300 Sobic004G175500 Sobic004G175500 Sobic009G030900--Sobic004G175500 Sobic009G059300--Sobic003G387100 Sobic009G059300--Sobic004G012900 Sobic009G059300--Sobic010G005500 Sobic009G059300--Sobic006G207800 Sobic009G059300--Sobic008G171300 Sobic009G059300--Sobic001G309300 Sobic009G059300--Sobic007G052400 Sobic009G059300--Sobic009G030900 Sobic009G059300--Sobic008G073100 Sobic007G140800 Sobic007G140800 Sobic004G274100--Sobic007G140800 Sobic003G303700 Sobic003G303700 Sobic004G274100--Sobic003G303700 Sobic002G098800 Sobic002G098800 Sobic004G274100--Sobic002G098800 Sobic009G113800 Sobic009G113800 Sobic004G274100--Sobic009G113800 Sobic001G102800 Sobic001G102800 Sobic004G274100--Sobic001G102800 Sobic008G021300 Sobic008G021300 Sobic004G274100--Sobic008G021300 Sobic004G274100--Sobic010G201700 Sobic001G069000 Sobic001G069000 Sobic004G274100--Sobic001G069000 Sobic004G274100--Sobic008G188600 Sobic006G067400--Sobic008G188600 Sobic006G067400--Sobic008G171300 Sobic006G067400--Sobic009G059300 Sobic006G067400--Sobic009G043000 Sobic001G314200 Sobic001G314200 Sobic006G067400--Sobic001G314200 Sobic006G067400--Sobic007G052400 Sobic009G210200 Sobic009G210200 Sobic006G067400--Sobic009G210200 Sobic006G067400--Sobic009G030900 Sobic006G067400--Sobic007G225500
Octagon: transcription factors


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