Gene annotation
Transcriptome id Sobic.004G065300.1
Synonym Sb04g005460
Functional annotation CR084 protein, putative, expressed
UniProt C5XWV2
Pfam PF02575
Panther DB PTHR33449 PTHR33449:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G24020 : Uncharacterised BCR, YbaB family COG0718
RAP-DB (Rice) LOC_Os02g08380.1 : CR084 protein, putative, expressed
MaizeGDB (Corn) Zm00025a034739 , Zm00025a019220
Brachypodium PNT66028 , PNT66029 , PNT66030
Barley -
Wheat TraesCS6D02G137000 , TraesCS6B02G175800
Populus -


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cDNA sequences
Sobic.004G065300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G368500 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
2 Sobic.006G055800 mttA/Hcf106 family protein, putative, expressed -
3 Sobic.003G432500 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@signal recognition particle receptor, putative, expressed K03110: fused signal recognition particle receptor
4 Sobic.005G110400 pentatricopeptide repeat protein PPR986-12, putative, expressed -
5 Sobic.003G324700 expressed protein -
6 Sobic.006G256600 expressed protein -
7 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
8 Sobic.001G469933 - K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
9 Sobic.002G297400 tetratricopeptide repeat domain containing protein, expressed -
10 Sobic.004G336000 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
11 Sobic.009G085200 glyoxalase family protein, putative, expressed K01759: GLO1, lactoylglutathione lyase
12 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
13 Sobic.001G291900 expressed protein -
14 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
15 Sobic.003G271900 expressed protein -
16 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
17 Sobic.001G126300 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase
18 Sobic.006G106400 OsDegp5 - Putative Deg protease homologue, expressed -
19 Sobic.003G225100 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
20 Sobic.005G143500 aspartyl/glutamyl-tRNA amidotransferase subunit B, putative, expressed K02434: gatB, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B


Gene co-expression network
sample Sobic004G065300 Sobic004G065300 Sobic001G368500 Sobic001G368500 Sobic004G065300--Sobic001G368500 Sobic006G055800 Sobic006G055800 Sobic004G065300--Sobic006G055800 Sobic003G432500 Sobic003G432500 Sobic004G065300--Sobic003G432500 Sobic005G110400 Sobic005G110400 Sobic004G065300--Sobic005G110400 Sobic003G324700 Sobic003G324700 Sobic004G065300--Sobic003G324700 Sobic006G256600 Sobic006G256600 Sobic004G065300--Sobic006G256600 Sobic005G002900 Sobic005G002900 Sobic004G065300--Sobic005G002900 Sobic001G469933 Sobic001G469933 Sobic004G065300--Sobic001G469933 Sobic002G297400 Sobic002G297400 Sobic004G065300--Sobic002G297400 Sobic001G368500--Sobic003G324700 Sobic001G368500--Sobic005G110400 Sobic001G368500--Sobic003G432500 Sobic001G368500--Sobic001G469933 Sobic001G122400 Sobic001G122400 Sobic001G368500--Sobic001G122400 Sobic008G073100 Sobic008G073100 Sobic001G368500--Sobic008G073100 Sobic002G401800 Sobic002G401800 Sobic001G368500--Sobic002G401800 Sobic003G271900 Sobic003G271900 Sobic001G368500--Sobic003G271900 Sobic005G143500 Sobic005G143500 Sobic001G368500--Sobic005G143500 Sobic006G055800--Sobic003G432500 Sobic006G055800--Sobic003G324700 Sobic006G055800--Sobic005G002900 Sobic006G055800--Sobic001G469933 Sobic006G055800--Sobic001G368500 Sobic009G148500 Sobic009G148500 Sobic006G055800--Sobic009G148500 Sobic002G152800 Sobic002G152800 Sobic006G055800--Sobic002G152800 Sobic001G083100 Sobic001G083100 Sobic006G055800--Sobic001G083100 Sobic006G055800--Sobic005G110400 Sobic003G432500--Sobic001G368500 Sobic003G432500--Sobic006G055800 Sobic003G432500--Sobic001G469933 Sobic003G432500--Sobic003G271900 Sobic003G432500--Sobic005G110400 Sobic003G432500--Sobic003G324700 Sobic003G432500--Sobic008G073100 Sobic004G336000 Sobic004G336000 Sobic003G432500--Sobic004G336000 Sobic003G432500--Sobic002G152800 Sobic005G110400--Sobic008G073100 Sobic005G110400--Sobic001G368500 Sobic001G126300 Sobic001G126300 Sobic005G110400--Sobic001G126300 Sobic005G110400--Sobic002G401800 Sobic004G336200 Sobic004G336200 Sobic005G110400--Sobic004G336200 Sobic003G387100 Sobic003G387100 Sobic005G110400--Sobic003G387100 Sobic005G110400--Sobic005G143500 Sobic003G077400 Sobic003G077400 Sobic005G110400--Sobic003G077400 Sobic005G110400--Sobic003G432500 Sobic003G324700--Sobic001G122400 Sobic003G324700--Sobic001G368500 Sobic003G324700--Sobic001G469933 Sobic004G335800 Sobic004G335800 Sobic003G324700--Sobic004G335800 Sobic003G324700--Sobic006G055800 Sobic003G324700--Sobic002G152800 Sobic003G386300 Sobic003G386300 Sobic003G324700--Sobic003G386300 Sobic003G324700--Sobic003G432500 Sobic001G527100 Sobic001G527100 Sobic003G324700--Sobic001G527100 Sobic010G255100 Sobic010G255100 Sobic006G256600--Sobic010G255100 Sobic003G085000 Sobic003G085000 Sobic006G256600--Sobic003G085000 Sobic001G291900 Sobic001G291900 Sobic006G256600--Sobic001G291900 Sobic006G210400 Sobic006G210400 Sobic006G256600--Sobic006G210400 Sobic006G256600--Sobic002G297400 Sobic006G256600--Sobic006G055800 Sobic006G256600--Sobic005G002900 Sobic001G309300 Sobic001G309300 Sobic006G256600--Sobic001G309300 Sobic006G256600--Sobic004G065300 Sobic005G002900--Sobic001G083100 Sobic005G002900--Sobic006G055800 Sobic005G002900--Sobic009G148500 Sobic005G002900--Sobic001G469933 Sobic005G002900--Sobic001G291900 Sobic006G106400 Sobic006G106400 Sobic005G002900--Sobic006G106400 Sobic005G002900--Sobic003G432500 Sobic003G232700 Sobic003G232700 Sobic005G002900--Sobic003G232700 Sobic002G131700 Sobic002G131700 Sobic005G002900--Sobic002G131700 Sobic001G469933--Sobic001G122400 Sobic001G469933--Sobic001G368500 Sobic001G469933--Sobic003G324700 Sobic001G469933--Sobic003G077400 Sobic001G469933--Sobic006G055800 Sobic001G469933--Sobic003G432500 Sobic001G469933--Sobic004G335800 Sobic001G469933--Sobic001G083100 Sobic001G469933--Sobic005G110400 Sobic004G179200 Sobic004G179200 Sobic002G297400--Sobic004G179200 Sobic002G297400--Sobic006G055800 Sobic002G297400--Sobic001G469933 Sobic002G297400--Sobic006G256600 Sobic002G297400--Sobic001G122400 Sobic005G184300 Sobic005G184300 Sobic002G297400--Sobic005G184300 Sobic002G297400--Sobic003G324700 Sobic003G439000 Sobic003G439000 Sobic002G297400--Sobic003G439000 Sobic006G107600 Sobic006G107600 Sobic002G297400--Sobic006G107600
Octagon: transcription factors


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