Gene annotation
Transcriptome id Sobic.003G256700.1
Synonym Sb03g031150
Functional annotation expressed protein
UniProt C5XGP9
Pfam -
Panther DB PTHR35719 PTHR35719:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33250 : -
RAP-DB (Rice) LOC_Os01g48820.1 : expressed protein
MaizeGDB (Corn) Zm00025a028069 , Zm00025a038817
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G431900 -(PubMedID : 26976818)@expressed protein K07562: nonsense-mediated mRNA decay protein 3
2 Sobic.006G244000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed K17471: sulfate transporter 3
3 Sobic.002G324500 PPDK regulatory protein(PubMedID : 26465154)@PPDK regulatory protein(PubMedID : 26465154)@-(PubMedID : 26976818)@pyruvate orthophosphate dikinase regulatory protein(PubMedID : 27016024)@pyruvate Pi dikinase regulatory protein, putative, expressed K09773: [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase
4 Sobic.004G125700 isochorismatase family protein, putative, expressed -
5 Sobic.009G104800 AMP deaminase, putative, expressed K01490: AMP deaminase
6 Sobic.008G053200 fructose-bisphosphate aldolase 2(PubMedID : 26465154)@fructose-bisphosphate aldolase 2("PubMedID : 26759170,PubMedID : 24597475")@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
7 Sobic.002G036000 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
8 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
9 Sobic.003G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
10 Sobic.008G104601 - -
11 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
12 Sobic.001G520800 expressed protein -
13 Sobic.004G308700 photosystem I light harvesting complex gene 5(PubMedID : 26465154)@chlorophyll A-B binding protein, putative, expressed K08911: light-harvesting complex I chlorophyll a/b binding protein 5
14 Sobic.001G519800 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K05298: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating)
15 Sobic.003G367500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
16 Sobic.004G272100 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
17 Sobic.009G048900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
18 Sobic.007G009200 adenosine monophosphate kinase(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase, putative, expressed K00939: adk, adenylate kinase
19 Sobic.006G077400 PAP fibrillin family domain containing protein, expressed -
20 Sobic.005G089600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase


Gene co-expression network
sample Sobic003G256700 Sobic003G256700 Sobic003G431900 Sobic003G431900 Sobic003G256700--Sobic003G431900 Sobic006G244000 Sobic006G244000 Sobic003G256700--Sobic006G244000 Sobic002G324500 Sobic002G324500 Sobic003G256700--Sobic002G324500 Sobic004G125700 Sobic004G125700 Sobic003G256700--Sobic004G125700 Sobic009G104800 Sobic009G104800 Sobic003G256700--Sobic009G104800 Sobic008G053200 Sobic008G053200 Sobic003G256700--Sobic008G053200 Sobic002G036000 Sobic002G036000 Sobic003G256700--Sobic002G036000 Sobic001G329400 Sobic001G329400 Sobic003G256700--Sobic001G329400 Sobic003G234200 Sobic003G234200 Sobic003G256700--Sobic003G234200 Sobic003G431900--Sobic008G053200 Sobic003G431900--Sobic003G234200 Sobic004G305800 Sobic004G305800 Sobic003G431900--Sobic004G305800 Sobic003G431900--Sobic003G256700 Sobic001G519800 Sobic001G519800 Sobic003G431900--Sobic001G519800 Sobic005G165500 Sobic005G165500 Sobic003G431900--Sobic005G165500 Sobic003G431900--Sobic002G324500 Sobic004G308700 Sobic004G308700 Sobic003G431900--Sobic004G308700 Sobic004G272100 Sobic004G272100 Sobic003G431900--Sobic004G272100 Sobic006G244000--Sobic001G329400 Sobic009G048900 Sobic009G048900 Sobic006G244000--Sobic009G048900 Sobic006G244000--Sobic003G256700 Sobic006G244000--Sobic009G104800 Sobic008G104601 Sobic008G104601 Sobic006G244000--Sobic008G104601 Sobic006G244000--Sobic004G125700 Sobic006G244000--Sobic003G431900 Sobic001G406000 Sobic001G406000 Sobic006G244000--Sobic001G406000 Sobic001G134100 Sobic001G134100 Sobic006G244000--Sobic001G134100 Sobic003G367500 Sobic003G367500 Sobic002G324500--Sobic003G367500 Sobic002G324500--Sobic003G234200 Sobic008G117000 Sobic008G117000 Sobic002G324500--Sobic008G117000 Sobic002G324500--Sobic003G431900 Sobic004G215800 Sobic004G215800 Sobic002G324500--Sobic004G215800 Sobic002G324500--Sobic003G256700 Sobic007G009200 Sobic007G009200 Sobic002G324500--Sobic007G009200 Sobic003G024300 Sobic003G024300 Sobic002G324500--Sobic003G024300 Sobic005G089600 Sobic005G089600 Sobic002G324500--Sobic005G089600 Sobic004G125700--Sobic009G104800 Sobic004G125700--Sobic003G024300 Sobic007G140800 Sobic007G140800 Sobic004G125700--Sobic007G140800 Sobic004G125700--Sobic001G329400 Sobic006G077400 Sobic006G077400 Sobic004G125700--Sobic006G077400 Sobic010G201700 Sobic010G201700 Sobic004G125700--Sobic010G201700 Sobic004G125700--Sobic003G431900 Sobic004G125700--Sobic006G244000 Sobic004G125700--Sobic004G272100 Sobic009G104800--Sobic004G125700 Sobic009G104800--Sobic003G024300 Sobic009G104800--Sobic001G329400 Sobic009G104800--Sobic006G077400 Sobic009G104800--Sobic006G244000 Sobic009G104800--Sobic007G140800 Sobic009G104800--Sobic003G256700 Sobic007G161500 Sobic007G161500 Sobic009G104800--Sobic007G161500 Sobic010G095000 Sobic010G095000 Sobic009G104800--Sobic010G095000 Sobic008G053200--Sobic003G431900 Sobic008G053200--Sobic001G519800 Sobic008G053200--Sobic003G234200 Sobic008G053200--Sobic002G036000 Sobic004G238600 Sobic004G238600 Sobic008G053200--Sobic004G238600 Sobic004G283100 Sobic004G283100 Sobic008G053200--Sobic004G283100 Sobic008G053200--Sobic004G272100 Sobic008G053200--Sobic004G308700 Sobic008G053200--Sobic005G089600 Sobic002G036000--Sobic008G053200 Sobic001G102800 Sobic001G102800 Sobic002G036000--Sobic001G102800 Sobic002G036000--Sobic004G308700 Sobic002G036000--Sobic001G519800 Sobic003G431700 Sobic003G431700 Sobic002G036000--Sobic003G431700 Sobic006G101500 Sobic006G101500 Sobic002G036000--Sobic006G101500 Sobic003G443500 Sobic003G443500 Sobic002G036000--Sobic003G443500 Sobic002G036000--Sobic004G272100 Sobic008G066100 Sobic008G066100 Sobic002G036000--Sobic008G066100 Sobic001G329400--Sobic003G024300 Sobic001G329400--Sobic007G161500 Sobic001G329400--Sobic006G244000 Sobic003G127800 Sobic003G127800 Sobic001G329400--Sobic003G127800 Sobic009G129300 Sobic009G129300 Sobic001G329400--Sobic009G129300 Sobic001G329400--Sobic007G140800 Sobic001G329400--Sobic004G283100 Sobic001G491000 Sobic001G491000 Sobic001G329400--Sobic001G491000 Sobic001G329400--Sobic009G104800 Sobic003G234200--Sobic003G431900 Sobic003G234200--Sobic008G053200 Sobic003G234200--Sobic002G324500 Sobic003G234200--Sobic001G329400 Sobic003G234200--Sobic005G165500 Sobic003G234200--Sobic003G367500 Sobic003G234200--Sobic006G244000 Sobic003G234200--Sobic001G519800 Sobic003G234200--Sobic009G129300
Octagon: transcription factors


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