Gene annotation
Transcriptome id Sobic.008G091400.1
Synonym NDPK1
Functional annotation nucleoside diphosphate kinase, putative, expressed
UniProt A0A1B6PCM4
Pfam PF00334
Panther DB PTHR11349 PTHR11349:SF66
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006241; CTP biosynthetic process GO:0006228UTP biosynthetic process GO:0006183GTP biosynthetic process GO:0006165nucleoside diphosphate phosphorylation GO:0004550nucleoside diphosphate kinase activity


Orthologs (automatic annotation)
TAIR AT4G09320 : Nucleoside diphosphate kinase family protein
RAP-DB (Rice) LOC_Os10g41410.1 : nucleoside diphosphate kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G347600 pentatricopeptide containing protein, putative, expressed -
2 Sobic.010G035400 expressed protein -
3 Sobic.007G136200 expressed protein -
4 Sobic.002G220900 expressed protein -
5 Sobic.K031800 inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
6 Sobic.004G337400 ELMO/CED-12 family protein, putative, expressed -
7 Sobic.006G077400 PAP fibrillin family domain containing protein, expressed -
8 Sobic.007G225500 expressed protein -
9 Sobic.005G073200 DUF803 domain containing, putative, expressed -
10 Sobic.003G318300 pentatricopeptide repeat domain containing protein, putative, expressed -
11 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase
12 Sobic.007G103400 expressed protein -
13 Sobic.002G275300 deoxyribodipyrimidine photolyase family protein, expressed -
14 Sobic.004G125700 isochorismatase family protein, putative, expressed -
15 Sobic.006G128300 DUF565 domain containing protein, putative, expressed -
16 Sobic.003G402000 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
17 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
18 Sobic.003G247400 OsCttP1 - Putative C-terminal processing peptidase homologue, expressed -
19 Sobic.003G219200 MEE18, putative, expressed -
20 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)


Gene co-expression network
sample Sobic008G091400 Sobic008G091400 Sobic002G347600 Sobic002G347600 Sobic008G091400--Sobic002G347600 Sobic010G035400 Sobic010G035400 Sobic008G091400--Sobic010G035400 Sobic007G136200 Sobic007G136200 Sobic008G091400--Sobic007G136200 Sobic002G220900 Sobic002G220900 Sobic008G091400--Sobic002G220900 SobicK031800 SobicK031800 Sobic008G091400--SobicK031800 Sobic004G337400 Sobic004G337400 Sobic008G091400--Sobic004G337400 Sobic006G077400 Sobic006G077400 Sobic008G091400--Sobic006G077400 Sobic007G225500 Sobic007G225500 Sobic008G091400--Sobic007G225500 Sobic005G073200 Sobic005G073200 Sobic008G091400--Sobic005G073200 Sobic006G038500 Sobic006G038500 Sobic002G347600--Sobic006G038500 Sobic003G301300 Sobic003G301300 Sobic002G347600--Sobic003G301300 Sobic004G336200 Sobic004G336200 Sobic002G347600--Sobic004G336200 Sobic002G347600--Sobic008G091400 Sobic006G128300 Sobic006G128300 Sobic002G347600--Sobic006G128300 Sobic003G247400 Sobic003G247400 Sobic002G347600--Sobic003G247400 Sobic003G141100 Sobic003G141100 Sobic002G347600--Sobic003G141100 Sobic004G328400 Sobic004G328400 Sobic002G347600--Sobic004G328400 Sobic009G121000 Sobic009G121000 Sobic002G347600--Sobic009G121000 Sobic007G103400 Sobic007G103400 Sobic010G035400--Sobic007G103400 Sobic010G035400--Sobic007G225500 Sobic010G035400--Sobic004G336200 Sobic004G353100 Sobic004G353100 Sobic010G035400--Sobic004G353100 Sobic009G237000 Sobic009G237000 Sobic010G035400--Sobic009G237000 Sobic002G275300 Sobic002G275300 Sobic010G035400--Sobic002G275300 Sobic003G160800 Sobic003G160800 Sobic010G035400--Sobic003G160800 Sobic006G207800 Sobic006G207800 Sobic010G035400--Sobic006G207800 Sobic003G387100 Sobic003G387100 Sobic010G035400--Sobic003G387100 Sobic006G158100 Sobic006G158100 Sobic007G136200--Sobic006G158100 Sobic010G043800 Sobic010G043800 Sobic007G136200--Sobic010G043800 Sobic001G504400 Sobic001G504400 Sobic007G136200--Sobic001G504400 Sobic010G002700 Sobic010G002700 Sobic007G136200--Sobic010G002700 Sobic007G136200--Sobic007G103400 Sobic001G169900 Sobic001G169900 Sobic007G136200--Sobic001G169900 Sobic007G136200--Sobic004G337400 Sobic007G108900 Sobic007G108900 Sobic007G136200--Sobic007G108900 Sobic001G378100 Sobic001G378100 Sobic007G136200--Sobic001G378100 Sobic003G398800 Sobic003G398800 Sobic002G220900--Sobic003G398800 Sobic008G033000 Sobic008G033000 Sobic002G220900--Sobic008G033000 Sobic002G220900--Sobic007G103400 Sobic002G220900--Sobic001G504400 Sobic007G009200 Sobic007G009200 Sobic002G220900--Sobic007G009200 Sobic009G237100 Sobic009G237100 Sobic002G220900--Sobic009G237100 Sobic003G185900 Sobic003G185900 Sobic002G220900--Sobic003G185900 Sobic005G204200 Sobic005G204200 Sobic002G220900--Sobic005G204200 Sobic002G220900--Sobic010G035400 Sobic003G219200 Sobic003G219200 SobicK031800--Sobic003G219200 Sobic008G188600 Sobic008G188600 SobicK031800--Sobic008G188600 SobicK031800--Sobic003G387100 Sobic009G175500 Sobic009G175500 SobicK031800--Sobic009G175500 Sobic005G149400 Sobic005G149400 SobicK031800--Sobic005G149400 SobicK031800--Sobic004G336200 SobicK031800--Sobic010G035400 SobicK031800--Sobic002G275300 Sobic006G102000 Sobic006G102000 SobicK031800--Sobic006G102000 Sobic004G337400--Sobic007G136200 Sobic004G337400--Sobic001G378100 Sobic006G232600 Sobic006G232600 Sobic004G337400--Sobic006G232600 Sobic004G019800 Sobic004G019800 Sobic004G337400--Sobic004G019800 Sobic003G077700 Sobic003G077700 Sobic004G337400--Sobic003G077700 Sobic004G337400--Sobic010G002700 Sobic005G106600 Sobic005G106600 Sobic004G337400--Sobic005G106600 Sobic005G084500 Sobic005G084500 Sobic004G337400--Sobic005G084500 Sobic004G337400--Sobic010G043800 Sobic003G024300 Sobic003G024300 Sobic006G077400--Sobic003G024300 Sobic006G077400--Sobic007G225500 Sobic006G077400--Sobic007G009200 Sobic005G200200 Sobic005G200200 Sobic006G077400--Sobic005G200200 Sobic007G140800 Sobic007G140800 Sobic006G077400--Sobic007G140800 Sobic001G491000 Sobic001G491000 Sobic006G077400--Sobic001G491000 Sobic010G201700 Sobic010G201700 Sobic006G077400--Sobic010G201700 Sobic006G077400--Sobic010G035400 Sobic006G238200 Sobic006G238200 Sobic006G077400--Sobic006G238200 Sobic003G002300 Sobic003G002300 Sobic007G225500--Sobic003G002300 Sobic007G225500--Sobic010G035400 Sobic008G102000 Sobic008G102000 Sobic007G225500--Sobic008G102000 Sobic007G052400 Sobic007G052400 Sobic007G225500--Sobic007G052400 Sobic008G171300 Sobic008G171300 Sobic007G225500--Sobic008G171300 Sobic009G043000 Sobic009G043000 Sobic007G225500--Sobic009G043000 Sobic007G225500--Sobic002G275300 Sobic007G225500--Sobic006G077400 Sobic007G225500--Sobic010G201700 Sobic008G006200 Sobic008G006200 Sobic005G073200--Sobic008G006200 Sobic003G409700 Sobic003G409700 Sobic005G073200--Sobic003G409700 Sobic001G244600 Sobic001G244600 Sobic005G073200--Sobic001G244600 Sobic009G140300 Sobic009G140300 Sobic005G073200--Sobic009G140300 Sobic004G202200 Sobic004G202200 Sobic005G073200--Sobic004G202200 Sobic003G306200 Sobic003G306200 Sobic005G073200--Sobic003G306200 Sobic005G073200--Sobic002G275300 Sobic005G073200--Sobic002G220900 Sobic005G073200--Sobic001G491000
Octagon: transcription factors


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