Gene annotation
Transcriptome id Sobic.005G073200.1
Synonym Sb05g006060
Functional annotation DUF803 domain containing, putative, expressed
UniProt C5Y6T4
Pfam PF05653
Panther DB PTHR12570 PTHR12570:SF21
NCBI CDD KOG2922; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015693magnesium ion transport GO:0015095magnesium ion transmembrane transporter activity


Orthologs (automatic annotation)
TAIR AT1G71900 : Protein of unknown function (DUF803)
RAP-DB (Rice) LOC_Os11g09140.1 : DUF803 domain containing, putative, expressed
MaizeGDB (Corn) Zm00025a029605 , Zm00025a015620 , Zm00025a026560
Brachypodium KQJ89061 , KQK06160
Barley HORVU4Hr1G043800.11 , HORVU4Hr1G043800.10 , HORVU4Hr1G043800.9 , HORVU4Hr1G043800.8 , HORVU4Hr1G043800.7 , HORVU4Hr1G043800.6 , HORVU4Hr1G043800.5 , HORVU4Hr1G043800.4 , HORVU4Hr1G043800.3 , HORVU4Hr1G043800.2 , HORVU4Hr1G043800.1 , HORVU1Hr1G065000.8 , HORVU1Hr1G065000.9 , HORVU1Hr1G065000.6 , HORVU1Hr1G065000.7 , HORVU1Hr1G065000.5 , HORVU1Hr1G065000.3 , HORVU1Hr1G065000.1 , HORVU1Hr1G065000.10
Wheat TraesCS1D02G264900 , TraesCS4B02G101200 , TraesCS4A02G215000 , TraesCS4D02G097900 , TraesCS4D02G097900 , TraesCS1B02G275400 , TraesCS1A02G264700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G006200 macrophage migration inhibitory factor, putative, expressed -
2 Sobic.003G409700 rieske domain containing protein, expressed -
3 Sobic.001G244600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@KIP1, putative, expressed -
4 Sobic.009G140300 MLO domain containing protein, putative, expressed K08472: mlo protein
5 Sobic.004G202200 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu
6 Sobic.003G306200 hemimethylated DNA binding domain containing protein, expressed -
7 Sobic.002G275300 deoxyribodipyrimidine photolyase family protein, expressed -
8 Sobic.002G220900 expressed protein -
9 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
10 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
11 Sobic.001G217900 PPR repeat domain containing protein, putative, expressed -
12 Sobic.007G157300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
13 Sobic.001G499100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
14 Sobic.009G256100 expressed protein -
15 Sobic.009G133700 expressed protein -
16 Sobic.001G289500 kinase, pfkB family, putative, expressed -
17 Sobic.003G005000 expressed protein -
18 Sobic.008G129900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.003G398800 expressed protein -
20 Sobic.006G235350 - -


Gene co-expression network
sample Sobic005G073200 Sobic005G073200 Sobic008G006200 Sobic008G006200 Sobic005G073200--Sobic008G006200 Sobic003G409700 Sobic003G409700 Sobic005G073200--Sobic003G409700 Sobic001G244600 Sobic001G244600 Sobic005G073200--Sobic001G244600 Sobic009G140300 Sobic009G140300 Sobic005G073200--Sobic009G140300 Sobic004G202200 Sobic004G202200 Sobic005G073200--Sobic004G202200 Sobic003G306200 Sobic003G306200 Sobic005G073200--Sobic003G306200 Sobic002G275300 Sobic002G275300 Sobic005G073200--Sobic002G275300 Sobic002G220900 Sobic002G220900 Sobic005G073200--Sobic002G220900 Sobic001G491000 Sobic001G491000 Sobic005G073200--Sobic001G491000 Sobic008G006200--Sobic005G073200 Sobic002G279700 Sobic002G279700 Sobic008G006200--Sobic002G279700 SobicK031800 SobicK031800 Sobic008G006200--SobicK031800 Sobic003G219200 Sobic003G219200 Sobic008G006200--Sobic003G219200 Sobic008G006200--Sobic002G275300 Sobic004G268000 Sobic004G268000 Sobic008G006200--Sobic004G268000 Sobic009G129300 Sobic009G129300 Sobic008G006200--Sobic009G129300 Sobic008G006200--Sobic009G140300 Sobic010G181300 Sobic010G181300 Sobic008G006200--Sobic010G181300 Sobic003G341300 Sobic003G341300 Sobic003G409700--Sobic003G341300 Sobic009G133700 Sobic009G133700 Sobic003G409700--Sobic009G133700 Sobic007G135800 Sobic007G135800 Sobic003G409700--Sobic007G135800 Sobic006G235400 Sobic006G235400 Sobic003G409700--Sobic006G235400 Sobic006G161500 Sobic006G161500 Sobic003G409700--Sobic006G161500 Sobic003G380200 Sobic003G380200 Sobic003G409700--Sobic003G380200 Sobic004G128900 Sobic004G128900 Sobic003G409700--Sobic004G128900 Sobic007G157300 Sobic007G157300 Sobic003G409700--Sobic007G157300 Sobic003G228300 Sobic003G228300 Sobic003G409700--Sobic003G228300 Sobic008G129900 Sobic008G129900 Sobic001G244600--Sobic008G129900 Sobic010G104800 Sobic010G104800 Sobic001G244600--Sobic010G104800 Sobic001G244600--Sobic006G161500 Sobic009G256100 Sobic009G256100 Sobic001G244600--Sobic009G256100 Sobic001G073300 Sobic001G073300 Sobic001G244600--Sobic001G073300 Sobic007G058100 Sobic007G058100 Sobic001G244600--Sobic007G058100 Sobic001G217900 Sobic001G217900 Sobic001G244600--Sobic001G217900 Sobic008G038500 Sobic008G038500 Sobic001G244600--Sobic008G038500 Sobic010G231300 Sobic010G231300 Sobic001G244600--Sobic010G231300 Sobic009G140300--Sobic010G181300 Sobic003G431700 Sobic003G431700 Sobic009G140300--Sobic003G431700 Sobic004G303200 Sobic004G303200 Sobic009G140300--Sobic004G303200 Sobic007G225500 Sobic007G225500 Sobic009G140300--Sobic007G225500 Sobic006G102000 Sobic006G102000 Sobic009G140300--Sobic006G102000 Sobic006G207800 Sobic006G207800 Sobic009G140300--Sobic006G207800 Sobic002G233700 Sobic002G233700 Sobic009G140300--Sobic002G233700 Sobic009G140300--Sobic001G491000 Sobic001G289500 Sobic001G289500 Sobic009G140300--Sobic001G289500 Sobic004G202200--Sobic001G289500 Sobic006G235350 Sobic006G235350 Sobic004G202200--Sobic006G235350 Sobic006G140500 Sobic006G140500 Sobic004G202200--Sobic006G140500 Sobic004G202200--Sobic009G133700 Sobic001G029600 Sobic001G029600 Sobic004G202200--Sobic001G029600 Sobic003G094100 Sobic003G094100 Sobic004G202200--Sobic003G094100 Sobic003G005000 Sobic003G005000 Sobic004G202200--Sobic003G005000 Sobic001G015200 Sobic001G015200 Sobic004G202200--Sobic001G015200 Sobic007G181400 Sobic007G181400 Sobic004G202200--Sobic007G181400 Sobic007G103400 Sobic007G103400 Sobic003G306200--Sobic007G103400 Sobic003G398800 Sobic003G398800 Sobic003G306200--Sobic003G398800 Sobic003G306200--Sobic002G275300 Sobic002G298800 Sobic002G298800 Sobic003G306200--Sobic002G298800 Sobic002G198300 Sobic002G198300 Sobic003G306200--Sobic002G198300 Sobic010G035400 Sobic010G035400 Sobic003G306200--Sobic010G035400 Sobic009G056700 Sobic009G056700 Sobic003G306200--Sobic009G056700 Sobic006G238200 Sobic006G238200 Sobic003G306200--Sobic006G238200 Sobic006G142600 Sobic006G142600 Sobic003G306200--Sobic006G142600 Sobic002G275300--Sobic006G238200 Sobic002G275300--Sobic010G181300 Sobic002G275300--Sobic001G491000 Sobic002G275300--Sobic002G298800 Sobic007G108900 Sobic007G108900 Sobic002G275300--Sobic007G108900 Sobic002G275300--Sobic007G225500 Sobic002G275300--Sobic007G103400 Sobic002G275300--Sobic010G035400 Sobic002G275300--Sobic003G306200 Sobic002G220900--Sobic003G398800 Sobic008G033000 Sobic008G033000 Sobic002G220900--Sobic008G033000 Sobic002G220900--Sobic007G103400 Sobic001G504400 Sobic001G504400 Sobic002G220900--Sobic001G504400 Sobic007G009200 Sobic007G009200 Sobic002G220900--Sobic007G009200 Sobic009G237100 Sobic009G237100 Sobic002G220900--Sobic009G237100 Sobic003G185900 Sobic003G185900 Sobic002G220900--Sobic003G185900 Sobic005G204200 Sobic005G204200 Sobic002G220900--Sobic005G204200 Sobic002G220900--Sobic010G035400 Sobic001G491000--Sobic006G238200 Sobic001G491000--Sobic010G181300 Sobic001G100000 Sobic001G100000 Sobic001G491000--Sobic001G100000 Sobic001G491000--Sobic002G275300 Sobic001G491000--Sobic001G289500 Sobic001G491000--Sobic009G129300 Sobic002G370600 Sobic002G370600 Sobic001G491000--Sobic002G370600 Sobic001G491000--Sobic009G237100 Sobic004G305800 Sobic004G305800 Sobic001G491000--Sobic004G305800
Octagon: transcription factors


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