Gene annotation
Transcriptome id Sobic.008G006200.2
Synonym Sb08g000670
Functional annotation macrophage migration inhibitory factor, putative, expressed
UniProt C5YQ39
Pfam PF01187
Panther DB PTHR11954 PTHR11954:SF20
NCBI CDD KOG1759; Macrophage migration inhibitory factor
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01650 : Tautomerase/MIF superfamily protein
RAP-DB (Rice) LOC_Os11g01600.1 : macrophage migration inhibitory factor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G047530.2 , HORVU5Hr1G047530.3 , HORVU5Hr1G047530.1
Wheat TraesCS5D02G156900 , TraesCS5D02G156900 , TraesCS5B02G150300 , TraesCS5A02G151700 , TraesCS5A02G151700 , TraesCS5B02G150300
Populus -


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cDNA sequences
Sobic.008G006200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G073200 DUF803 domain containing, putative, expressed -
2 Sobic.002G279700 3-dehydroquinate synthase, putative, expressed K01735: 3-dehydroquinate synthase
3 Sobic.K031800 inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
4 Sobic.003G219200 MEE18, putative, expressed -
5 Sobic.002G275300 deoxyribodipyrimidine photolyase family protein, expressed -
6 Sobic.004G268000 -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
7 Sobic.009G129300 heat shock protein DnaJ, putative, expressed -
8 Sobic.009G140300 MLO domain containing protein, putative, expressed K08472: mlo protein
9 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
10 Sobic.004G303200 cytochrome b561, putative, expressed K08360: cytochrome b-561
11 Sobic.002G233700 -(PubMedID : 26976818)@dicarboxylate transporter 2(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
12 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
13 Sobic.003G345500 ureidoglycolate hydrolase, putative, expressed -
14 Sobic.010G079000 Phosphotyrosine protein phosphatases superfamily protein(PubMedID : 26465154)@Phosphotyrosine protein phosphatases superfamily protein(PubMedID : 26465154)@tyrosine phosphatase family protein, putative, expressed K18045: SIW14, tyrosine-protein phosphatase SIW14
15 Sobic.003G306200 hemimethylated DNA binding domain containing protein, expressed -
16 Sobic.007G225500 expressed protein -
17 Sobic.006G102000 PAP fibrillin family domain containing protein, expressed -
18 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
19 Sobic.006G265900 thioredoxin, putative, expressed K03671: thioredoxin 1
20 Sobic.001G436400 immature colon carcinoma transcript 1 protein precursor, putative, expressed K15033: peptidyl-tRNA hydrolase ICT1


Gene co-expression network
sample Sobic008G006200 Sobic008G006200 Sobic005G073200 Sobic005G073200 Sobic008G006200--Sobic005G073200 Sobic002G279700 Sobic002G279700 Sobic008G006200--Sobic002G279700 SobicK031800 SobicK031800 Sobic008G006200--SobicK031800 Sobic003G219200 Sobic003G219200 Sobic008G006200--Sobic003G219200 Sobic002G275300 Sobic002G275300 Sobic008G006200--Sobic002G275300 Sobic004G268000 Sobic004G268000 Sobic008G006200--Sobic004G268000 Sobic009G129300 Sobic009G129300 Sobic008G006200--Sobic009G129300 Sobic009G140300 Sobic009G140300 Sobic008G006200--Sobic009G140300 Sobic010G181300 Sobic010G181300 Sobic008G006200--Sobic010G181300 Sobic005G073200--Sobic008G006200 Sobic003G409700 Sobic003G409700 Sobic005G073200--Sobic003G409700 Sobic001G244600 Sobic001G244600 Sobic005G073200--Sobic001G244600 Sobic005G073200--Sobic009G140300 Sobic004G202200 Sobic004G202200 Sobic005G073200--Sobic004G202200 Sobic003G306200 Sobic003G306200 Sobic005G073200--Sobic003G306200 Sobic005G073200--Sobic002G275300 Sobic002G220900 Sobic002G220900 Sobic005G073200--Sobic002G220900 Sobic001G491000 Sobic001G491000 Sobic005G073200--Sobic001G491000 Sobic002G128900 Sobic002G128900 Sobic002G279700--Sobic002G128900 Sobic006G261700 Sobic006G261700 Sobic002G279700--Sobic006G261700 Sobic001G295300 Sobic001G295300 Sobic002G279700--Sobic001G295300 Sobic002G200900 Sobic002G200900 Sobic002G279700--Sobic002G200900 Sobic002G233700 Sobic002G233700 Sobic002G279700--Sobic002G233700 Sobic008G188600 Sobic008G188600 Sobic002G279700--Sobic008G188600 Sobic001G020100 Sobic001G020100 Sobic002G279700--Sobic001G020100 Sobic002G279700--Sobic008G006200 Sobic004G307400 Sobic004G307400 Sobic002G279700--Sobic004G307400 SobicK031800--Sobic003G219200 SobicK031800--Sobic008G188600 Sobic003G387100 Sobic003G387100 SobicK031800--Sobic003G387100 Sobic009G175500 Sobic009G175500 SobicK031800--Sobic009G175500 Sobic005G149400 Sobic005G149400 SobicK031800--Sobic005G149400 Sobic004G336200 Sobic004G336200 SobicK031800--Sobic004G336200 Sobic010G035400 Sobic010G035400 SobicK031800--Sobic010G035400 SobicK031800--Sobic002G275300 Sobic006G102000 Sobic006G102000 SobicK031800--Sobic006G102000 Sobic003G219200--SobicK031800 Sobic003G219200--Sobic010G035400 Sobic003G219200--Sobic002G275300 Sobic003G219200--Sobic006G102000 Sobic009G237100 Sobic009G237100 Sobic003G219200--Sobic009G237100 Sobic007G103400 Sobic007G103400 Sobic003G219200--Sobic007G103400 Sobic009G237000 Sobic009G237000 Sobic003G219200--Sobic009G237000 Sobic006G207800 Sobic006G207800 Sobic003G219200--Sobic006G207800 Sobic001G100000 Sobic001G100000 Sobic003G219200--Sobic001G100000 Sobic006G238200 Sobic006G238200 Sobic002G275300--Sobic006G238200 Sobic002G275300--Sobic010G181300 Sobic002G275300--Sobic001G491000 Sobic002G298800 Sobic002G298800 Sobic002G275300--Sobic002G298800 Sobic007G108900 Sobic007G108900 Sobic002G275300--Sobic007G108900 Sobic007G225500 Sobic007G225500 Sobic002G275300--Sobic007G225500 Sobic002G275300--Sobic007G103400 Sobic002G275300--Sobic010G035400 Sobic002G275300--Sobic003G306200 Sobic004G305800 Sobic004G305800 Sobic004G268000--Sobic004G305800 Sobic004G268000--Sobic009G129300 Sobic004G268000--Sobic001G491000 Sobic004G268000--Sobic002G275300 Sobic010G201700 Sobic010G201700 Sobic004G268000--Sobic010G201700 Sobic004G268000--Sobic001G020100 Sobic004G268000--Sobic006G238200 Sobic002G370600 Sobic002G370600 Sobic004G268000--Sobic002G370600 Sobic004G268000--Sobic010G181300 Sobic009G129300--Sobic001G491000 Sobic009G129300--Sobic010G181300 Sobic003G398800 Sobic003G398800 Sobic009G129300--Sobic003G398800 Sobic003G127800 Sobic003G127800 Sobic009G129300--Sobic003G127800 Sobic009G129300--Sobic004G305800 Sobic009G129300--Sobic006G238200 Sobic009G129300--Sobic002G275300 Sobic009G129300--Sobic004G268000 Sobic007G161500 Sobic007G161500 Sobic009G129300--Sobic007G161500 Sobic009G140300--Sobic010G181300 Sobic003G431700 Sobic003G431700 Sobic009G140300--Sobic003G431700 Sobic004G303200 Sobic004G303200 Sobic009G140300--Sobic004G303200 Sobic009G140300--Sobic007G225500 Sobic009G140300--Sobic006G102000 Sobic009G140300--Sobic006G207800 Sobic009G140300--Sobic002G233700 Sobic009G140300--Sobic001G491000 Sobic001G289500 Sobic001G289500 Sobic009G140300--Sobic001G289500 Sobic010G181300--Sobic001G491000 Sobic010G181300--Sobic002G275300 Sobic010G181300--Sobic006G238200 Sobic010G181300--Sobic007G108900 Sobic010G181300--Sobic009G129300 Sobic010G181300--Sobic001G289500 Sobic010G181300--Sobic006G102000 Sobic010G181300--Sobic002G370600 Sobic010G181300--Sobic003G398800
Octagon: transcription factors


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