Gene annotation
Transcriptome id Sobic.004G305800.1,Sobic.004G305800.2,Sobic.004G305800.4,Sobic.004G305800.3
Synonym Sb04g033880
Functional annotation expressed protein
UniProt A0A194YSI0 , A0A194YSD0 , A0A194YSD1 , A0A1Z5RPT9
Pfam PF14159
Panther DB PTHR33222 PTHR33222:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38100 : -
RAP-DB (Rice) LOC_Os02g52260.1 : expressed protein
MaizeGDB (Corn) Zm00025a022188 , Zm00025a033119
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G370600 - -
2 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
3 Sobic.005G056400 Fructose-bisphosphate aldolase(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Fructose-bisphosphate aldolase, putative (Os)"(PubMedID : 27208977)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
4 Sobic.009G129300 heat shock protein DnaJ, putative, expressed -
5 Sobic.004G268000 -(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
6 Sobic.010G201700 GA16396-PA, putative, expressed -
7 Sobic.007G161500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PGR5, putative, expressed -
8 Sobic.003G431900 -(PubMedID : 26976818)@expressed protein K07562: nonsense-mediated mRNA decay protein 3
9 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.004G283100 -(PubMedID : 26465154)@expressed protein -
11 Sobic.005G165500 OsSub17 - Putative Subtilisin homologue, expressed -
12 Sobic.004G272100 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
13 Sobic.003G370000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chlorophyll A-B binding protein, putative, expressed K03542: photosystem II 22kDa protein
14 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
15 Sobic.008G053200 fructose-bisphosphate aldolase 2(PubMedID : 26465154)@fructose-bisphosphate aldolase 2("PubMedID : 26759170,PubMedID : 24597475")@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
16 Sobic.003G127800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.004G238600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@starch synthase, putative, expressed K00703: starch synthase
18 Sobic.001G329400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
19 Sobic.001G100000 glucose-1-phosphate adenylyltransferase large subunit, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
20 Sobic.003G024300 glutathione gamma-glutamylcysteinyltransferase 1, putative, expressed K05941: glutathione gamma-glutamylcysteinyltransferase


Gene co-expression network
sample Sobic004G305800 Sobic004G305800 Sobic002G370600 Sobic002G370600 Sobic004G305800--Sobic002G370600 Sobic001G491000 Sobic001G491000 Sobic004G305800--Sobic001G491000 Sobic005G056400 Sobic005G056400 Sobic004G305800--Sobic005G056400 Sobic009G129300 Sobic009G129300 Sobic004G305800--Sobic009G129300 Sobic004G268000 Sobic004G268000 Sobic004G305800--Sobic004G268000 Sobic010G201700 Sobic010G201700 Sobic004G305800--Sobic010G201700 Sobic007G161500 Sobic007G161500 Sobic004G305800--Sobic007G161500 Sobic003G431900 Sobic003G431900 Sobic004G305800--Sobic003G431900 Sobic006G238200 Sobic006G238200 Sobic004G305800--Sobic006G238200 Sobic002G370600--Sobic004G305800 Sobic002G370600--Sobic001G491000 Sobic010G181300 Sobic010G181300 Sobic002G370600--Sobic010G181300 Sobic002G370600--Sobic006G238200 Sobic010G245200 Sobic010G245200 Sobic002G370600--Sobic010G245200 Sobic003G431700 Sobic003G431700 Sobic002G370600--Sobic003G431700 Sobic001G289500 Sobic001G289500 Sobic002G370600--Sobic001G289500 Sobic003G370000 Sobic003G370000 Sobic002G370600--Sobic003G370000 Sobic009G043000 Sobic009G043000 Sobic002G370600--Sobic009G043000 Sobic001G491000--Sobic006G238200 Sobic001G491000--Sobic010G181300 Sobic001G100000 Sobic001G100000 Sobic001G491000--Sobic001G100000 Sobic002G275300 Sobic002G275300 Sobic001G491000--Sobic002G275300 Sobic001G491000--Sobic001G289500 Sobic001G491000--Sobic009G129300 Sobic001G491000--Sobic002G370600 Sobic009G237100 Sobic009G237100 Sobic001G491000--Sobic009G237100 Sobic001G491000--Sobic004G305800 Sobic005G056400--Sobic007G161500 Sobic005G056400--Sobic004G305800 Sobic003G127800 Sobic003G127800 Sobic005G056400--Sobic003G127800 Sobic005G056400--Sobic003G370000 Sobic010G188300 Sobic010G188300 Sobic005G056400--Sobic010G188300 Sobic001G076900 Sobic001G076900 Sobic005G056400--Sobic001G076900 Sobic005G056400--Sobic001G491000 Sobic001G329400 Sobic001G329400 Sobic005G056400--Sobic001G329400 Sobic006G057866 Sobic006G057866 Sobic005G056400--Sobic006G057866 Sobic009G129300--Sobic001G491000 Sobic009G129300--Sobic010G181300 Sobic003G398800 Sobic003G398800 Sobic009G129300--Sobic003G398800 Sobic009G129300--Sobic003G127800 Sobic009G129300--Sobic004G305800 Sobic009G129300--Sobic006G238200 Sobic009G129300--Sobic002G275300 Sobic009G129300--Sobic004G268000 Sobic009G129300--Sobic007G161500 Sobic004G268000--Sobic004G305800 Sobic004G268000--Sobic009G129300 Sobic004G268000--Sobic001G491000 Sobic004G268000--Sobic002G275300 Sobic004G268000--Sobic010G201700 Sobic001G020100 Sobic001G020100 Sobic004G268000--Sobic001G020100 Sobic004G268000--Sobic006G238200 Sobic004G268000--Sobic002G370600 Sobic004G268000--Sobic010G181300 Sobic010G201700--Sobic009G043000 Sobic004G272100 Sobic004G272100 Sobic010G201700--Sobic004G272100 Sobic003G002300 Sobic003G002300 Sobic010G201700--Sobic003G002300 Sobic001G102800 Sobic001G102800 Sobic010G201700--Sobic001G102800 Sobic001G519800 Sobic001G519800 Sobic010G201700--Sobic001G519800 Sobic007G225500 Sobic007G225500 Sobic010G201700--Sobic007G225500 Sobic008G102000 Sobic008G102000 Sobic010G201700--Sobic008G102000 Sobic006G207800 Sobic006G207800 Sobic010G201700--Sobic006G207800 Sobic004G308700 Sobic004G308700 Sobic010G201700--Sobic004G308700 Sobic007G161500--Sobic005G056400 Sobic007G161500--Sobic003G127800 Sobic007G161500--Sobic010G188300 Sobic007G161500--Sobic001G329400 Sobic007G161500--Sobic003G370000 Sobic007G161500--Sobic001G491000 Sobic007G161500--Sobic001G289500 Sobic007G161500--Sobic004G305800 Sobic003G024300 Sobic003G024300 Sobic007G161500--Sobic003G024300 Sobic008G053200 Sobic008G053200 Sobic003G431900--Sobic008G053200 Sobic003G234200 Sobic003G234200 Sobic003G431900--Sobic003G234200 Sobic003G431900--Sobic004G305800 Sobic003G256700 Sobic003G256700 Sobic003G431900--Sobic003G256700 Sobic003G431900--Sobic001G519800 Sobic005G165500 Sobic005G165500 Sobic003G431900--Sobic005G165500 Sobic002G324500 Sobic002G324500 Sobic003G431900--Sobic002G324500 Sobic003G431900--Sobic004G308700 Sobic003G431900--Sobic004G272100 Sobic006G238200--Sobic001G491000 Sobic006G238200--Sobic002G275300 Sobic006G238200--Sobic010G181300 Sobic006G238200--Sobic001G100000 Sobic006G238200--Sobic009G237100 Sobic006G238200--Sobic003G398800 Sobic006G238200--Sobic001G289500 Sobic006G238200--Sobic002G370600 Sobic006G238200--Sobic007G225500
Octagon: transcription factors


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