Gene annotation
Transcriptome id Sobic.001G498000.1
Synonym Sb01g046520
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
tyrosine protein kinase domain containing protein, putative, expressed
UniProt C5WXS2
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF76
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G56460 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g06330.1 : tyrosine protein kinase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a000736
Brachypodium -
Barley -
Wheat -
Populus PNS23189 , PNT30585


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cDNA sequences
Sobic.001G498000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G219400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
2 Sobic.006G130300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@4-nitrophenylphosphatase, putative, expressed K19269: PGP, phosphoglycolate phosphatase
3 Sobic.003G391200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
4 Sobic.008G115900 mitochondrial carrier protein, putative, expressed -
5 Sobic.002G382700 heat shock protein DnaJ, putative, expressed -
6 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
7 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
8 Sobic.006G221000 starch synthase 3(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@soluble starch synthase 3, chloroplast precursor, putative, expressed -
9 Sobic.004G082300 WD domain, G-beta repeat domain containing protein, expressed -
10 Sobic.007G136200 expressed protein -
11 Sobic.004G169000 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
12 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
13 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
14 Sobic.002G341000 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
15 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
16 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
17 Sobic.005G106600 CGMC_MAPKCGMC_2.1 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
18 Sobic.001G283100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@lrgB-like family protein, expressed -
19 Sobic.004G328000 snf1-related kinase interactor 2, putative, expressed -
20 Sobic.001G020100 expressed protein -


Gene co-expression network
sample Sobic001G498000 Sobic001G498000 Sobic004G219400 Sobic004G219400 Sobic001G498000--Sobic004G219400 Sobic006G130300 Sobic006G130300 Sobic001G498000--Sobic006G130300 Sobic003G391200 Sobic003G391200 Sobic001G498000--Sobic003G391200 Sobic008G115900 Sobic008G115900 Sobic001G498000--Sobic008G115900 Sobic002G382700 Sobic002G382700 Sobic001G498000--Sobic002G382700 Sobic001G017300 Sobic001G017300 Sobic001G498000--Sobic001G017300 Sobic006G158100 Sobic006G158100 Sobic001G498000--Sobic006G158100 Sobic006G221000 Sobic006G221000 Sobic001G498000--Sobic006G221000 Sobic004G082300 Sobic004G082300 Sobic001G498000--Sobic004G082300 Sobic004G219400--Sobic001G498000 Sobic002G381700 Sobic002G381700 Sobic004G219400--Sobic002G381700 Sobic004G219400--Sobic003G391200 Sobic004G219400--Sobic001G017300 Sobic009G015100 Sobic009G015100 Sobic004G219400--Sobic009G015100 Sobic004G219400--Sobic006G130300 Sobic004G355700 Sobic004G355700 Sobic004G219400--Sobic004G355700 Sobic001G514800 Sobic001G514800 Sobic004G219400--Sobic001G514800 Sobic008G149000 Sobic008G149000 Sobic004G219400--Sobic008G149000 Sobic001G100000 Sobic001G100000 Sobic006G130300--Sobic001G100000 Sobic006G238200 Sobic006G238200 Sobic006G130300--Sobic006G238200 Sobic007G140800 Sobic007G140800 Sobic006G130300--Sobic007G140800 Sobic001G020100 Sobic001G020100 Sobic006G130300--Sobic001G020100 Sobic001G329400 Sobic001G329400 Sobic006G130300--Sobic001G329400 Sobic001G491000 Sobic001G491000 Sobic006G130300--Sobic001G491000 Sobic004G283100 Sobic004G283100 Sobic006G130300--Sobic004G283100 Sobic006G130300--Sobic008G115900 Sobic006G207800 Sobic006G207800 Sobic006G130300--Sobic006G207800 Sobic003G391200--Sobic002G382700 Sobic005G206300 Sobic005G206300 Sobic003G391200--Sobic005G206300 Sobic005G101200 Sobic005G101200 Sobic003G391200--Sobic005G101200 Sobic006G153400 Sobic006G153400 Sobic003G391200--Sobic006G153400 Sobic003G391200--Sobic001G017300 Sobic007G227100 Sobic007G227100 Sobic003G391200--Sobic007G227100 Sobic004G035900 Sobic004G035900 Sobic003G391200--Sobic004G035900 Sobic007G006400 Sobic007G006400 Sobic003G391200--Sobic007G006400 Sobic002G306800 Sobic002G306800 Sobic003G391200--Sobic002G306800 Sobic007G136200 Sobic007G136200 Sobic008G115900--Sobic007G136200 Sobic008G115900--Sobic006G158100 Sobic008G115900--Sobic006G130300 Sobic008G115900--Sobic006G207800 Sobic004G356400 Sobic004G356400 Sobic008G115900--Sobic004G356400 Sobic008G115900--Sobic001G017300 Sobic010G153900 Sobic010G153900 Sobic008G115900--Sobic010G153900 Sobic003G229300 Sobic003G229300 Sobic008G115900--Sobic003G229300 Sobic008G115900--Sobic001G491000 Sobic001G207800 Sobic001G207800 Sobic002G382700--Sobic001G207800 Sobic001G258200 Sobic001G258200 Sobic002G382700--Sobic001G258200 Sobic006G090100 Sobic006G090100 Sobic002G382700--Sobic006G090100 Sobic003G341300 Sobic003G341300 Sobic002G382700--Sobic003G341300 Sobic001G283100 Sobic001G283100 Sobic002G382700--Sobic001G283100 Sobic007G058100 Sobic007G058100 Sobic002G382700--Sobic007G058100 Sobic001G077300 Sobic001G077300 Sobic002G382700--Sobic001G077300 Sobic002G162400 Sobic002G162400 Sobic002G382700--Sobic002G162400 Sobic002G382700--Sobic007G227100 Sobic001G017300--Sobic006G158100 Sobic001G017300--Sobic004G356400 Sobic006G093800 Sobic006G093800 Sobic001G017300--Sobic006G093800 Sobic010G249700 Sobic010G249700 Sobic001G017300--Sobic010G249700 Sobic001G017300--Sobic007G136200 Sobic003G276300 Sobic003G276300 Sobic001G017300--Sobic003G276300 Sobic001G017300--Sobic005G101200 Sobic001G169900 Sobic001G169900 Sobic001G017300--Sobic001G169900 Sobic010G002700 Sobic010G002700 Sobic001G017300--Sobic010G002700 Sobic006G158100--Sobic007G136200 Sobic006G158100--Sobic001G017300 Sobic006G158100--Sobic001G258200 Sobic001G504400 Sobic001G504400 Sobic006G158100--Sobic001G504400 Sobic003G094100 Sobic003G094100 Sobic006G158100--Sobic003G094100 Sobic010G043800 Sobic010G043800 Sobic006G158100--Sobic010G043800 Sobic010G067100 Sobic010G067100 Sobic006G158100--Sobic010G067100 Sobic006G158100--Sobic001G169900 Sobic003G185900 Sobic003G185900 Sobic006G158100--Sobic003G185900 Sobic007G108900 Sobic007G108900 Sobic006G221000--Sobic007G108900 Sobic006G221000--Sobic001G283100 Sobic006G221000--Sobic001G207800 Sobic006G221000--Sobic006G090100 Sobic001G015200 Sobic001G015200 Sobic006G221000--Sobic001G015200 Sobic002G047400 Sobic002G047400 Sobic006G221000--Sobic002G047400 Sobic001G303200 Sobic001G303200 Sobic006G221000--Sobic001G303200 Sobic006G221000--Sobic004G035900 Sobic003G003450 Sobic003G003450 Sobic006G221000--Sobic003G003450 Sobic004G082300--Sobic007G058100 Sobic009G256100 Sobic009G256100 Sobic004G082300--Sobic009G256100 Sobic008G129900 Sobic008G129900 Sobic004G082300--Sobic008G129900 Sobic009G038701 Sobic009G038701 Sobic004G082300--Sobic009G038701 Sobic004G082300--Sobic001G258200 Sobic004G082300--Sobic002G382700 Sobic003G097600 Sobic003G097600 Sobic004G082300--Sobic003G097600 Sobic001G263100 Sobic001G263100 Sobic004G082300--Sobic001G263100 Sobic004G082300--Sobic006G153400
Octagon: transcription factors


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