Gene annotation
Transcriptome id Sobic.004G328000.3
Synonym Sb04g035720
Functional annotation snf1-related kinase interactor 2, putative, expressed
UniProt A0A1Z5RQ48
Pfam -
Panther DB PTHR37205 PTHR37205:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G80940 : -
RAP-DB (Rice) LOC_Os02g55080.1 : snf1-related kinase interactor 2, putative, expressed
MaizeGDB (Corn) Zm00025a022444
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G328000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G035900 expressed protein -
2 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
3 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
4 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
5 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
6 Sobic.006G142600 lipase class 3 family protein, putative, expressed -
7 Sobic.003G005000 expressed protein -
8 Sobic.007G157300 NAD dependent epimerase/dehydratase family protein, putative, expressed -
9 Sobic.001G283100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@lrgB-like family protein, expressed -
10 Sobic.007G108900 APE1, putative, expressed -
11 Sobic.001G394800 tetratricopeptide repeat domain containing protein, expressed -
12 Sobic.006G221000 starch synthase 3(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@soluble starch synthase 3, chloroplast precursor, putative, expressed -
13 Sobic.003G003450 - K01177: beta-amylase
14 Sobic.002G306800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monooxygenase, putative, expressed -
15 Sobic.003G391200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -
16 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.010G039500 genetic modifier, putative, expressed -
18 Sobic.007G136200 expressed protein -
19 Sobic.009G133700 expressed protein -
20 Sobic.001G514800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine acetyltransferase protein, putative, expressed K00640: serine O-acetyltransferase


Gene co-expression network
sample Sobic004G328000 Sobic004G328000 Sobic004G035900 Sobic004G035900 Sobic004G328000--Sobic004G035900 Sobic001G017300 Sobic001G017300 Sobic004G328000--Sobic001G017300 Sobic003G276300 Sobic003G276300 Sobic004G328000--Sobic003G276300 Sobic006G158100 Sobic006G158100 Sobic004G328000--Sobic006G158100 Sobic001G169900 Sobic001G169900 Sobic004G328000--Sobic001G169900 Sobic006G142600 Sobic006G142600 Sobic004G328000--Sobic006G142600 Sobic003G005000 Sobic003G005000 Sobic004G328000--Sobic003G005000 Sobic007G157300 Sobic007G157300 Sobic004G328000--Sobic007G157300 Sobic001G283100 Sobic001G283100 Sobic004G328000--Sobic001G283100 Sobic004G035900--Sobic003G005000 Sobic004G035900--Sobic001G283100 Sobic001G485100 Sobic001G485100 Sobic004G035900--Sobic001G485100 Sobic003G003450 Sobic003G003450 Sobic004G035900--Sobic003G003450 Sobic001G331600 Sobic001G331600 Sobic004G035900--Sobic001G331600 Sobic004G035900--Sobic007G157300 Sobic008G149100 Sobic008G149100 Sobic004G035900--Sobic008G149100 Sobic001G015200 Sobic001G015200 Sobic004G035900--Sobic001G015200 Sobic003G228300 Sobic003G228300 Sobic004G035900--Sobic003G228300 Sobic001G017300--Sobic006G158100 Sobic004G356400 Sobic004G356400 Sobic001G017300--Sobic004G356400 Sobic006G093800 Sobic006G093800 Sobic001G017300--Sobic006G093800 Sobic010G249700 Sobic010G249700 Sobic001G017300--Sobic010G249700 Sobic007G136200 Sobic007G136200 Sobic001G017300--Sobic007G136200 Sobic001G017300--Sobic003G276300 Sobic005G101200 Sobic005G101200 Sobic001G017300--Sobic005G101200 Sobic001G017300--Sobic001G169900 Sobic010G002700 Sobic010G002700 Sobic001G017300--Sobic010G002700 Sobic003G276300--Sobic010G002700 Sobic003G276300--Sobic001G017300 Sobic003G017100 Sobic003G017100 Sobic003G276300--Sobic003G017100 Sobic003G247400 Sobic003G247400 Sobic003G276300--Sobic003G247400 Sobic003G276300--Sobic006G142600 Sobic003G276300--Sobic001G169900 Sobic010G043800 Sobic010G043800 Sobic003G276300--Sobic010G043800 Sobic001G198100 Sobic001G198100 Sobic003G276300--Sobic001G198100 Sobic003G276300--Sobic007G136200 Sobic006G158100--Sobic007G136200 Sobic006G158100--Sobic001G017300 Sobic001G258200 Sobic001G258200 Sobic006G158100--Sobic001G258200 Sobic001G504400 Sobic001G504400 Sobic006G158100--Sobic001G504400 Sobic003G094100 Sobic003G094100 Sobic006G158100--Sobic003G094100 Sobic006G158100--Sobic010G043800 Sobic010G067100 Sobic010G067100 Sobic006G158100--Sobic010G067100 Sobic006G158100--Sobic001G169900 Sobic003G185900 Sobic003G185900 Sobic006G158100--Sobic003G185900 Sobic001G169900--Sobic010G002700 Sobic001G169900--Sobic006G158100 Sobic001G169900--Sobic010G043800 Sobic001G169900--Sobic007G136200 Sobic001G169900--Sobic001G198100 Sobic001G169900--Sobic006G142600 Sobic001G394800 Sobic001G394800 Sobic001G169900--Sobic001G394800 Sobic001G169900--Sobic001G017300 Sobic001G169900--Sobic003G017100 Sobic006G142600--Sobic010G043800 Sobic003G306200 Sobic003G306200 Sobic006G142600--Sobic003G306200 Sobic007G103400 Sobic007G103400 Sobic006G142600--Sobic007G103400 Sobic007G108900 Sobic007G108900 Sobic006G142600--Sobic007G108900 Sobic006G142600--Sobic007G136200 Sobic006G142600--Sobic001G169900 Sobic006G142600--Sobic006G158100 Sobic002G198300 Sobic002G198300 Sobic006G142600--Sobic002G198300 Sobic006G142600--Sobic003G094100 Sobic001G289500 Sobic001G289500 Sobic003G005000--Sobic001G289500 Sobic003G005000--Sobic003G094100 Sobic009G132000 Sobic009G132000 Sobic003G005000--Sobic009G132000 Sobic002G306800 Sobic002G306800 Sobic003G005000--Sobic002G306800 Sobic003G005000--Sobic007G108900 Sobic010G039500 Sobic010G039500 Sobic003G005000--Sobic010G039500 Sobic009G133700 Sobic009G133700 Sobic003G005000--Sobic009G133700 Sobic003G005000--Sobic007G157300 Sobic003G005000--Sobic004G035900 Sobic007G157300--Sobic009G133700 Sobic003G341300 Sobic003G341300 Sobic007G157300--Sobic003G341300 Sobic007G157300--Sobic003G094100 Sobic007G157300--Sobic001G283100 Sobic007G157300--Sobic007G108900 Sobic007G135800 Sobic007G135800 Sobic007G157300--Sobic007G135800 Sobic001G393300 Sobic001G393300 Sobic007G157300--Sobic001G393300 Sobic001G509200 Sobic001G509200 Sobic007G157300--Sobic001G509200 Sobic003G409700 Sobic003G409700 Sobic007G157300--Sobic003G409700 Sobic006G090100 Sobic006G090100 Sobic001G283100--Sobic006G090100 Sobic001G283100--Sobic003G094100 Sobic001G207800 Sobic001G207800 Sobic001G283100--Sobic001G207800 Sobic001G283100--Sobic003G341300 Sobic001G283100--Sobic007G108900 Sobic001G283100--Sobic001G393300 Sobic001G283100--Sobic007G157300 Sobic001G283100--Sobic001G509200 Sobic002G382700 Sobic002G382700 Sobic001G283100--Sobic002G382700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.