Gene annotation
Transcriptome id Sobic.008G187900.1
Synonym Sb08g022883
Functional annotation protein kinase domain containing protein, expressed
UniProt C5YT00
Pfam -
Panther DB PTHR35832 PTHR35832:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g14699.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G397200 - -
2 Sobic.005G127000 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
3 Sobic.010G241300 -(PubMedID : 26465154)@OsCML29 - Calmodulin-related calcium sensor protein, expressed -
4 Sobic.001G420300 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
5 Sobic.004G239100 -(PubMedID : 26465154)@expressed protein -
6 Sobic.004G122200 expressed protein -
7 Sobic.001G005200 expressed protein -
8 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
9 Sobic.008G066100 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed -
10 Sobic.005G123200 cbbY, putative, expressed -
11 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
12 Sobic.009G175500 acetyltransferase, GNAT family, putative, expressed -
13 Sobic.008G183200 LOL3, putative, expressed -
14 Sobic.003G371600 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
15 Sobic.009G164300 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
16 Sobic.010G245200 expressed protein -
17 Sobic.003G359100 sedoheptulose-bisphosphatase(PubMedID : 26465154)@fructose-1,6-bisphosphatase, putative, expressed K01100: sedoheptulose-bisphosphatase
18 Sobic.005G036100 phosphoglycerate mutase, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
19 Sobic.008G062500 -(PubMedID : 26976818)@glycine cleavage system H protein, putative, expressed K02437: gcvH, glycine cleavage system H protein
20 Sobic.002G120700 decarboxylase, putative, expressed K01592: tyrosine decarboxylase


Gene co-expression network
sample Sobic008G187900 Sobic008G187900 Sobic003G397200 Sobic003G397200 Sobic008G187900--Sobic003G397200 Sobic005G127000 Sobic005G127000 Sobic008G187900--Sobic005G127000 Sobic010G241300 Sobic010G241300 Sobic008G187900--Sobic010G241300 Sobic001G420300 Sobic001G420300 Sobic008G187900--Sobic001G420300 Sobic004G239100 Sobic004G239100 Sobic008G187900--Sobic004G239100 Sobic004G122200 Sobic004G122200 Sobic008G187900--Sobic004G122200 Sobic001G005200 Sobic001G005200 Sobic008G187900--Sobic001G005200 Sobic003G412900 Sobic003G412900 Sobic008G187900--Sobic003G412900 Sobic008G066100 Sobic008G066100 Sobic008G187900--Sobic008G066100 Sobic003G397200--Sobic010G241300 Sobic008G186400 Sobic008G186400 Sobic003G397200--Sobic008G186400 Sobic008G183200 Sobic008G183200 Sobic003G397200--Sobic008G183200 Sobic005G188600 Sobic005G188600 Sobic003G397200--Sobic005G188600 Sobic006G102400 Sobic006G102400 Sobic003G397200--Sobic006G102400 Sobic003G397200--Sobic008G187900 Sobic009G034600 Sobic009G034600 Sobic003G397200--Sobic009G034600 Sobic003G263001 Sobic003G263001 Sobic003G397200--Sobic003G263001 Sobic007G059500 Sobic007G059500 Sobic003G397200--Sobic007G059500 Sobic005G127000--Sobic007G059500 Sobic005G127000--Sobic008G183200 Sobic005G127000--Sobic010G241300 Sobic005G127000--Sobic004G122200 Sobic001G377500 Sobic001G377500 Sobic005G127000--Sobic001G377500 Sobic001G186200 Sobic001G186200 Sobic005G127000--Sobic001G186200 Sobic010G225600 Sobic010G225600 Sobic005G127000--Sobic010G225600 Sobic001G498300 Sobic001G498300 Sobic005G127000--Sobic001G498300 Sobic008G151000 Sobic008G151000 Sobic005G127000--Sobic008G151000 Sobic010G241300--Sobic008G183200 Sobic010G241300--Sobic007G059500 Sobic010G241300--Sobic005G127000 Sobic010G241300--Sobic004G122200 Sobic010G241300--Sobic003G397200 Sobic006G010800 Sobic006G010800 Sobic010G241300--Sobic006G010800 Sobic010G241300--Sobic009G034600 Sobic005G111500 Sobic005G111500 Sobic010G241300--Sobic005G111500 Sobic007G213300 Sobic007G213300 Sobic010G241300--Sobic007G213300 Sobic001G420300--Sobic003G412900 Sobic001G069000 Sobic001G069000 Sobic001G420300--Sobic001G069000 Sobic003G137100 Sobic003G137100 Sobic001G420300--Sobic003G137100 Sobic002G172700 Sobic002G172700 Sobic001G420300--Sobic002G172700 Sobic008G062400 Sobic008G062400 Sobic001G420300--Sobic008G062400 Sobic001G314200 Sobic001G314200 Sobic001G420300--Sobic001G314200 Sobic010G153900 Sobic010G153900 Sobic001G420300--Sobic010G153900 Sobic003G371600 Sobic003G371600 Sobic001G420300--Sobic003G371600 Sobic003G387100 Sobic003G387100 Sobic001G420300--Sobic003G387100 Sobic010G277600 Sobic010G277600 Sobic004G239100--Sobic010G277600 Sobic009G183700 Sobic009G183700 Sobic004G239100--Sobic009G183700 Sobic008G172700 Sobic008G172700 Sobic004G239100--Sobic008G172700 Sobic005G194100 Sobic005G194100 Sobic004G239100--Sobic005G194100 Sobic003G378600 Sobic003G378600 Sobic004G239100--Sobic003G378600 Sobic008G102000 Sobic008G102000 Sobic004G239100--Sobic008G102000 Sobic009G030900 Sobic009G030900 Sobic004G239100--Sobic009G030900 Sobic009G140600 Sobic009G140600 Sobic004G239100--Sobic009G140600 Sobic002G198600 Sobic002G198600 Sobic004G239100--Sobic002G198600 Sobic004G122200--Sobic008G183200 Sobic004G122200--Sobic005G127000 Sobic004G122200--Sobic010G241300 Sobic004G122200--Sobic008G066100 Sobic010G164200 Sobic010G164200 Sobic004G122200--Sobic010G164200 Sobic008G015100 Sobic008G015100 Sobic004G122200--Sobic008G015100 Sobic001G068301 Sobic001G068301 Sobic004G122200--Sobic001G068301 Sobic001G338700 Sobic001G338700 Sobic004G122200--Sobic001G338700 Sobic004G122200--Sobic001G377500 Sobic001G005200--Sobic003G378600 Sobic001G128600 Sobic001G128600 Sobic001G005200--Sobic001G128600 Sobic001G005200--Sobic008G102000 Sobic001G005200--Sobic009G140600 Sobic009G175500 Sobic009G175500 Sobic001G005200--Sobic009G175500 Sobic010G245200 Sobic010G245200 Sobic001G005200--Sobic010G245200 Sobic002G233700 Sobic002G233700 Sobic001G005200--Sobic002G233700 Sobic001G005200--Sobic003G387100 Sobic001G122300 Sobic001G122300 Sobic001G005200--Sobic001G122300 Sobic003G412900--Sobic001G069000 Sobic003G412900--Sobic003G387100 Sobic003G412900--Sobic001G314200 Sobic003G412900--Sobic008G102000 Sobic006G093900 Sobic006G093900 Sobic003G412900--Sobic006G093900 Sobic009G059300 Sobic009G059300 Sobic003G412900--Sobic009G059300 Sobic001G168800 Sobic001G168800 Sobic003G412900--Sobic001G168800 Sobic006G101500 Sobic006G101500 Sobic003G412900--Sobic006G101500 Sobic003G412900--Sobic009G030900 Sobic001G425400 Sobic001G425400 Sobic008G066100--Sobic001G425400 Sobic003G359100 Sobic003G359100 Sobic008G066100--Sobic003G359100 Sobic004G308700 Sobic004G308700 Sobic008G066100--Sobic004G308700 Sobic007G207800 Sobic007G207800 Sobic008G066100--Sobic007G207800 Sobic008G134800 Sobic008G134800 Sobic008G066100--Sobic008G134800 Sobic004G272100 Sobic004G272100 Sobic008G066100--Sobic004G272100 Sobic004G035500 Sobic004G035500 Sobic008G066100--Sobic004G035500 Sobic007G223500 Sobic007G223500 Sobic008G066100--Sobic007G223500 Sobic002G030500 Sobic002G030500 Sobic008G066100--Sobic002G030500
Octagon: transcription factors


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