Gene annotation
Transcriptome id Sobic.006G249050.1
Synonym -
Functional annotation -
UniProt A0A1Z5RG52
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G036600 calmodulin-binding protein, putative, expressed -
2 Sobic.001G217700 possible lysine decarboxylase domain containing protein, expressed -
3 Sobic.002G000700 expressed protein -
4 Sobic.004G001300 -(PubMedID : 26976818)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15893: glycerate dehydrogenase
5 Sobic.007G204900 extracellular ligand-gated ion channel, putative, expressed -
6 Sobic.007G213700 -(PubMedID : 26976818)@aminotransferase, putative, expressed K00830: alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase
7 Sobic.007G052900 acetyltransferase, GNAT family, putative, expressed -
8 Sobic.008G183200 LOL3, putative, expressed -
9 Sobic.004G122200 expressed protein -
10 Sobic.006G102400 transporter family protein, putative, expressed -
11 Sobic.003G137100 protoporphyrinogen oxidase, chloroplast precursor, putative, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
12 Sobic.001G098301 - -
13 Sobic.003G305000 Unnamed(PubMedID : 24676859)@CIN-like (ClassII) Subclade 9 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
14 Sobic.002G114700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.010G164200 osFTL12 FT-Like12 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
16 Sobic.005G036100 phosphoglycerate mutase, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
17 Sobic.001G118100 B-box (BBX) protein(PubMedID : 30626335)@CCT/B-box zinc finger protein, putative, expressed -
18 Sobic.003G110700 nuclear transport factor, putative, expressed -
19 Sobic.001G102300 homeobox domain containing protein, expressed -
20 Sobic.003G210801 - -


Gene co-expression network
sample Sobic006G249050 Sobic006G249050 Sobic005G036600 Sobic005G036600 Sobic006G249050--Sobic005G036600 Sobic001G217700 Sobic001G217700 Sobic006G249050--Sobic001G217700 Sobic002G000700 Sobic002G000700 Sobic006G249050--Sobic002G000700 Sobic004G001300 Sobic004G001300 Sobic006G249050--Sobic004G001300 Sobic007G204900 Sobic007G204900 Sobic006G249050--Sobic007G204900 Sobic007G213700 Sobic007G213700 Sobic006G249050--Sobic007G213700 Sobic007G052900 Sobic007G052900 Sobic006G249050--Sobic007G052900 Sobic008G183200 Sobic008G183200 Sobic006G249050--Sobic008G183200 Sobic004G122200 Sobic004G122200 Sobic006G249050--Sobic004G122200 Sobic001G118100 Sobic001G118100 Sobic005G036600--Sobic001G118100 Sobic001G269300 Sobic001G269300 Sobic005G036600--Sobic001G269300 Sobic005G036600--Sobic007G052900 Sobic006G060200 Sobic006G060200 Sobic005G036600--Sobic006G060200 Sobic006G180432 Sobic006G180432 Sobic005G036600--Sobic006G180432 Sobic005G036600--Sobic006G249050 Sobic004G065650 Sobic004G065650 Sobic005G036600--Sobic004G065650 Sobic005G036600--Sobic001G217700 Sobic009G212700 Sobic009G212700 Sobic005G036600--Sobic009G212700 Sobic001G217700--Sobic006G060200 Sobic002G104000 Sobic002G104000 Sobic001G217700--Sobic002G104000 Sobic001G217700--Sobic006G249050 Sobic002G376700 Sobic002G376700 Sobic001G217700--Sobic002G376700 Sobic003G110700 Sobic003G110700 Sobic001G217700--Sobic003G110700 Sobic001G217700--Sobic001G269300 Sobic006G102400 Sobic006G102400 Sobic001G217700--Sobic006G102400 Sobic001G217700--Sobic005G036600 Sobic010G246600 Sobic010G246600 Sobic001G217700--Sobic010G246600 Sobic003G137100 Sobic003G137100 Sobic002G000700--Sobic003G137100 Sobic002G358500 Sobic002G358500 Sobic002G000700--Sobic002G358500 Sobic002G000700--Sobic007G213700 Sobic002G000700--Sobic004G001300 Sobic002G000700--Sobic006G249050 Sobic001G060401 Sobic001G060401 Sobic002G000700--Sobic001G060401 Sobic002G000700--Sobic007G204900 Sobic010G164200 Sobic010G164200 Sobic002G000700--Sobic010G164200 Sobic007G150100 Sobic007G150100 Sobic002G000700--Sobic007G150100 Sobic004G001300--Sobic001G118100 Sobic004G001300--Sobic007G204900 Sobic008G001000 Sobic008G001000 Sobic004G001300--Sobic008G001000 Sobic003G442700 Sobic003G442700 Sobic004G001300--Sobic003G442700 Sobic003G161000 Sobic003G161000 Sobic004G001300--Sobic003G161000 Sobic001G098301 Sobic001G098301 Sobic004G001300--Sobic001G098301 Sobic003G003600 Sobic003G003600 Sobic004G001300--Sobic003G003600 Sobic004G001300--Sobic003G137100 Sobic004G001300--Sobic001G060401 Sobic007G204900--Sobic004G001300 Sobic007G204900--Sobic007G213700 Sobic008G011200 Sobic008G011200 Sobic007G204900--Sobic008G011200 Sobic003G305000 Sobic003G305000 Sobic007G204900--Sobic003G305000 Sobic010G096300 Sobic010G096300 Sobic007G204900--Sobic010G096300 Sobic003G068800 Sobic003G068800 Sobic007G204900--Sobic003G068800 Sobic007G204900--Sobic006G249050 Sobic001G065600 Sobic001G065600 Sobic007G204900--Sobic001G065600 Sobic007G204900--Sobic001G098301 Sobic007G213700--Sobic007G204900 Sobic007G213700--Sobic002G000700 Sobic007G213700--Sobic003G305000 Sobic004G201700 Sobic004G201700 Sobic007G213700--Sobic004G201700 Sobic007G213700--Sobic006G249050 Sobic007G213700--Sobic004G122200 Sobic001G003200 Sobic001G003200 Sobic007G213700--Sobic001G003200 Sobic006G135100 Sobic006G135100 Sobic007G213700--Sobic006G135100 Sobic001G158900 Sobic001G158900 Sobic007G213700--Sobic001G158900 Sobic010G056200 Sobic010G056200 Sobic007G052900--Sobic010G056200 Sobic004G113800 Sobic004G113800 Sobic007G052900--Sobic004G113800 Sobic002G209600 Sobic002G209600 Sobic007G052900--Sobic002G209600 Sobic010G005600 Sobic010G005600 Sobic007G052900--Sobic010G005600 Sobic004G083700 Sobic004G083700 Sobic007G052900--Sobic004G083700 Sobic007G054000 Sobic007G054000 Sobic007G052900--Sobic007G054000 Sobic010G280100 Sobic010G280100 Sobic007G052900--Sobic010G280100 Sobic007G052900--Sobic006G180432 Sobic009G065100 Sobic009G065100 Sobic007G052900--Sobic009G065100 Sobic008G183200--Sobic004G122200 Sobic010G241300 Sobic010G241300 Sobic008G183200--Sobic010G241300 Sobic005G127000 Sobic005G127000 Sobic008G183200--Sobic005G127000 Sobic005G111500 Sobic005G111500 Sobic008G183200--Sobic005G111500 Sobic007G059500 Sobic007G059500 Sobic008G183200--Sobic007G059500 Sobic008G183200--Sobic003G110700 Sobic001G377500 Sobic001G377500 Sobic008G183200--Sobic001G377500 Sobic008G183200--Sobic010G164200 Sobic008G183200--Sobic006G102400 Sobic004G122200--Sobic008G183200 Sobic004G122200--Sobic005G127000 Sobic004G122200--Sobic010G241300 Sobic008G066100 Sobic008G066100 Sobic004G122200--Sobic008G066100 Sobic004G122200--Sobic010G164200 Sobic008G015100 Sobic008G015100 Sobic004G122200--Sobic008G015100 Sobic001G068301 Sobic001G068301 Sobic004G122200--Sobic001G068301 Sobic001G338700 Sobic001G338700 Sobic004G122200--Sobic001G338700 Sobic004G122200--Sobic001G377500
Octagon: transcription factors


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