Gene annotation
Transcriptome id Sobic.002G000700.1
Synonym Sb02g000250
Functional annotation expressed protein
UniProt C5X6I8
Pfam -
Panther DB PTHR36741 PTHR36741:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39950 : -
RAP-DB (Rice) LOC_Os07g01060.1 : expressed protein
MaizeGDB (Corn) Zm00025a044815
Brachypodium KQK21270 , KQK21269 , PNT77239
Barley HORVU2Hr1G065100.8 , HORVU2Hr1G065100.9 , HORVU2Hr1G065100.4 , HORVU2Hr1G065100.5 , HORVU2Hr1G065100.6 , HORVU2Hr1G065100.7 , HORVU2Hr1G065100.1 , HORVU2Hr1G065100.2 , HORVU2Hr1G065100.3 , HORVU2Hr1G065100.14 , HORVU2Hr1G065100.13 , HORVU2Hr1G065100.10 , HORVU2Hr1G065100.11
Wheat TraesCS2D02G267600 , TraesCS2D02G267600 , TraesCS2B02G287400 , TraesCS2B02G287400 , TraesCS2B02G287400 , TraesCS2A02G268600 , TraesCS2D02G267600 , TraesCS2A02G268600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G137100 protoporphyrinogen oxidase, chloroplast precursor, putative, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
2 Sobic.002G358500 - -
3 Sobic.007G213700 -(PubMedID : 26976818)@aminotransferase, putative, expressed K00830: alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase
4 Sobic.004G001300 -(PubMedID : 26976818)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15893: glycerate dehydrogenase
5 Sobic.006G249050 - -
6 Sobic.001G060401 - -
7 Sobic.007G204900 extracellular ligand-gated ion channel, putative, expressed -
8 Sobic.010G164200 osFTL12 FT-Like12 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
9 Sobic.007G150100 HD domain containing protein, putative, expressed -
10 Sobic.005G111200 PB1 domain containing protein, expressed -
11 Sobic.005G063700 OsFBW2 - F-box domain and WD40 repeat containing protein, expressed -
12 Sobic.010G005600 SEC14 cytosolic factor family protein, putative, expressed -
13 Sobic.010G049000 expressed protein -
14 Sobic.009G164300 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
15 Sobic.001G425400 high cyclic electron flow 1(PubMedID : 26465154)@"D-fructose-1,6-bisphosphate 1-phosphohydrolase (Os)"(PubMedID : 27208977)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
16 Sobic.004G122200 expressed protein -
17 Sobic.001G536800 peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
18 Sobic.001G098301 - -
19 Sobic.005G036100 phosphoglycerate mutase, putative, expressed K15634: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
20 Sobic.003G442700 - -


Gene co-expression network
sample Sobic002G000700 Sobic002G000700 Sobic003G137100 Sobic003G137100 Sobic002G000700--Sobic003G137100 Sobic002G358500 Sobic002G358500 Sobic002G000700--Sobic002G358500 Sobic007G213700 Sobic007G213700 Sobic002G000700--Sobic007G213700 Sobic004G001300 Sobic004G001300 Sobic002G000700--Sobic004G001300 Sobic006G249050 Sobic006G249050 Sobic002G000700--Sobic006G249050 Sobic001G060401 Sobic001G060401 Sobic002G000700--Sobic001G060401 Sobic007G204900 Sobic007G204900 Sobic002G000700--Sobic007G204900 Sobic010G164200 Sobic010G164200 Sobic002G000700--Sobic010G164200 Sobic007G150100 Sobic007G150100 Sobic002G000700--Sobic007G150100 Sobic001G536800 Sobic001G536800 Sobic003G137100--Sobic001G536800 Sobic009G085500 Sobic009G085500 Sobic003G137100--Sobic009G085500 Sobic001G069000 Sobic001G069000 Sobic003G137100--Sobic001G069000 Sobic001G495300 Sobic001G495300 Sobic003G137100--Sobic001G495300 Sobic006G010900 Sobic006G010900 Sobic003G137100--Sobic006G010900 Sobic003G412900 Sobic003G412900 Sobic003G137100--Sobic003G412900 Sobic001G233400 Sobic001G233400 Sobic003G137100--Sobic001G233400 Sobic003G137100--Sobic002G000700 Sobic006G103400 Sobic006G103400 Sobic003G137100--Sobic006G103400 Sobic009G191100 Sobic009G191100 Sobic002G358500--Sobic009G191100 Sobic004G359700 Sobic004G359700 Sobic002G358500--Sobic004G359700 Sobic002G121600 Sobic002G121600 Sobic002G358500--Sobic002G121600 Sobic007G113800 Sobic007G113800 Sobic002G358500--Sobic007G113800 Sobic002G358500--Sobic002G000700 Sobic002G358500--Sobic001G060401 Sobic004G112600 Sobic004G112600 Sobic002G358500--Sobic004G112600 Sobic001G468700 Sobic001G468700 Sobic002G358500--Sobic001G468700 Sobic002G343901 Sobic002G343901 Sobic002G358500--Sobic002G343901 Sobic007G213700--Sobic007G204900 Sobic007G213700--Sobic002G000700 Sobic003G305000 Sobic003G305000 Sobic007G213700--Sobic003G305000 Sobic004G201700 Sobic004G201700 Sobic007G213700--Sobic004G201700 Sobic007G213700--Sobic006G249050 Sobic004G122200 Sobic004G122200 Sobic007G213700--Sobic004G122200 Sobic001G003200 Sobic001G003200 Sobic007G213700--Sobic001G003200 Sobic006G135100 Sobic006G135100 Sobic007G213700--Sobic006G135100 Sobic001G158900 Sobic001G158900 Sobic007G213700--Sobic001G158900 Sobic001G118100 Sobic001G118100 Sobic004G001300--Sobic001G118100 Sobic004G001300--Sobic007G204900 Sobic008G001000 Sobic008G001000 Sobic004G001300--Sobic008G001000 Sobic003G442700 Sobic003G442700 Sobic004G001300--Sobic003G442700 Sobic003G161000 Sobic003G161000 Sobic004G001300--Sobic003G161000 Sobic001G098301 Sobic001G098301 Sobic004G001300--Sobic001G098301 Sobic003G003600 Sobic003G003600 Sobic004G001300--Sobic003G003600 Sobic004G001300--Sobic003G137100 Sobic004G001300--Sobic001G060401 Sobic005G036600 Sobic005G036600 Sobic006G249050--Sobic005G036600 Sobic001G217700 Sobic001G217700 Sobic006G249050--Sobic001G217700 Sobic006G249050--Sobic002G000700 Sobic006G249050--Sobic004G001300 Sobic006G249050--Sobic007G204900 Sobic006G249050--Sobic007G213700 Sobic007G052900 Sobic007G052900 Sobic006G249050--Sobic007G052900 Sobic008G183200 Sobic008G183200 Sobic006G249050--Sobic008G183200 Sobic006G249050--Sobic004G122200 Sobic001G060401--Sobic003G442700 Sobic001G060401--Sobic004G001300 Sobic001G060401--Sobic002G358500 Sobic002G347600 Sobic002G347600 Sobic001G060401--Sobic002G347600 Sobic001G060401--Sobic002G000700 Sobic001G060401--Sobic001G098301 Sobic001G060401--Sobic009G191100 Sobic001G048400 Sobic001G048400 Sobic001G060401--Sobic001G048400 Sobic001G060401--Sobic001G468700 Sobic007G204900--Sobic004G001300 Sobic007G204900--Sobic007G213700 Sobic008G011200 Sobic008G011200 Sobic007G204900--Sobic008G011200 Sobic007G204900--Sobic003G305000 Sobic010G096300 Sobic010G096300 Sobic007G204900--Sobic010G096300 Sobic003G068800 Sobic003G068800 Sobic007G204900--Sobic003G068800 Sobic007G204900--Sobic006G249050 Sobic001G065600 Sobic001G065600 Sobic007G204900--Sobic001G065600 Sobic007G204900--Sobic001G098301 Sobic006G102400 Sobic006G102400 Sobic010G164200--Sobic006G102400 Sobic010G164200--Sobic004G122200 Sobic005G111200 Sobic005G111200 Sobic010G164200--Sobic005G111200 Sobic010G164200--Sobic008G183200 Sobic010G164200--Sobic002G000700 Sobic006G160400 Sobic006G160400 Sobic010G164200--Sobic006G160400 Sobic010G107400 Sobic010G107400 Sobic010G164200--Sobic010G107400 Sobic010G164200--Sobic006G249050 Sobic010G164200--Sobic004G001300 Sobic007G150100--Sobic001G003200 Sobic006G173600 Sobic006G173600 Sobic007G150100--Sobic006G173600 Sobic007G150100--Sobic001G048400 Sobic001G504400 Sobic001G504400 Sobic007G150100--Sobic001G504400 Sobic010G043800 Sobic010G043800 Sobic007G150100--Sobic010G043800 Sobic009G056700 Sobic009G056700 Sobic007G150100--Sobic009G056700 Sobic001G169900 Sobic001G169900 Sobic007G150100--Sobic001G169900 Sobic003G398800 Sobic003G398800 Sobic007G150100--Sobic003G398800 Sobic003G110800 Sobic003G110800 Sobic007G150100--Sobic003G110800
Octagon: transcription factors


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