Gene annotation
Transcriptome id Sobic.008G016250.1
Synonym -
Functional annotation -
UniProt A0A1Z5R4J4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G035601 - -
2 Sobic.005G111200 PB1 domain containing protein, expressed -
3 Sobic.003G404900 regulatory protein, putative, expressed -
4 Sobic.006G051300 expressed protein -
5 Sobic.001G463200 BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
6 Sobic.004G026700 down-regulated TF in developmental senescence(PubMedID : 27586543)@transcription factor, putative, expressed K09060: plant G-box-binding factor
7 Sobic.003G163700 Glutaredoxin family protein (Os)(PubMedID : 27208977)@expressed protein K03676: grxC, GLRX, glutaredoxin 3
8 Sobic.010G108401 - -
9 Sobic.001G184100 Osmotic stress potassium transporter(PubMedID : 28620409)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
10 Sobic.004G272600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.010G183032 - -
12 Sobic.008G038300 uncharacterized protein ycf53, putative, expressed -
13 Sobic.010G164200 osFTL12 FT-Like12 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
14 Sobic.002G000500 isoflavone reductase, putative, expressed -
15 Sobic.001G274600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.001G233400 Citrate transporter protein, putative, expressed -
17 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
18 Sobic.003G069000 transferase family protein, putative, expressed -
19 Sobic.001G344600 late embryogenesis abundant protein, putative, expressed -
20 Sobic.004G035700 - -


Gene co-expression network
sample Sobic008G016250 Sobic008G016250 Sobic004G035601 Sobic004G035601 Sobic008G016250--Sobic004G035601 Sobic005G111200 Sobic005G111200 Sobic008G016250--Sobic005G111200 Sobic003G404900 Sobic003G404900 Sobic008G016250--Sobic003G404900 Sobic006G051300 Sobic006G051300 Sobic008G016250--Sobic006G051300 Sobic001G463200 Sobic001G463200 Sobic008G016250--Sobic001G463200 Sobic004G026700 Sobic004G026700 Sobic008G016250--Sobic004G026700 Sobic003G163700 Sobic003G163700 Sobic008G016250--Sobic003G163700 Sobic010G108401 Sobic010G108401 Sobic008G016250--Sobic010G108401 Sobic001G184100 Sobic001G184100 Sobic008G016250--Sobic001G184100 Sobic004G035601--Sobic006G051300 Sobic003G199800 Sobic003G199800 Sobic004G035601--Sobic003G199800 Sobic004G035601--Sobic008G016250 Sobic004G035700 Sobic004G035700 Sobic004G035601--Sobic004G035700 Sobic004G035601--Sobic004G026700 Sobic002G000500 Sobic002G000500 Sobic004G035601--Sobic002G000500 Sobic010G183100 Sobic010G183100 Sobic004G035601--Sobic010G183100 Sobic002G040100 Sobic002G040100 Sobic004G035601--Sobic002G040100 Sobic008G038300 Sobic008G038300 Sobic004G035601--Sobic008G038300 Sobic005G111200--Sobic003G163700 Sobic008G015100 Sobic008G015100 Sobic005G111200--Sobic008G015100 Sobic005G111200--Sobic001G463200 Sobic004G272600 Sobic004G272600 Sobic005G111200--Sobic004G272600 Sobic010G164200 Sobic010G164200 Sobic005G111200--Sobic010G164200 Sobic009G171300 Sobic009G171300 Sobic005G111200--Sobic009G171300 Sobic005G111200--Sobic008G016250 Sobic001G425400 Sobic001G425400 Sobic005G111200--Sobic001G425400 Sobic005G099700 Sobic005G099700 Sobic005G111200--Sobic005G099700 Sobic003G404900--Sobic002G000500 Sobic001G361700 Sobic001G361700 Sobic003G404900--Sobic001G361700 Sobic003G404900--Sobic004G035601 Sobic003G404900--Sobic006G051300 Sobic003G404900--Sobic008G016250 Sobic003G404900--Sobic010G108401 Sobic003G404900--Sobic004G026700 Sobic010G183032 Sobic010G183032 Sobic003G404900--Sobic010G183032 Sobic007G171600 Sobic007G171600 Sobic003G404900--Sobic007G171600 Sobic006G051300--Sobic004G035601 Sobic008G104601 Sobic008G104601 Sobic006G051300--Sobic008G104601 Sobic001G344600 Sobic001G344600 Sobic006G051300--Sobic001G344600 Sobic006G051300--Sobic010G183100 Sobic006G051300--Sobic001G463200 Sobic006G051300--Sobic003G199800 Sobic001G520800 Sobic001G520800 Sobic006G051300--Sobic001G520800 Sobic006G051300--Sobic004G026700 Sobic003G069000 Sobic003G069000 Sobic006G051300--Sobic003G069000 Sobic001G463200--Sobic004G272600 Sobic008G026800 Sobic008G026800 Sobic001G463200--Sobic008G026800 Sobic001G463200--Sobic004G035601 Sobic002G064000 Sobic002G064000 Sobic001G463200--Sobic002G064000 Sobic006G147300 Sobic006G147300 Sobic001G463200--Sobic006G147300 Sobic001G463200--Sobic006G051300 Sobic001G463200--Sobic005G111200 Sobic001G463200--Sobic008G015100 Sobic008G053200 Sobic008G053200 Sobic001G463200--Sobic008G053200 Sobic004G026700--Sobic002G000500 Sobic001G274600 Sobic001G274600 Sobic004G026700--Sobic001G274600 Sobic004G026700--Sobic001G361700 Sobic004G026700--Sobic002G040100 Sobic006G011100 Sobic006G011100 Sobic004G026700--Sobic006G011100 Sobic004G026700--Sobic003G199800 Sobic004G026700--Sobic004G035601 Sobic003G209800 Sobic003G209800 Sobic004G026700--Sobic003G209800 Sobic001G338700 Sobic001G338700 Sobic004G026700--Sobic001G338700 Sobic003G163700--Sobic005G099700 Sobic001G435500 Sobic001G435500 Sobic003G163700--Sobic001G435500 Sobic003G163700--Sobic005G111200 Sobic008G117300 Sobic008G117300 Sobic003G163700--Sobic008G117300 Sobic003G163700--Sobic008G015100 Sobic003G163700--Sobic009G171300 Sobic003G163700--Sobic004G272600 Sobic001G066600 Sobic001G066600 Sobic003G163700--Sobic001G066600 Sobic005G204000 Sobic005G204000 Sobic003G163700--Sobic005G204000 Sobic010G108401--Sobic010G183032 Sobic010G108401--Sobic008G038300 Sobic010G108401--Sobic004G035700 Sobic010G108401--Sobic001G274600 Sobic001G297400 Sobic001G297400 Sobic010G108401--Sobic001G297400 Sobic010G108401--Sobic002G040100 Sobic001G068400 Sobic001G068400 Sobic010G108401--Sobic001G068400 Sobic010G108401--Sobic010G183100 Sobic010G108401--Sobic002G000500 Sobic001G184100--Sobic010G108401 Sobic001G184100--Sobic004G026700 Sobic001G184100--Sobic010G183032 Sobic001G184100--Sobic001G274600 Sobic008G079400 Sobic008G079400 Sobic001G184100--Sobic008G079400 Sobic004G071800 Sobic004G071800 Sobic001G184100--Sobic004G071800 Sobic001G184100--Sobic004G272600 Sobic001G184100--Sobic002G000500 Sobic001G184100--Sobic003G404900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.