Gene annotation
Transcriptome id Sobic.006G051300.1
Synonym Sb06g013820
Functional annotation expressed protein
UniProt C5YES3
Pfam PF11820
Panther DB PTHR33128 PTHR33128:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G27030 : -
RAP-DB (Rice) LOC_Os04g31870.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQJ82275
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G035601 - -
2 Sobic.008G104601 - -
3 Sobic.001G344600 late embryogenesis abundant protein, putative, expressed -
4 Sobic.010G183100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@agenet domain containing protein, putative, expressed -
5 Sobic.001G463200 BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
6 Sobic.003G199800 expressed protein -
7 Sobic.001G520800 expressed protein -
8 Sobic.004G026700 down-regulated TF in developmental senescence(PubMedID : 27586543)@transcription factor, putative, expressed K09060: plant G-box-binding factor
9 Sobic.003G069000 transferase family protein, putative, expressed -
10 Sobic.003G404900 regulatory protein, putative, expressed -
11 Sobic.004G035700 - -
12 Sobic.010G038500 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.004G122200 expressed protein -
14 Sobic.002G040100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
15 Sobic.008G016250 - -
16 Sobic.008G081200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
17 Sobic.002G233300 Cupredoxin superfamily protein(PubMedID : 26465154)@plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.007G034300 expressed protein -
19 Sobic.001G338700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
20 Sobic.006G134400 protein FAM133, putative, expressed -


Gene co-expression network
sample Sobic006G051300 Sobic006G051300 Sobic004G035601 Sobic004G035601 Sobic006G051300--Sobic004G035601 Sobic008G104601 Sobic008G104601 Sobic006G051300--Sobic008G104601 Sobic001G344600 Sobic001G344600 Sobic006G051300--Sobic001G344600 Sobic010G183100 Sobic010G183100 Sobic006G051300--Sobic010G183100 Sobic001G463200 Sobic001G463200 Sobic006G051300--Sobic001G463200 Sobic003G199800 Sobic003G199800 Sobic006G051300--Sobic003G199800 Sobic001G520800 Sobic001G520800 Sobic006G051300--Sobic001G520800 Sobic004G026700 Sobic004G026700 Sobic006G051300--Sobic004G026700 Sobic003G069000 Sobic003G069000 Sobic006G051300--Sobic003G069000 Sobic004G035601--Sobic006G051300 Sobic004G035601--Sobic003G199800 Sobic008G016250 Sobic008G016250 Sobic004G035601--Sobic008G016250 Sobic004G035700 Sobic004G035700 Sobic004G035601--Sobic004G035700 Sobic004G035601--Sobic004G026700 Sobic002G000500 Sobic002G000500 Sobic004G035601--Sobic002G000500 Sobic004G035601--Sobic010G183100 Sobic002G040100 Sobic002G040100 Sobic004G035601--Sobic002G040100 Sobic008G038300 Sobic008G038300 Sobic004G035601--Sobic008G038300 Sobic006G244000 Sobic006G244000 Sobic008G104601--Sobic006G244000 Sobic007G034300 Sobic007G034300 Sobic008G104601--Sobic007G034300 Sobic008G104601--Sobic001G520800 Sobic001G329400 Sobic001G329400 Sobic008G104601--Sobic001G329400 Sobic003G431900 Sobic003G431900 Sobic008G104601--Sobic003G431900 Sobic003G256700 Sobic003G256700 Sobic008G104601--Sobic003G256700 Sobic004G125700 Sobic004G125700 Sobic008G104601--Sobic004G125700 Sobic008G104601--Sobic006G051300 Sobic009G104800 Sobic009G104800 Sobic008G104601--Sobic009G104800 Sobic001G338700 Sobic001G338700 Sobic001G344600--Sobic001G338700 Sobic001G344600--Sobic002G040100 Sobic002G233300 Sobic002G233300 Sobic001G344600--Sobic002G233300 Sobic010G038500 Sobic010G038500 Sobic001G344600--Sobic010G038500 Sobic010G183032 Sobic010G183032 Sobic001G344600--Sobic010G183032 Sobic001G344600--Sobic008G038300 Sobic010G108401 Sobic010G108401 Sobic001G344600--Sobic010G108401 Sobic001G344600--Sobic003G199800 Sobic001G344600--Sobic004G026700 Sobic010G183100--Sobic004G035700 Sobic007G189700 Sobic007G189700 Sobic010G183100--Sobic007G189700 Sobic008G081200 Sobic008G081200 Sobic010G183100--Sobic008G081200 Sobic001G068400 Sobic001G068400 Sobic010G183100--Sobic001G068400 Sobic010G183100--Sobic003G199800 Sobic010G183100--Sobic010G038500 Sobic010G183100--Sobic002G040100 Sobic009G254600 Sobic009G254600 Sobic010G183100--Sobic009G254600 Sobic009G222200 Sobic009G222200 Sobic010G183100--Sobic009G222200 Sobic004G272600 Sobic004G272600 Sobic001G463200--Sobic004G272600 Sobic008G026800 Sobic008G026800 Sobic001G463200--Sobic008G026800 Sobic001G463200--Sobic004G035601 Sobic002G064000 Sobic002G064000 Sobic001G463200--Sobic002G064000 Sobic006G147300 Sobic006G147300 Sobic001G463200--Sobic006G147300 Sobic001G463200--Sobic006G051300 Sobic005G111200 Sobic005G111200 Sobic001G463200--Sobic005G111200 Sobic008G015100 Sobic008G015100 Sobic001G463200--Sobic008G015100 Sobic008G053200 Sobic008G053200 Sobic001G463200--Sobic008G053200 Sobic003G199800--Sobic002G040100 Sobic010G276400 Sobic010G276400 Sobic003G199800--Sobic010G276400 Sobic003G199800--Sobic002G000500 Sobic003G199800--Sobic010G183100 Sobic004G035500 Sobic004G035500 Sobic003G199800--Sobic004G035500 Sobic003G199800--Sobic008G038300 Sobic010G109500 Sobic010G109500 Sobic003G199800--Sobic010G109500 Sobic003G199800--Sobic007G189700 Sobic009G191300 Sobic009G191300 Sobic003G199800--Sobic009G191300 Sobic001G520800--Sobic007G034300 Sobic005G039600 Sobic005G039600 Sobic001G520800--Sobic005G039600 Sobic001G520800--Sobic003G199800 Sobic001G520800--Sobic008G104601 Sobic003G231800 Sobic003G231800 Sobic001G520800--Sobic003G231800 Sobic001G520800--Sobic002G233300 Sobic009G244300 Sobic009G244300 Sobic001G520800--Sobic009G244300 Sobic001G520800--Sobic007G189700 Sobic001G520800--Sobic003G431900 Sobic004G026700--Sobic002G000500 Sobic001G274600 Sobic001G274600 Sobic004G026700--Sobic001G274600 Sobic001G361700 Sobic001G361700 Sobic004G026700--Sobic001G361700 Sobic004G026700--Sobic002G040100 Sobic006G011100 Sobic006G011100 Sobic004G026700--Sobic006G011100 Sobic004G026700--Sobic003G199800 Sobic004G026700--Sobic004G035601 Sobic003G209800 Sobic003G209800 Sobic004G026700--Sobic003G209800 Sobic004G026700--Sobic001G338700 Sobic003G069000--Sobic010G183100 Sobic007G171600 Sobic007G171600 Sobic003G069000--Sobic007G171600 Sobic003G069000--Sobic004G035700 Sobic003G069000--Sobic006G051300 Sobic003G069100 Sobic003G069100 Sobic003G069000--Sobic003G069100 Sobic003G069000--Sobic008G081200 Sobic003G342300 Sobic003G342300 Sobic003G069000--Sobic003G342300 Sobic003G069000--Sobic002G000500 Sobic006G134400 Sobic006G134400 Sobic003G069000--Sobic006G134400
Octagon: transcription factors


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