Gene annotation
Transcriptome id Sobic.010G107400.1
Synonym CER60, KCS5, Sb10g009410
Functional annotation 3-ketoacyl-CoA synthase, putative, expressed
UniProt C5Z823
Pfam PF08541 PF08392
Panther DB PTHR31561 PTHR31561:SF18
NCBI CDD -
KEGG Orthology K15397; 3-ketoacyl-CoA synthase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process GO:0016020membrane GO:0006633fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G25450 : 3-ketoacyl-CoA synthase 5
RAP-DB (Rice) LOC_Os06g15170.1 : 3-ketoacyl-CoA synthase, putative, expressed
MaizeGDB (Corn) Zm00025a036645 , Zm00025a020257 , Zm00025a042702 , Zm00025a044614 , Zm00025a044659 , Zm00025a032652 , Zm00025a001341 , Zm00025a021922 , Zm00025a050385 , Zm00025a028880
Brachypodium PNT75706 , KQK04750 , KQK18680 , PNT76138 , KQK01599 , KQK16807 , KQK17805 , KQK23503
Barley HORVU6Hr1G073300.1 , HORVU6Hr1G004830.1 , HORVU3Hr1G054510.1 , HORVU6Hr1G036950.11 , HORVU6Hr1G036950.10 , HORVU1Hr1G086760.1 , HORVU6Hr1G036950.7 , HORVU6Hr1G036950.5 , HORVU6Hr1G036950.4 , HORVU6Hr1G036950.8 , HORVU7Hr1G042070.2 , HORVU7Hr1G042070.3 , HORVU7Hr1G042070.1 , HORVU4Hr1G072960.1 , HORVU7Hr1G084610.10 , HORVU7Hr1G084610.11 , HORVU7Hr1G084610.1 , HORVU7Hr1G084610.2 , HORVU7Hr1G084610.3 , HORVU7Hr1G084610.4 , HORVU7Hr1G084610.5 , HORVU7Hr1G084610.6 , HORVU7Hr1G084610.7 , HORVU7Hr1G084610.8 , HORVU7Hr1G084610.9 , HORVU7Hr1G006910.1 , HORVU7Hr1G006910.2 , HORVU6Hr1G036950.9 , HORVU1Hr1G086360.1 , HORVU1Hr1G086360.2 , HORVU1Hr1G086360.3
Wheat TraesCS7B02G449000 , TraesCS1D02G374700 , TraesCS1B02G387800 , TraesCS1B02G387800 , TraesCS1A02G369100 , TraesCS7D02G035700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G183200 LOL3, putative, expressed -
2 Sobic.010G164200 osFTL12 FT-Like12 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
3 Sobic.004G122200 expressed protein -
4 Sobic.003G068800 Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
5 Sobic.003G110700 nuclear transport factor, putative, expressed -
6 Sobic.001G377500 POEI47 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
7 Sobic.006G102400 transporter family protein, putative, expressed -
8 Sobic.010G225600 - -
9 Sobic.009G085500 hydrolase, alpha/beta fold family protein, putative, expressed -
10 Sobic.005G111200 PB1 domain containing protein, expressed -
11 Sobic.008G015100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
12 Sobic.003G305000 Unnamed(PubMedID : 24676859)@CIN-like (ClassII) Subclade 9 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
13 Sobic.003G163700 Glutaredoxin family protein (Os)(PubMedID : 27208977)@expressed protein K03676: grxC, GLRX, glutaredoxin 3
14 Sobic.005G111500 FHA domain containing protein, putative, expressed -
15 Sobic.001G217700 possible lysine decarboxylase domain containing protein, expressed -
16 Sobic.006G249050 - -
17 Sobic.010G241300 -(PubMedID : 26465154)@OsCML29 - Calmodulin-related calcium sensor protein, expressed -
18 Sobic.001G463200 BTBN5 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
19 Sobic.002G327800 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
20 Sobic.008G066100 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed -


Gene co-expression network
sample Sobic010G107400 Sobic010G107400 Sobic008G183200 Sobic008G183200 Sobic010G107400--Sobic008G183200 Sobic010G164200 Sobic010G164200 Sobic010G107400--Sobic010G164200 Sobic004G122200 Sobic004G122200 Sobic010G107400--Sobic004G122200 Sobic003G068800 Sobic003G068800 Sobic010G107400--Sobic003G068800 Sobic003G110700 Sobic003G110700 Sobic010G107400--Sobic003G110700 Sobic001G377500 Sobic001G377500 Sobic010G107400--Sobic001G377500 Sobic006G102400 Sobic006G102400 Sobic010G107400--Sobic006G102400 Sobic010G225600 Sobic010G225600 Sobic010G107400--Sobic010G225600 Sobic009G085500 Sobic009G085500 Sobic010G107400--Sobic009G085500 Sobic008G183200--Sobic004G122200 Sobic010G241300 Sobic010G241300 Sobic008G183200--Sobic010G241300 Sobic005G127000 Sobic005G127000 Sobic008G183200--Sobic005G127000 Sobic005G111500 Sobic005G111500 Sobic008G183200--Sobic005G111500 Sobic007G059500 Sobic007G059500 Sobic008G183200--Sobic007G059500 Sobic008G183200--Sobic003G110700 Sobic008G183200--Sobic001G377500 Sobic008G183200--Sobic010G164200 Sobic008G183200--Sobic006G102400 Sobic010G164200--Sobic006G102400 Sobic010G164200--Sobic004G122200 Sobic005G111200 Sobic005G111200 Sobic010G164200--Sobic005G111200 Sobic010G164200--Sobic008G183200 Sobic002G000700 Sobic002G000700 Sobic010G164200--Sobic002G000700 Sobic006G160400 Sobic006G160400 Sobic010G164200--Sobic006G160400 Sobic010G164200--Sobic010G107400 Sobic006G249050 Sobic006G249050 Sobic010G164200--Sobic006G249050 Sobic004G001300 Sobic004G001300 Sobic010G164200--Sobic004G001300 Sobic004G122200--Sobic008G183200 Sobic004G122200--Sobic005G127000 Sobic004G122200--Sobic010G241300 Sobic008G066100 Sobic008G066100 Sobic004G122200--Sobic008G066100 Sobic004G122200--Sobic010G164200 Sobic008G015100 Sobic008G015100 Sobic004G122200--Sobic008G015100 Sobic001G068301 Sobic001G068301 Sobic004G122200--Sobic001G068301 Sobic001G338700 Sobic001G338700 Sobic004G122200--Sobic001G338700 Sobic004G122200--Sobic001G377500 Sobic003G108600 Sobic003G108600 Sobic003G068800--Sobic003G108600 Sobic001G102300 Sobic001G102300 Sobic003G068800--Sobic001G102300 Sobic003G068800--Sobic001G377500 Sobic001G158900 Sobic001G158900 Sobic003G068800--Sobic001G158900 Sobic001G065600 Sobic001G065600 Sobic003G068800--Sobic001G065600 Sobic002G359600 Sobic002G359600 Sobic003G068800--Sobic002G359600 Sobic005G188600 Sobic005G188600 Sobic003G068800--Sobic005G188600 Sobic001G098301 Sobic001G098301 Sobic003G068800--Sobic001G098301 Sobic007G204900 Sobic007G204900 Sobic003G068800--Sobic007G204900 Sobic003G305000 Sobic003G305000 Sobic003G110700--Sobic003G305000 Sobic008G062500 Sobic008G062500 Sobic003G110700--Sobic008G062500 Sobic003G137100 Sobic003G137100 Sobic003G110700--Sobic003G137100 Sobic002G114700 Sobic002G114700 Sobic003G110700--Sobic002G114700 Sobic009G055800 Sobic009G055800 Sobic003G110700--Sobic009G055800 Sobic003G110700--Sobic008G183200 Sobic003G110700--Sobic004G001300 Sobic002G104000 Sobic002G104000 Sobic003G110700--Sobic002G104000 Sobic004G186200 Sobic004G186200 Sobic003G110700--Sobic004G186200 Sobic001G377500--Sobic005G127000 Sobic002G001800 Sobic002G001800 Sobic001G377500--Sobic002G001800 Sobic001G377500--Sobic008G183200 Sobic001G377500--Sobic003G068800 Sobic001G377500--Sobic007G059500 Sobic001G377500--Sobic004G122200 Sobic001G377500--Sobic010G241300 Sobic010G218600 Sobic010G218600 Sobic001G377500--Sobic010G218600 Sobic001G377500--Sobic010G225600 Sobic006G102400--Sobic010G164200 Sobic006G102400--Sobic008G183200 Sobic006G102400--Sobic004G122200 Sobic006G102400--Sobic010G241300 Sobic001G217700 Sobic001G217700 Sobic006G102400--Sobic001G217700 Sobic006G051300 Sobic006G051300 Sobic006G102400--Sobic006G051300 Sobic006G102400--Sobic006G249050 Sobic003G052300 Sobic003G052300 Sobic006G102400--Sobic003G052300 Sobic003G397200 Sobic003G397200 Sobic006G102400--Sobic003G397200 Sobic009G202400 Sobic009G202400 Sobic010G225600--Sobic009G202400 Sobic010G225600--Sobic003G108600 Sobic005G097800 Sobic005G097800 Sobic010G225600--Sobic005G097800 Sobic006G135100 Sobic006G135100 Sobic010G225600--Sobic006G135100 Sobic010G225600--Sobic005G127000 Sobic010G225600--Sobic001G068301 Sobic001G317400 Sobic001G317400 Sobic010G225600--Sobic001G317400 Sobic001G391900 Sobic001G391900 Sobic010G225600--Sobic001G391900 Sobic010G225600--Sobic003G068800 Sobic001G536800 Sobic001G536800 Sobic009G085500--Sobic001G536800 Sobic009G085500--Sobic003G137100 Sobic009G085500--Sobic008G066100 Sobic001G069000 Sobic001G069000 Sobic009G085500--Sobic001G069000 Sobic002G098800 Sobic002G098800 Sobic009G085500--Sobic002G098800 Sobic006G103400 Sobic006G103400 Sobic009G085500--Sobic006G103400 Sobic006G010900 Sobic006G010900 Sobic009G085500--Sobic006G010900 Sobic003G412900 Sobic003G412900 Sobic009G085500--Sobic003G412900 Sobic002G036000 Sobic002G036000 Sobic009G085500--Sobic002G036000
Octagon: transcription factors


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