Gene annotation
Transcriptome id Sobic.008G104801.1
Synonym -
Functional annotation -
UniProt A0A1Z5R6V3
Pfam PF04578 PF13968
Panther DB PTHR31325 PTHR31325:SF37
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45530 : Protein of unknown function (DUF594)
RAP-DB (Rice) LOC_Os07g26560.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS6A02G035300 , TraesCS6D02G041000 , TraesCS6A02G035500 , TraesCS1B02G022600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G233400 Citrate transporter protein, putative, expressed -
2 Sobic.006G060200 basic proline-rich protein, putative, expressed -
3 Sobic.001G217700 possible lysine decarboxylase domain containing protein, expressed -
4 Sobic.005G084000 expressed protein -
5 Sobic.003G137100 protoporphyrinogen oxidase, chloroplast precursor, putative, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
6 Sobic.006G103400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.004G023200 Polyketide cyclase/dehydrase and lipid transport superfamily protein(PubMedID : 26465154)@membrane related protein CP5, putative, expressed -
8 Sobic.002G289400 serine/threonine-protein kinase receptor precursor, putative, expressed -
9 Sobic.002G301700 amidase, putative, expressed K01426: E3.5.1.4, amidase
10 Sobic.001G495300 expressed protein -
11 Sobic.002G215000 chlorophyll A-B binding protein, putative, expressed K08908: light-harvesting complex I chlorophyll a/b binding protein 2
12 Sobic.006G102400 transporter family protein, putative, expressed -
13 Sobic.007G213300 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
14 Sobic.007G171600 Ser/Thr protein phosphatase family protein, putative, expressed K01517: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
15 Sobic.010G096300 -(PubMedID : 22968911)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GLK genes are members of the GARP superfamily and functions in a BS or M cell-type specific manner to regulate the proplastid to chloroplast transition(PubMedID : 22968911)@myb-like DNA-binding domain containing protein, expressed -
16 Sobic.001G269300 OsFBD15 - F-box and FBD domain containing protein, expressed -
17 Sobic.001G338700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
18 Sobic.001G420300 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
19 Sobic.002G385700 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
20 Sobic.010G241300 -(PubMedID : 26465154)@OsCML29 - Calmodulin-related calcium sensor protein, expressed -


Gene co-expression network
sample Sobic008G104801 Sobic008G104801 Sobic001G233400 Sobic001G233400 Sobic008G104801--Sobic001G233400 Sobic006G060200 Sobic006G060200 Sobic008G104801--Sobic006G060200 Sobic001G217700 Sobic001G217700 Sobic008G104801--Sobic001G217700 Sobic005G084000 Sobic005G084000 Sobic008G104801--Sobic005G084000 Sobic003G137100 Sobic003G137100 Sobic008G104801--Sobic003G137100 Sobic006G103400 Sobic006G103400 Sobic008G104801--Sobic006G103400 Sobic004G023200 Sobic004G023200 Sobic008G104801--Sobic004G023200 Sobic002G289400 Sobic002G289400 Sobic008G104801--Sobic002G289400 Sobic002G301700 Sobic002G301700 Sobic008G104801--Sobic002G301700 Sobic001G233400--Sobic004G023200 Sobic001G233400--Sobic006G103400 Sobic001G536800 Sobic001G536800 Sobic001G233400--Sobic001G536800 Sobic001G233400--Sobic003G137100 Sobic002G385700 Sobic002G385700 Sobic001G233400--Sobic002G385700 Sobic009G196800 Sobic009G196800 Sobic001G233400--Sobic009G196800 Sobic001G069000 Sobic001G069000 Sobic001G233400--Sobic001G069000 Sobic010G096300 Sobic010G096300 Sobic001G233400--Sobic010G096300 Sobic001G233400--Sobic006G060200 Sobic001G269300 Sobic001G269300 Sobic006G060200--Sobic001G269300 Sobic002G215000 Sobic002G215000 Sobic006G060200--Sobic002G215000 Sobic006G060200--Sobic001G217700 Sobic008G131700 Sobic008G131700 Sobic006G060200--Sobic008G131700 Sobic006G060200--Sobic001G233400 Sobic005G036600 Sobic005G036600 Sobic006G060200--Sobic005G036600 Sobic006G060200--Sobic003G137100 Sobic001G495300 Sobic001G495300 Sobic006G060200--Sobic001G495300 Sobic006G060200--Sobic005G084000 Sobic001G217700--Sobic006G060200 Sobic002G104000 Sobic002G104000 Sobic001G217700--Sobic002G104000 Sobic006G249050 Sobic006G249050 Sobic001G217700--Sobic006G249050 Sobic002G376700 Sobic002G376700 Sobic001G217700--Sobic002G376700 Sobic003G110700 Sobic003G110700 Sobic001G217700--Sobic003G110700 Sobic001G217700--Sobic001G269300 Sobic006G102400 Sobic006G102400 Sobic001G217700--Sobic006G102400 Sobic001G217700--Sobic005G036600 Sobic010G246600 Sobic010G246600 Sobic001G217700--Sobic010G246600 Sobic005G084000--Sobic001G495300 Sobic007G210600 Sobic007G210600 Sobic005G084000--Sobic007G210600 Sobic005G084000--Sobic008G131700 Sobic001G142400 Sobic001G142400 Sobic005G084000--Sobic001G142400 Sobic003G074700 Sobic003G074700 Sobic005G084000--Sobic003G074700 Sobic004G143400 Sobic004G143400 Sobic005G084000--Sobic004G143400 Sobic009G083300 Sobic009G083300 Sobic005G084000--Sobic009G083300 Sobic007G201400 Sobic007G201400 Sobic005G084000--Sobic007G201400 Sobic003G069200 Sobic003G069200 Sobic005G084000--Sobic003G069200 Sobic003G137100--Sobic001G536800 Sobic009G085500 Sobic009G085500 Sobic003G137100--Sobic009G085500 Sobic003G137100--Sobic001G069000 Sobic003G137100--Sobic001G495300 Sobic006G010900 Sobic006G010900 Sobic003G137100--Sobic006G010900 Sobic003G412900 Sobic003G412900 Sobic003G137100--Sobic003G412900 Sobic003G137100--Sobic001G233400 Sobic002G000700 Sobic002G000700 Sobic003G137100--Sobic002G000700 Sobic003G137100--Sobic006G103400 Sobic004G343300 Sobic004G343300 Sobic006G103400--Sobic004G343300 Sobic006G103400--Sobic004G023200 Sobic004G175500 Sobic004G175500 Sobic006G103400--Sobic004G175500 Sobic003G197400 Sobic003G197400 Sobic006G103400--Sobic003G197400 Sobic002G033800 Sobic002G033800 Sobic006G103400--Sobic002G033800 Sobic004G249800 Sobic004G249800 Sobic006G103400--Sobic004G249800 Sobic001G041800 Sobic001G041800 Sobic006G103400--Sobic001G041800 Sobic010G241000 Sobic010G241000 Sobic006G103400--Sobic010G241000 Sobic004G235200 Sobic004G235200 Sobic006G103400--Sobic004G235200 Sobic004G023200--Sobic002G033800 Sobic004G023200--Sobic004G343300 Sobic004G023200--Sobic006G103400 Sobic001G448400 Sobic001G448400 Sobic004G023200--Sobic001G448400 Sobic004G023200--Sobic004G249800 Sobic006G234100 Sobic006G234100 Sobic004G023200--Sobic006G234100 Sobic010G109500 Sobic010G109500 Sobic004G023200--Sobic010G109500 Sobic003G132100 Sobic003G132100 Sobic004G023200--Sobic003G132100 Sobic004G035500 Sobic004G035500 Sobic004G023200--Sobic004G035500 Sobic002G289400--Sobic001G233400 Sobic002G289400--Sobic004G023200 Sobic002G289400--Sobic001G069000 Sobic002G289400--Sobic006G103400 Sobic002G289400--Sobic008G104801 Sobic002G289400--Sobic002G301700 Sobic002G289400--Sobic001G495300 Sobic002G289400--Sobic002G033800 Sobic010G241300 Sobic010G241300 Sobic002G289400--Sobic010G241300 Sobic002G301700--Sobic004G023200 Sobic002G301700--Sobic002G033800 Sobic010G019700 Sobic010G019700 Sobic002G301700--Sobic010G019700 Sobic002G301600 Sobic002G301600 Sobic002G301700--Sobic002G301600 Sobic001G379700 Sobic001G379700 Sobic002G301700--Sobic001G379700 Sobic001G308800 Sobic001G308800 Sobic002G301700--Sobic001G308800 Sobic001G527000 Sobic001G527000 Sobic002G301700--Sobic001G527000 Sobic010G208400 Sobic010G208400 Sobic002G301700--Sobic010G208400 Sobic002G353300 Sobic002G353300 Sobic002G301700--Sobic002G353300
Octagon: transcription factors


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