Gene annotation
Transcriptome id Sobic.002G289400.1
Synonym Sb02g032120
Functional annotation serine/threonine-protein kinase receptor precursor, putative, expressed
UniProt A0A1B6QE00
Pfam PF00954 PF08276 PF01453 PF07714
Panther DB PTHR27002 PTHR27002:SF118
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G21390 : S-locus lectin protein kinase family protein
RAP-DB (Rice) LOC_Os09g37834.1 : serine/threonine-protein kinase receptor precursor, putative, expressed
MaizeGDB (Corn) Zm00025a023382 , Zm00025a014511 , Zm00025a005417
Brachypodium KQJ91373 , PNT67417 , KQK15839 , PNT65088
Barley HORVU5Hr1G087240.1 , HORVU6Hr1G032410.2 , HORVU6Hr1G032410.3 , HORVU6Hr1G032410.1 , HORVU2Hr1G117840.22 , HORVU0Hr1G014650.2 , HORVU0Hr1G014650.3 , HORVU0Hr1G014650.1 , HORVU3Hr1G038690.1 , HORVU5Hr1G124170.2 , HORVU5Hr1G124170.3 , HORVU5Hr1G124170.1 , HORVU3Hr1G090180.1 , HORVU3Hr1G090180.3 , HORVU3Hr1G090180.2 , HORVU3Hr1G090180.5 , HORVU3Hr1G090180.4 , HORVU2Hr1G116960.2 , HORVU2Hr1G116960.1
Wheat TraesCS5B02G353400 , TraesCS2A02G537900 , TraesCS2A02G537900 , TraesCS1B02G341600 , TraesCS7A02G456300 , TraesCS3D02G108500 , TraesCS1D02G330300 , TraesCS1D02G330300 , TraesCS1D02G330300 , TraesCS5B02G353300 , TraesCS3B02G435200 , TraesCS3B02G435200 , TraesCS5D02G357800 , TraesCS3A02G402100 , TraesCS5D02G357700 , TraesCS2A02G538200 , TraesCS2A02G538200 , TraesCS2A02G538200 , TraesCS5A02G350800 , TraesCS3D02G316900 , TraesCS2D02G539100 , TraesCS2D02G539100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G233400 Citrate transporter protein, putative, expressed -
2 Sobic.004G023200 Polyketide cyclase/dehydrase and lipid transport superfamily protein(PubMedID : 26465154)@membrane related protein CP5, putative, expressed -
3 Sobic.001G069000 ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
4 Sobic.006G103400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.008G104801 - -
6 Sobic.002G301700 amidase, putative, expressed K01426: E3.5.1.4, amidase
7 Sobic.001G495300 expressed protein -
8 Sobic.002G033800 expressed protein -
9 Sobic.010G241300 -(PubMedID : 26465154)@OsCML29 - Calmodulin-related calcium sensor protein, expressed -
10 Sobic.003G371600 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
11 Sobic.009G164300 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
12 Sobic.004G239100 -(PubMedID : 26465154)@expressed protein -
13 Sobic.009G143100 cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed K02636: cytochrome b6-f complex iron-sulfur subunit
14 Sobic.001G415400 PsbP, putative, expressed -
15 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
16 Sobic.007G004800 Ferredoxin-1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
17 Sobic.002G198600 -(PubMedID : 29017446)@expressed protein -
18 Sobic.004G175500 OsAPx8 - Thylakoid-bound Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
19 Sobic.010G096300 -(PubMedID : 22968911)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GLK genes are members of the GARP superfamily and functions in a BS or M cell-type specific manner to regulate the proplastid to chloroplast transition(PubMedID : 22968911)@myb-like DNA-binding domain containing protein, expressed -
20 Sobic.001G420300 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G289400 Sobic002G289400 Sobic001G233400 Sobic001G233400 Sobic002G289400--Sobic001G233400 Sobic004G023200 Sobic004G023200 Sobic002G289400--Sobic004G023200 Sobic001G069000 Sobic001G069000 Sobic002G289400--Sobic001G069000 Sobic006G103400 Sobic006G103400 Sobic002G289400--Sobic006G103400 Sobic008G104801 Sobic008G104801 Sobic002G289400--Sobic008G104801 Sobic002G301700 Sobic002G301700 Sobic002G289400--Sobic002G301700 Sobic001G495300 Sobic001G495300 Sobic002G289400--Sobic001G495300 Sobic002G033800 Sobic002G033800 Sobic002G289400--Sobic002G033800 Sobic010G241300 Sobic010G241300 Sobic002G289400--Sobic010G241300 Sobic001G233400--Sobic004G023200 Sobic001G233400--Sobic006G103400 Sobic001G536800 Sobic001G536800 Sobic001G233400--Sobic001G536800 Sobic003G137100 Sobic003G137100 Sobic001G233400--Sobic003G137100 Sobic002G385700 Sobic002G385700 Sobic001G233400--Sobic002G385700 Sobic009G196800 Sobic009G196800 Sobic001G233400--Sobic009G196800 Sobic001G233400--Sobic001G069000 Sobic010G096300 Sobic010G096300 Sobic001G233400--Sobic010G096300 Sobic006G060200 Sobic006G060200 Sobic001G233400--Sobic006G060200 Sobic004G023200--Sobic002G033800 Sobic004G343300 Sobic004G343300 Sobic004G023200--Sobic004G343300 Sobic004G023200--Sobic006G103400 Sobic001G448400 Sobic001G448400 Sobic004G023200--Sobic001G448400 Sobic004G249800 Sobic004G249800 Sobic004G023200--Sobic004G249800 Sobic006G234100 Sobic006G234100 Sobic004G023200--Sobic006G234100 Sobic010G109500 Sobic010G109500 Sobic004G023200--Sobic010G109500 Sobic003G132100 Sobic003G132100 Sobic004G023200--Sobic003G132100 Sobic004G035500 Sobic004G035500 Sobic004G023200--Sobic004G035500 Sobic003G412900 Sobic003G412900 Sobic001G069000--Sobic003G412900 Sobic009G125400 Sobic009G125400 Sobic001G069000--Sobic009G125400 Sobic002G098800 Sobic002G098800 Sobic001G069000--Sobic002G098800 Sobic006G010900 Sobic006G010900 Sobic001G069000--Sobic006G010900 Sobic001G069000--Sobic001G536800 Sobic004G308700 Sobic004G308700 Sobic001G069000--Sobic004G308700 Sobic003G387100 Sobic003G387100 Sobic001G069000--Sobic003G387100 Sobic001G314200 Sobic001G314200 Sobic001G069000--Sobic001G314200 Sobic004G272100 Sobic004G272100 Sobic001G069000--Sobic004G272100 Sobic006G103400--Sobic004G343300 Sobic006G103400--Sobic004G023200 Sobic004G175500 Sobic004G175500 Sobic006G103400--Sobic004G175500 Sobic003G197400 Sobic003G197400 Sobic006G103400--Sobic003G197400 Sobic006G103400--Sobic002G033800 Sobic006G103400--Sobic004G249800 Sobic001G041800 Sobic001G041800 Sobic006G103400--Sobic001G041800 Sobic010G241000 Sobic010G241000 Sobic006G103400--Sobic010G241000 Sobic004G235200 Sobic004G235200 Sobic006G103400--Sobic004G235200 Sobic008G104801--Sobic001G233400 Sobic008G104801--Sobic006G060200 Sobic001G217700 Sobic001G217700 Sobic008G104801--Sobic001G217700 Sobic005G084000 Sobic005G084000 Sobic008G104801--Sobic005G084000 Sobic008G104801--Sobic003G137100 Sobic008G104801--Sobic006G103400 Sobic008G104801--Sobic004G023200 Sobic008G104801--Sobic002G289400 Sobic008G104801--Sobic002G301700 Sobic002G301700--Sobic004G023200 Sobic002G301700--Sobic002G033800 Sobic010G019700 Sobic010G019700 Sobic002G301700--Sobic010G019700 Sobic002G301600 Sobic002G301600 Sobic002G301700--Sobic002G301600 Sobic001G379700 Sobic001G379700 Sobic002G301700--Sobic001G379700 Sobic001G308800 Sobic001G308800 Sobic002G301700--Sobic001G308800 Sobic001G527000 Sobic001G527000 Sobic002G301700--Sobic001G527000 Sobic010G208400 Sobic010G208400 Sobic002G301700--Sobic010G208400 Sobic002G353300 Sobic002G353300 Sobic002G301700--Sobic002G353300 Sobic007G210600 Sobic007G210600 Sobic001G495300--Sobic007G210600 Sobic003G074700 Sobic003G074700 Sobic001G495300--Sobic003G074700 Sobic001G495300--Sobic005G084000 Sobic001G495300--Sobic003G137100 Sobic001G495300--Sobic001G041800 Sobic002G109000 Sobic002G109000 Sobic001G495300--Sobic002G109000 Sobic001G099000 Sobic001G099000 Sobic001G495300--Sobic001G099000 Sobic008G131700 Sobic008G131700 Sobic001G495300--Sobic008G131700 Sobic007G201400 Sobic007G201400 Sobic001G495300--Sobic007G201400 Sobic002G033800--Sobic004G343300 Sobic002G033800--Sobic003G132100 Sobic002G033800--Sobic004G023200 Sobic007G071500 Sobic007G071500 Sobic002G033800--Sobic007G071500 Sobic002G152700 Sobic002G152700 Sobic002G033800--Sobic002G152700 Sobic002G033800--Sobic006G103400 Sobic002G033800--Sobic004G175500 Sobic002G033800--Sobic001G448400 Sobic001G029100 Sobic001G029100 Sobic002G033800--Sobic001G029100 Sobic008G183200 Sobic008G183200 Sobic010G241300--Sobic008G183200 Sobic007G059500 Sobic007G059500 Sobic010G241300--Sobic007G059500 Sobic005G127000 Sobic005G127000 Sobic010G241300--Sobic005G127000 Sobic004G122200 Sobic004G122200 Sobic010G241300--Sobic004G122200 Sobic003G397200 Sobic003G397200 Sobic010G241300--Sobic003G397200 Sobic006G010800 Sobic006G010800 Sobic010G241300--Sobic006G010800 Sobic009G034600 Sobic009G034600 Sobic010G241300--Sobic009G034600 Sobic005G111500 Sobic005G111500 Sobic010G241300--Sobic005G111500 Sobic007G213300 Sobic007G213300 Sobic010G241300--Sobic007G213300
Octagon: transcription factors


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