Gene annotation
Transcriptome id Sobic.002G301700.1
Synonym Sb02g033220
Functional annotation amidase, putative, expressed
UniProt C5X8J1
Pfam PF01425
Panther DB PTHR11895 PTHR11895:SF68
NCBI CDD KOG1211; Amidases
KEGG Orthology K01426; E3.5.1.4, amidase
Gene Ontology GO:0016884; carbon-nitrogen ligase activity, with glutamine as amido-N-donor


Orthologs (automatic annotation)
TAIR AT4G34880 : Amidase family protein
RAP-DB (Rice) LOC_Os04g10460.1 : amidase, putative, expressed
MaizeGDB (Corn) Zm00025a048022
Brachypodium -
Barley HORVU5Hr1G087780.10 , HORVU5Hr1G087780.9 , HORVU5Hr1G087780.8 , HORVU5Hr1G087780.5 , HORVU5Hr1G087780.4 , HORVU5Hr1G087780.3 , HORVU5Hr1G087780.2 , HORVU2Hr1G003810.2 , HORVU2Hr1G003810.1
Wheat TraesCS3D02G364700 , TraesCS2D02G027200 , TraesCS3D02G364700
Populus -


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cDNA sequences
Sobic.002G301700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G023200 Polyketide cyclase/dehydrase and lipid transport superfamily protein(PubMedID : 26465154)@membrane related protein CP5, putative, expressed -
2 Sobic.002G033800 expressed protein -
3 Sobic.010G019700 cytochrome P450 86A1, putative, expressed -
4 Sobic.002G301600 amidase, putative, expressed K01426: E3.5.1.4, amidase
5 Sobic.001G379700 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
6 Sobic.001G308800 expressed protein K18065: Cdc25 family phosphatase
7 Sobic.001G527000 PsbP-like protein 1 (At)(PubMedID : 27208977)@Photosystem I subunit P-like protein(PubMedID : 29017446)@PsbP, putative, expressed K02717: photosystem II oxygen-evolving enhancer protein 2
8 Sobic.010G208400 OsProCP2 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
9 Sobic.002G353300 Geranilgeranil pyrophosphate synthetase 1 GGPS1 (Os)(PubMedID : 27208977)@polyprenyl synthetase, putative, expressed K13789: geranylgeranyl diphosphate synthase, type II
10 Sobic.001G198800 -(PubMedID : 26465154)@invertase/pectin methylesterase inhibitor family protein, putative, expressed -
11 Sobic.002G152700 rhodanese-like, putative, expressed -
12 Sobic.004G182700 OsFBK8 - F-box domain and kelch repeat containing protein, expressed -
13 Sobic.001G069000 ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
14 Sobic.001G447700 expressed protein -
15 Sobic.001G415400 PsbP, putative, expressed -
16 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
17 Sobic.008G067200 inhibitor I family protein, putative, expressed -
18 Sobic.001G464700 - -
19 Sobic.003G132100 magnesium-protoporphyrin IX monomethyl ester cyclase,chloroplast precursor, putative, expressed K04035: E1.14.13.81, acsF, magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
20 Sobic.001G221300 alcohol oxidase, putative, expressed K17756: long-chain-alcohol oxidase


Gene co-expression network
sample Sobic002G301700 Sobic002G301700 Sobic004G023200 Sobic004G023200 Sobic002G301700--Sobic004G023200 Sobic002G033800 Sobic002G033800 Sobic002G301700--Sobic002G033800 Sobic010G019700 Sobic010G019700 Sobic002G301700--Sobic010G019700 Sobic002G301600 Sobic002G301600 Sobic002G301700--Sobic002G301600 Sobic001G379700 Sobic001G379700 Sobic002G301700--Sobic001G379700 Sobic001G308800 Sobic001G308800 Sobic002G301700--Sobic001G308800 Sobic001G527000 Sobic001G527000 Sobic002G301700--Sobic001G527000 Sobic010G208400 Sobic010G208400 Sobic002G301700--Sobic010G208400 Sobic002G353300 Sobic002G353300 Sobic002G301700--Sobic002G353300 Sobic004G023200--Sobic002G033800 Sobic004G343300 Sobic004G343300 Sobic004G023200--Sobic004G343300 Sobic006G103400 Sobic006G103400 Sobic004G023200--Sobic006G103400 Sobic001G448400 Sobic001G448400 Sobic004G023200--Sobic001G448400 Sobic004G249800 Sobic004G249800 Sobic004G023200--Sobic004G249800 Sobic006G234100 Sobic006G234100 Sobic004G023200--Sobic006G234100 Sobic010G109500 Sobic010G109500 Sobic004G023200--Sobic010G109500 Sobic003G132100 Sobic003G132100 Sobic004G023200--Sobic003G132100 Sobic004G035500 Sobic004G035500 Sobic004G023200--Sobic004G035500 Sobic002G033800--Sobic004G343300 Sobic002G033800--Sobic003G132100 Sobic002G033800--Sobic004G023200 Sobic007G071500 Sobic007G071500 Sobic002G033800--Sobic007G071500 Sobic002G152700 Sobic002G152700 Sobic002G033800--Sobic002G152700 Sobic002G033800--Sobic006G103400 Sobic004G175500 Sobic004G175500 Sobic002G033800--Sobic004G175500 Sobic002G033800--Sobic001G448400 Sobic001G029100 Sobic001G029100 Sobic002G033800--Sobic001G029100 Sobic009G196800 Sobic009G196800 Sobic010G019700--Sobic009G196800 Sobic010G019700--Sobic004G023200 Sobic004G026300 Sobic004G026300 Sobic010G019700--Sobic004G026300 Sobic003G069100 Sobic003G069100 Sobic010G019700--Sobic003G069100 Sobic002G098800 Sobic002G098800 Sobic010G019700--Sobic002G098800 Sobic007G171600 Sobic007G171600 Sobic010G019700--Sobic007G171600 Sobic003G199800 Sobic003G199800 Sobic010G019700--Sobic003G199800 Sobic001G069000 Sobic001G069000 Sobic010G019700--Sobic001G069000 Sobic002G180400 Sobic002G180400 Sobic010G019700--Sobic002G180400 Sobic002G301600--Sobic002G301700 Sobic005G084000 Sobic005G084000 Sobic002G301600--Sobic005G084000 Sobic010G015800 Sobic010G015800 Sobic002G301600--Sobic010G015800 Sobic007G059500 Sobic007G059500 Sobic002G301600--Sobic007G059500 Sobic006G010800 Sobic006G010800 Sobic002G301600--Sobic006G010800 Sobic008G104801 Sobic008G104801 Sobic002G301600--Sobic008G104801 Sobic008G117800 Sobic008G117800 Sobic002G301600--Sobic008G117800 Sobic001G420300 Sobic001G420300 Sobic002G301600--Sobic001G420300 Sobic008G151000 Sobic008G151000 Sobic002G301600--Sobic008G151000 Sobic001G379700--Sobic001G448400 Sobic001G379700--Sobic003G132100 Sobic003G197400 Sobic003G197400 Sobic001G379700--Sobic003G197400 Sobic001G379700--Sobic004G023200 Sobic001G379700--Sobic002G033800 Sobic001G379700--Sobic002G180400 Sobic001G379700--Sobic001G527000 Sobic001G379700--Sobic004G343300 Sobic009G091850 Sobic009G091850 Sobic001G379700--Sobic009G091850 Sobic001G308800--Sobic001G029100 Sobic009G143100 Sobic009G143100 Sobic001G308800--Sobic009G143100 Sobic001G295300 Sobic001G295300 Sobic001G308800--Sobic001G295300 Sobic001G447700 Sobic001G447700 Sobic001G308800--Sobic001G447700 Sobic001G104800 Sobic001G104800 Sobic001G308800--Sobic001G104800 Sobic001G291900 Sobic001G291900 Sobic001G308800--Sobic001G291900 Sobic001G308800--Sobic002G033800 Sobic004G183100 Sobic004G183100 Sobic001G308800--Sobic004G183100 Sobic009G030900 Sobic009G030900 Sobic001G308800--Sobic009G030900 Sobic001G527000--Sobic009G091850 Sobic007G004600 Sobic007G004600 Sobic001G527000--Sobic007G004600 Sobic001G527000--Sobic002G152700 Sobic001G415400 Sobic001G415400 Sobic001G527000--Sobic001G415400 Sobic005G123200 Sobic005G123200 Sobic001G527000--Sobic005G123200 Sobic010G277600 Sobic010G277600 Sobic001G527000--Sobic010G277600 Sobic009G183700 Sobic009G183700 Sobic001G527000--Sobic009G183700 Sobic001G527000--Sobic009G030900 Sobic007G143700 Sobic007G143700 Sobic001G527000--Sobic007G143700 Sobic010G208400--Sobic001G308800 Sobic010G208400--Sobic002G301700 Sobic001G023700 Sobic001G023700 Sobic010G208400--Sobic001G023700 Sobic010G208400--Sobic002G033800 Sobic003G008900 Sobic003G008900 Sobic010G208400--Sobic003G008900 Sobic010G208400--Sobic002G353300 Sobic010G208400--Sobic009G143100 Sobic010G208400--Sobic001G447700 Sobic010G208400--Sobic001G295300 Sobic001G122400 Sobic001G122400 Sobic002G353300--Sobic001G122400 Sobic003G324700 Sobic003G324700 Sobic002G353300--Sobic003G324700 Sobic003G386300 Sobic003G386300 Sobic002G353300--Sobic003G386300 Sobic004G311100 Sobic004G311100 Sobic002G353300--Sobic004G311100 Sobic004G335800 Sobic004G335800 Sobic002G353300--Sobic004G335800 Sobic002G353300--Sobic001G291900 Sobic004G044200 Sobic004G044200 Sobic002G353300--Sobic004G044200 Sobic001G527100 Sobic001G527100 Sobic002G353300--Sobic001G527100 Sobic002G198000 Sobic002G198000 Sobic002G353300--Sobic002G198000
Octagon: transcription factors


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