Gene annotation
| Transcriptome id | Sobic.007G221400.1 |
|---|---|
| Synonym | Sb07g028740, ATOPT1, OPT1 |
| Functional annotation | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543) oligopeptide transporter, putative, expressed |
| UniProt | C5YJC7 |
| Pfam | PF03169 |
| Panther DB | PTHR22601 PTHR22601:SF8 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT4G26590 : oligopeptide transporter 5 |
|---|---|
| RAP-DB (Rice) | LOC_Os08g38400.1 : oligopeptide transporter, putative, expressed |
| MaizeGDB (Corn) | Zm00025a004972 , Zm00025a050234 , Zm00025a032712 |
| Brachypodium | KQJ98781 , PNT68339 , PNT74131 , KQK13179 , PNT74132 , KQK13178 , KQJ96062 |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
| Sobic.007G221400 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G071750 | - | - |
| 2 | Sobic.008G117300 | Glutaredoxin family protein (At)(PubMedID : 27208977)@OsGrx_C12 - glutaredoxin subgroup III, expressed | K03676: grxC, GLRX, glutaredoxin 3 |
| 3 | Sobic.005G204000 | OsGrx_C17 - glutaredoxin subgroup III, expressed | K03676: grxC, GLRX, glutaredoxin 3 |
| 4 | Sobic.001G066600 | mTERF domain containing protein, expressed | - |
| 5 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 6 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 7 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 8 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 9 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 10 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 11 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 12 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 13 | Sobic.001G160700 | integral membrane protein DUF6 containing protein, expressed | - |
| 14 | Sobic.010G146100 | aquaporin protein, putative, expressed | K09873: aquaporin TIP |
| 15 | Sobic.006G026800 | inorganic phosphate transporter, putative, expressed | K08176: MFS transporter, PHS family, inorganic phosphate transporter |
| 16 | Sobic.009G165200 | plant-specific domain TIGR01589 family protein, expressed | - |
| 17 | Sobic.004G170100 | - | - |
| 18 | Sobic.002G102900 | uncharacterized protein PA4923, putative, expressed | - |
| 19 | Sobic.002G048501 | - | - |
| 20 | Sobic.005G099700 | expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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