Gene annotation
Transcriptome id Sobic.010G146100.1
Synonym 1, TIP2, AQP1, ATTIP2, Sb10g019360, DELTA-TIP, DELTA-TIP1
Functional annotation aquaporin protein, putative, expressed
UniProt C5Z347
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF99
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09873; aquaporin TIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT3G16240 : delta tonoplast integral protein
RAP-DB (Rice) LOC_Os06g22960.1 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a039037 , Zm00025a010306 , Zm00025a020879 , Zm00025a056873 , Zm00025a032208
Brachypodium KQK11808 , KQJ83938
Barley HORVU7Hr1G081770.8 , HORVU7Hr1G081770.9 , HORVU7Hr1G081770.4 , HORVU7Hr1G081770.7 , HORVU7Hr1G081770.1 , HORVU7Hr1G081770.3 , HORVU2Hr1G097780.5 , HORVU2Hr1G097780.4 , HORVU2Hr1G097780.3 , HORVU2Hr1G097780.2 , HORVU2Hr1G097780.1 , HORVU3Hr1G116790.1 , HORVU4Hr1G079230.4 , HORVU3Hr1G116790.3 , HORVU3Hr1G116790.2 , HORVU4Hr1G079230.1 , HORVU3Hr1G116790.4 , HORVU4Hr1G079230.2 , HORVU3Hr1G116790.9 , HORVU3Hr1G116790.5 , HORVU3Hr1G116790.6 , HORVU3Hr1G116790.12
Wheat TraesCS6D02G232100 , TraesCS7A02G331300 , TraesCS7D02G339600 , TraesCS7D02G339600 , TraesCS7D02G339600 , TraesCS2A02G414100 , TraesCS3D02G540900 , TraesCS3A02G535300 , TraesCS6A02G250300 , TraesCS2D02G411400 , TraesCS3B02G608500 , TraesCS2B02G433200 , TraesCS7B02G243000 , TraesCS7B02G243000
Populus PNT43724 , PNT43725


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cDNA sequences
Sobic.010G146100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G071750 - -
2 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
3 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
4 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
5 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
6 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
7 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
8 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
9 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
10 Sobic.001G160700 integral membrane protein DUF6 containing protein, expressed -
11 Sobic.008G117300 Glutaredoxin family protein (At)(PubMedID : 27208977)@OsGrx_C12 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
12 Sobic.005G204000 OsGrx_C17 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
13 Sobic.007G221400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptide transporter, putative, expressed -
14 Sobic.006G026800 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
15 Sobic.001G066600 mTERF domain containing protein, expressed -
16 Sobic.004G170100 - -
17 Sobic.010G156700 zinc finger, C3HC4 type domain containing protein, expressed K19038: E3 ubiquitin-protein ligase ATL41
18 Sobic.009G165200 plant-specific domain TIGR01589 family protein, expressed -
19 Sobic.001G268850 - -
20 Sobic.002G048501 - -


Gene co-expression network
sample Sobic010G146100 Sobic010G146100 Sobic004G071750 Sobic004G071750 Sobic010G146100--Sobic004G071750 Sobic001G160700 Sobic001G160700 Sobic010G146100--Sobic001G160700 Sobic004G071750--Sobic001G160700 Sobic001G160700--Sobic001G160700 Sobic001G160700--Sobic004G071750
Octagon: transcription factors


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